RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 SAFBQ15424 915 aaKnown RBP eCLIP20.78■□□□□ 0.92
VARS2-206ENST00000473916 NPY5RQ15761 445 aa20.78■□□□□ 0.92
VARS2-206ENST00000473916 CKAP2LQ8IYA6 745 aa20.78■□□□□ 0.92
VARS2-206ENST00000473916 FUCA2Q9BTY2 467 aa20.78■□□□□ 0.92
VARS2-206ENST00000473916 CYTH3O43739 400 aa20.78■□□□□ 0.92
VARS2-206ENST00000473916 TGFB2P61812 414 aa20.78■□□□□ 0.92
VARS2-206ENST00000473916 RSBN1LQ6PCB5 846 aaPredicted RBP20.78■□□□□ 0.92
VARS2-206ENST00000473916 FSIP1Q8NA03 581 aa20.78■□□□□ 0.92
VARS2-206ENST00000473916 IDI2Q9BXS1 227 aa20.78■□□□□ 0.92
VARS2-206ENST00000473916 FOXP1Q9H334 677 aaPredicted RBP20.78■□□□□ 0.92
VARS2-206ENST00000473916 CLSTN2Q9H4D0 955 aa20.78■□□□□ 0.92
VARS2-206ENST00000473916 SCG2P13521 617 aa20.77■□□□□ 0.92
VARS2-206ENST00000473916 SNW1Q13573 536 aaKnown RBP20.77■□□□□ 0.92
VARS2-206ENST00000473916 GRIPAP1Q4V328 841 aa20.77■□□□□ 0.92
VARS2-206ENST00000473916 USP17L2Q6R6M4 530 aa20.77■□□□□ 0.92
VARS2-206ENST00000473916 KCNG4Q8TDN1 519 aa20.77■□□□□ 0.92
VARS2-206ENST00000473916 GPKOWQ92917 476 aaPredicted RBP eCLIP20.77■□□□□ 0.927e-6■■■■■ 33.4
VARS2-206ENST00000473916 MTMR4Q9NYA4 1195 aa20.77■□□□□ 0.92
VARS2-206ENST00000473916 IGKV6D-41A0A0C4DH26 115 aa20.77■□□□□ 0.91
VARS2-206ENST00000473916 A0A1B0GVL5 298 aa20.77■□□□□ 0.91
VARS2-206ENST00000473916 PALM3A6NDB9 673 aaPredicted RBP20.77■□□□□ 0.91
VARS2-206ENST00000473916 HLA-DOAP06340 250 aa20.77■□□□□ 0.91
VARS2-206ENST00000473916 NOVP48745 357 aa20.77■□□□□ 0.91
VARS2-206ENST00000473916 SLC39A14Q15043 492 aa20.77■□□□□ 0.91
VARS2-206ENST00000473916 PFKFB3Q16875 520 aaPredicted RBP20.77■□□□□ 0.91
VARS2-206ENST00000473916 LRRC47Q8N1G4 583 aaKnown RBP20.77■□□□□ 0.91
VARS2-206ENST00000473916 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.76■□□□□ 0.91
VARS2-206ENST00000473916 VIL1P09327 827 aaKnown RBP20.76■□□□□ 0.91
VARS2-206ENST00000473916 DALRD3Q5D0E6 543 aaKnown RBP20.76■□□□□ 0.91
VARS2-206ENST00000473916 AXDND1Q5T1B0 1012 aaPredicted RBP20.76■□□□□ 0.91
VARS2-206ENST00000473916 ADALQ6DHV7 355 aa20.76■□□□□ 0.91
VARS2-206ENST00000473916 ZSCAN29Q8IWY8 852 aaPredicted RBP20.76■□□□□ 0.91
VARS2-206ENST00000473916 ENGASEQ8NFI3 743 aa20.76■□□□□ 0.91
VARS2-206ENST00000473916 GMLQ99445 158 aa20.76■□□□□ 0.91
VARS2-206ENST00000473916 TNMDQ9H2S6 317 aa20.76■□□□□ 0.91
VARS2-206ENST00000473916 DDX19AQ9NUU7 478 aaKnown RBP20.76■□□□□ 0.91
VARS2-206ENST00000473916 LETM1O95202 739 aaPredicted RBP20.75■□□□□ 0.91
VARS2-206ENST00000473916 TOP1P11387 765 aaKnown RBP20.75■□□□□ 0.91
VARS2-206ENST00000473916 ATP2B1P20020 1258 aa20.75■□□□□ 0.91
VARS2-206ENST00000473916 SGIP1Q9BQI5 828 aa20.75■□□□□ 0.91
VARS2-206ENST00000473916 CABP5Q9NP86 173 aa20.75■□□□□ 0.91
VARS2-206ENST00000473916 SWAP70Q9UH65 585 aa20.75■□□□□ 0.91
VARS2-206ENST00000473916 USP17L5A8MUK1 530 aa20.75■□□□□ 0.91
VARS2-206ENST00000473916 MAP3K11Q16584 847 aa20.75■□□□□ 0.91
VARS2-206ENST00000473916 TYW1BQ6NUM6 668 aa20.75■□□□□ 0.91
VARS2-206ENST00000473916 MRPS27Q92552 414 aaKnown RBP20.75■□□□□ 0.91
VARS2-206ENST00000473916 PCDHB6Q9Y5E3 794 aa20.75■□□□□ 0.91
VARS2-206ENST00000473916 CLRN2A0PK11 232 aa20.74■□□□□ 0.91
VARS2-206ENST00000473916 MPHOSPH10O00566 681 aaKnown RBP20.74■□□□□ 0.91
VARS2-206ENST00000473916 WNT7AO00755 349 aa20.74■□□□□ 0.91
VARS2-206ENST00000473916 XBP1P17861 261 aa20.74■□□□□ 0.91
VARS2-206ENST00000473916 KRT2P35908 639 aa20.74■□□□□ 0.91
VARS2-206ENST00000473916 NDUFA8P51970 172 aa20.74■□□□□ 0.91
VARS2-206ENST00000473916 CLIC6Q96NY7 704 aa20.74■□□□□ 0.91
VARS2-206ENST00000473916 EHD4Q9H223 541 aa20.74■□□□□ 0.91
VARS2-206ENST00000473916 KLRF2D3W0D1 207 aa20.73■□□□□ 0.91
VARS2-206ENST00000473916 FAM160A1Q05DH4 1040 aa20.73■□□□□ 0.91
VARS2-206ENST00000473916 CCDC73Q6ZRK6 1079 aa20.73■□□□□ 0.91
VARS2-206ENST00000473916 NIM1KQ8IY84 436 aa20.73■□□□□ 0.91
VARS2-206ENST00000473916 TNFRSF25Q93038 417 aa20.73■□□□□ 0.91
VARS2-206ENST00000473916 CLIP2Q9UDT6 1046 aa20.73■□□□□ 0.91
VARS2-206ENST00000473916 MRVI1Q9Y6F6 885 aa20.73■□□□□ 0.91
VARS2-206ENST00000473916 FRMPD2Q68DX3 1309 aaPredicted RBP20.73■□□□□ 0.91
VARS2-206ENST00000473916 A0A1W2PQ27 194 aa20.73■□□□□ 0.91
VARS2-206ENST00000473916 A0A1W2PQ64 194 aa20.73■□□□□ 0.91
VARS2-206ENST00000473916 A0A1W2PQD8 194 aa20.73■□□□□ 0.91
VARS2-206ENST00000473916 NFKBIEO00221 500 aa20.73■□□□□ 0.91
VARS2-206ENST00000473916 ZNRF3Q9ULT6 936 aa20.73■□□□□ 0.91
VARS2-206ENST00000473916 SHTN1A0MZ66 631 aa20.72■□□□□ 0.91
VARS2-206ENST00000473916 SPDYE2BA6NHP3 402 aa20.72■□□□□ 0.91
VARS2-206ENST00000473916 PARP1P09874 1014 aaKnown RBP20.72■□□□□ 0.91
VARS2-206ENST00000473916 SPDYE6P0CI01 402 aa20.72■□□□□ 0.91
VARS2-206ENST00000473916 RBM43Q6ZSC3 357 aaKnown RBP20.72■□□□□ 0.91
VARS2-206ENST00000473916 FMR1NBQ8N0W7 255 aaPredicted RBP20.72■□□□□ 0.91
VARS2-206ENST00000473916 TCP10L2B9ZVM9 353 aa20.71■□□□□ 0.91
VARS2-206ENST00000473916 PDHBP11177 359 aa20.71■□□□□ 0.91
VARS2-206ENST00000473916 GRIN1Q05586 938 aa20.71■□□□□ 0.91
VARS2-206ENST00000473916 CXCL9Q07325 125 aa20.71■□□□□ 0.91
VARS2-206ENST00000473916 SOGA3Q5TF21 947 aa20.71■□□□□ 0.91
VARS2-206ENST00000473916 WWC2Q6AWC2 1192 aa20.71■□□□□ 0.91
VARS2-206ENST00000473916 ERCC4Q92889 916 aaPredicted RBP20.71■□□□□ 0.91
VARS2-206ENST00000473916 UBA5Q9GZZ9 404 aa20.71■□□□□ 0.91
VARS2-206ENST00000473916 TAOK3Q9H2K8 898 aa20.71■□□□□ 0.91
VARS2-206ENST00000473916 DHX36Q9H2U1 1008 aaKnown RBP20.71■□□□□ 0.91
VARS2-206ENST00000473916 PI4KBQ9UBF8 816 aa20.71■□□□□ 0.91
VARS2-206ENST00000473916 MYO3BQ8WXR4 1341 aa20.71■□□□□ 0.91
VARS2-206ENST00000473916 GNAQP50148 359 aa20.71■□□□□ 0.91
VARS2-206ENST00000473916 NLRP5P59047 1200 aa20.71■□□□□ 0.91
VARS2-206ENST00000473916 SHC4Q6S5L8 630 aa20.71■□□□□ 0.91
VARS2-206ENST00000473916 UPF1Q92900 1129 aaKnown RBP eCLIP20.71■□□□□ 0.91
VARS2-206ENST00000473916 PTGER2P43116 358 aa20.7■□□□□ 0.9
VARS2-206ENST00000473916 ATP2B2Q01814 1243 aa20.7■□□□□ 0.9
VARS2-206ENST00000473916 RILPL1Q5EBL4 403 aa20.7■□□□□ 0.9
VARS2-206ENST00000473916 BCS1LQ9Y276 419 aa20.7■□□□□ 0.9
VARS2-206ENST00000473916 PPP6R2O75170 966 aa20.7■□□□□ 0.9
VARS2-206ENST00000473916 TTLL1O95922 423 aa20.7■□□□□ 0.9
VARS2-206ENST00000473916 PFKFB1P16118 471 aa20.7■□□□□ 0.9
VARS2-206ENST00000473916 TYRO3Q06418 890 aa20.7■□□□□ 0.9
VARS2-206ENST00000473916 HEATR3Q7Z4Q2 680 aa20.7■□□□□ 0.9
VARS2-206ENST00000473916 HOMER1Q86YM7 354 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms