RNA–Protein interactions for RNA: ENST00000473221.5

APTX-217, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 687 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-217ENST00000473221 FAM177A1Q8N128 213 aaPredicted RBP11.72□□□□□ -0.53
APTX-217ENST00000473221 TMEM87AQ8NBN3 555 aa11.72□□□□□ -0.53
APTX-217ENST00000473221 PHKBQ93100 1093 aa11.72□□□□□ -0.53
APTX-217ENST00000473221 MKL1Q969V6 931 aa11.72□□□□□ -0.53
APTX-217ENST00000473221 CSRNP1Q96S65 589 aa11.72□□□□□ -0.53
APTX-217ENST00000473221 DNAJC18Q9H819 358 aa11.72□□□□□ -0.53
APTX-217ENST00000473221 KANSL2Q9H9L4 492 aa11.72□□□□□ -0.53
APTX-217ENST00000473221 GJA3Q9Y6H8 435 aa11.72□□□□□ -0.53
APTX-217ENST00000473221 ZNF541Q9H0D2 1346 aa11.71□□□□□ -0.53
APTX-217ENST00000473221 XBP1P17861 261 aa11.71□□□□□ -0.53
APTX-217ENST00000473221 KRT85P78386 507 aa11.71□□□□□ -0.53
APTX-217ENST00000473221 NBPF9Q3BBW0 867 aa11.71□□□□□ -0.53
APTX-217ENST00000473221 TMEM179Q6ZVK1 233 aa11.71□□□□□ -0.53
APTX-217ENST00000473221 BRAPQ7Z569 592 aa11.71□□□□□ -0.53
APTX-217ENST00000473221 VEZTQ9HBM0 779 aa11.71□□□□□ -0.53
APTX-217ENST00000473221 LMBRD1Q9NUN5 540 aa11.71□□□□□ -0.53
APTX-217ENST00000473221 NYAP2Q9P242 653 aa11.71□□□□□ -0.53
APTX-217ENST00000473221 PCDH10Q9P2E7 1040 aa11.71□□□□□ -0.53
APTX-217ENST00000473221 PGAP2Q9UHJ9 254 aa11.71□□□□□ -0.53
APTX-217ENST00000473221 CFAP45Q9UL16 551 aa11.71□□□□□ -0.53
APTX-217ENST00000473221 SYNPO2Q9UMS6 1093 aa11.71□□□□□ -0.53
APTX-217ENST00000473221 CNTNAP5Q8WYK1 1306 aa11.7□□□□□ -0.54
APTX-217ENST00000473221 TRAK2O60296 914 aa11.7□□□□□ -0.54
APTX-217ENST00000473221 PARP1P09874 1014 aaKnown RBP11.7□□□□□ -0.54
APTX-217ENST00000473221 ABCB5Q2M3G0 1257 aa11.7□□□□□ -0.54
APTX-217ENST00000473221 RBM26Q5T8P6 1007 aaKnown RBP11.7□□□□□ -0.54
APTX-217ENST00000473221 KRT40Q6A162 431 aa11.7□□□□□ -0.54
APTX-217ENST00000473221 FERMT3Q86UX7 667 aa11.7□□□□□ -0.54
APTX-217ENST00000473221 SRBD1Q8N5C6 995 aaKnown RBP11.7□□□□□ -0.54
APTX-217ENST00000473221 ZNF396Q96N95 335 aaPredicted RBP11.7□□□□□ -0.54
APTX-217ENST00000473221 SCAND2PQ9GZW5 306 aaPredicted RBP11.7□□□□□ -0.54
APTX-217ENST00000473221 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.7□□□□□ -0.54
APTX-217ENST00000473221 CABP5Q9NP86 173 aa11.7□□□□□ -0.54
APTX-217ENST00000473221 GPRC5DQ9NZD1 345 aa11.7□□□□□ -0.54
APTX-217ENST00000473221 MAD2L2Q9UI95 211 aa11.7□□□□□ -0.54
APTX-217ENST00000473221 MPHOSPH10O00566 681 aaKnown RBP11.69□□□□□ -0.54
APTX-217ENST00000473221 PRPF40AO75400 957 aaKnown RBP11.69□□□□□ -0.54
APTX-217ENST00000473221 PLEKHA8P1O95397 391 aa11.69□□□□□ -0.54
APTX-217ENST00000473221 SNHG28P0DPA3 235 aa11.69□□□□□ -0.54
APTX-217ENST00000473221 NCLP19338 710 aaKnown RBP11.69□□□□□ -0.54
APTX-217ENST00000473221 DNM1Q05193 864 aaKnown RBP11.69□□□□□ -0.54
APTX-217ENST00000473221 SAFBQ15424 915 aaKnown RBP eCLIP11.69□□□□□ -0.54
APTX-217ENST00000473221 KIF4BQ2VIQ3 1234 aa11.69□□□□□ -0.54
APTX-217ENST00000473221 ASPRV1Q53RT3 343 aa11.69□□□□□ -0.54
APTX-217ENST00000473221 HOOK2Q96ED9 719 aa11.69□□□□□ -0.54
APTX-217ENST00000473221 GINM1Q9NU53 330 aa11.69□□□□□ -0.54
APTX-217ENST00000473221 CLIP2Q9UDT6 1046 aa11.69□□□□□ -0.54
APTX-217ENST00000473221 ELP1O95163 1332 aa11.68□□□□□ -0.54
APTX-217ENST00000473221 ZC3H4Q9UPT8 1303 aaKnown RBP11.68□□□□□ -0.54
APTX-217ENST00000473221 SHTN1A0MZ66 631 aa11.68□□□□□ -0.54
APTX-217ENST00000473221 PPFIA3O75145 1194 aa11.68□□□□□ -0.54
APTX-217ENST00000473221 MBD3O95983 291 aa11.68□□□□□ -0.54
APTX-217ENST00000473221 MMP1P03956 469 aa11.68□□□□□ -0.54
APTX-217ENST00000473221 PDHBP11177 359 aa11.68□□□□□ -0.54
APTX-217ENST00000473221 KIF23Q02241 960 aaPredicted RBP11.68□□□□□ -0.54
APTX-217ENST00000473221 RASA3Q14644 834 aa11.68□□□□□ -0.54
APTX-217ENST00000473221 PKN1Q16512 942 aa11.68□□□□□ -0.54
APTX-217ENST00000473221 PFKFB3Q16875 520 aaPredicted RBP11.68□□□□□ -0.54
APTX-217ENST00000473221 KLHL40Q2TBA0 621 aa11.68□□□□□ -0.54
APTX-217ENST00000473221 SAMD7Q7Z3H4 446 aa11.68□□□□□ -0.54
APTX-217ENST00000473221 APOBEC3FQ8IUX4 373 aaKnown RBP11.68□□□□□ -0.54
APTX-217ENST00000473221 CCDC82Q8N4S0 544 aa11.68□□□□□ -0.54
APTX-217ENST00000473221 SPZ1Q9BXG8 430 aa11.68□□□□□ -0.54
APTX-217ENST00000473221 SH3GLB2Q9NR46 395 aa11.68□□□□□ -0.54
APTX-217ENST00000473221 RNF181Q9P0P0 153 aa11.68□□□□□ -0.54
APTX-217ENST00000473221 CNPY2Q9Y2B0 182 aa11.68□□□□□ -0.54
APTX-217ENST00000473221 V9GY48 417 aaPredicted RBP11.68□□□□□ -0.54
APTX-217ENST00000473221 FAM196BA6NMK8 535 aa11.67□□□□□ -0.54
APTX-217ENST00000473221 KLRF2D3W0D1 207 aa11.67□□□□□ -0.54
APTX-217ENST00000473221 HSPA1AP0DMV8 641 aaKnown RBP11.67□□□□□ -0.54
APTX-217ENST00000473221 HSPA1BP0DMV9 641 aaKnown RBP11.67□□□□□ -0.54
APTX-217ENST00000473221 SCG2P13521 617 aa11.67□□□□□ -0.54
APTX-217ENST00000473221 U2AF2P26368 475 aaKnown RBP eCLIP11.67□□□□□ -0.549e-15■■■■■ 42.9
APTX-217ENST00000473221 GUCY1A2P33402 732 aa11.67□□□□□ -0.54
APTX-217ENST00000473221 GUCY1B3Q02153 619 aa11.67□□□□□ -0.54
APTX-217ENST00000473221 TBC1D10BQ4KMP7 808 aaPredicted RBP11.67□□□□□ -0.54
APTX-217ENST00000473221 GPATCH4Q5T3I0 446 aaKnown RBP11.67□□□□□ -0.54
APTX-217ENST00000473221 C9orf131Q5VYM1 1079 aa11.67□□□□□ -0.54
APTX-217ENST00000473221 DPY19L2Q6NUT2 758 aa11.67□□□□□ -0.54
APTX-217ENST00000473221 USP48Q86UV5 1035 aa11.67□□□□□ -0.54
APTX-217ENST00000473221 CMTR1Q8N1G2 835 aaKnown RBP11.67□□□□□ -0.54
APTX-217ENST00000473221 STAG2Q8N3U4 1231 aa11.67□□□□□ -0.54
APTX-217ENST00000473221 DCAF4Q8WV16 495 aa11.67□□□□□ -0.54
APTX-217ENST00000473221 TEPSINQ96N21 525 aa11.67□□□□□ -0.54
APTX-217ENST00000473221 AIFM3Q96NN9 605 aa11.67□□□□□ -0.54
APTX-217ENST00000473221 TMEM39BQ9GZU3 492 aa11.67□□□□□ -0.54
APTX-217ENST00000473221 FOXP1Q9H334 677 aaPredicted RBP11.67□□□□□ -0.54
APTX-217ENST00000473221 HACL1Q9UJ83 578 aa11.67□□□□□ -0.54
APTX-217ENST00000473221 PPP2R3BQ9Y5P8 575 aa11.67□□□□□ -0.54
APTX-217ENST00000473221 DDX49Q9Y6V7 483 aaKnown RBP11.67□□□□□ -0.54
APTX-217ENST00000473221 PITPNM2Q9BZ72 1349 aa11.66□□□□□ -0.54
APTX-217ENST00000473221 ATAD5Q96QE3 1844 aa11.66□□□□□ -0.54
APTX-217ENST00000473221 EGFRP00533 1210 aa11.66□□□□□ -0.54
APTX-217ENST00000473221 EEF2P13639 858 aaKnown RBP11.66□□□□□ -0.54
APTX-217ENST00000473221 LMOD1P29536 600 aaPredicted RBP11.66□□□□□ -0.54
APTX-217ENST00000473221 FOSBP53539 338 aa11.66□□□□□ -0.54
APTX-217ENST00000473221 UBE2HP62256 183 aa11.66□□□□□ -0.54
APTX-217ENST00000473221 ICA1Q05084 483 aa11.66□□□□□ -0.54
APTX-217ENST00000473221 SEPT2Q15019 361 aa11.66□□□□□ -0.54
APTX-217ENST00000473221 FOXD4L6Q3SYB3 417 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms