RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 HCN4Q9Y3Q4 1203 aa8.43□□□□□ -1.06
HDAC1-204ENST00000471488 A0A1W2PQ45 241 aaPredicted RBP8.42□□□□□ -1.06
HDAC1-204ENST00000471488 A0A1W2PQY0 241 aa8.42□□□□□ -1.06
HDAC1-204ENST00000471488 SPDYE16A6NNV3 312 aaPredicted RBP8.42□□□□□ -1.06
HDAC1-204ENST00000471488 ERCC3P19447 782 aa8.42□□□□□ -1.06
HDAC1-204ENST00000471488 MCAMP43121 646 aa8.42□□□□□ -1.06
HDAC1-204ENST00000471488 SLC4A3P48751 1232 aa8.42□□□□□ -1.06
HDAC1-204ENST00000471488 OS9Q13438 667 aaPredicted RBP8.42□□□□□ -1.06
HDAC1-204ENST00000471488 CDCA7LQ96GN5 454 aa8.42□□□□□ -1.06
HDAC1-204ENST00000471488 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.42□□□□□ -1.062e-18■■□□□ 12.6
HDAC1-204ENST00000471488 PBX4Q9BYU1 374 aa8.42□□□□□ -1.06
HDAC1-204ENST00000471488 PPP1R12CQ9BZL4 782 aa8.42□□□□□ -1.06
HDAC1-204ENST00000471488 STARD7Q9NQZ5 370 aa8.42□□□□□ -1.06
HDAC1-204ENST00000471488 MSRAQ9UJ68 235 aa8.42□□□□□ -1.06
HDAC1-204ENST00000471488 HDAC5Q9UQL6 1122 aa8.42□□□□□ -1.06
HDAC1-204ENST00000471488 PDS5AQ29RF7 1337 aaKnown RBP8.42□□□□□ -1.06
HDAC1-204ENST00000471488 RLFQ13129 1914 aa8.41□□□□□ -1.06
HDAC1-204ENST00000471488 COBLO75128 1261 aa8.41□□□□□ -1.06
HDAC1-204ENST00000471488 PGK2P07205 417 aa8.41□□□□□ -1.06
HDAC1-204ENST00000471488 HOXC6P09630 235 aa8.41□□□□□ -1.06
HDAC1-204ENST00000471488 UQCRFS1P1P0C7P4 283 aa8.41□□□□□ -1.06
HDAC1-204ENST00000471488 CYP7A1P22680 504 aa8.41□□□□□ -1.06
HDAC1-204ENST00000471488 TFF2Q03403 129 aa8.41□□□□□ -1.06
HDAC1-204ENST00000471488 G3BP1Q13283 466 aaKnown RBP eCLIP8.41□□□□□ -1.061e-8■□□□□ 10.1
HDAC1-204ENST00000471488 SNX17Q15036 470 aa8.41□□□□□ -1.06
HDAC1-204ENST00000471488 OLFML2BQ68BL8 750 aa8.41□□□□□ -1.06
HDAC1-204ENST00000471488 CCDC174Q6PII3 467 aa8.41□□□□□ -1.06
HDAC1-204ENST00000471488 ADGRA1Q86SQ6 560 aa8.41□□□□□ -1.06
HDAC1-204ENST00000471488 SPICE1Q8N0Z3 855 aa8.41□□□□□ -1.06
HDAC1-204ENST00000471488 MEIS3Q99687 375 aa8.41□□□□□ -1.06
HDAC1-204ENST00000471488 C1QTNF1Q9BXJ1 281 aa8.41□□□□□ -1.06
HDAC1-204ENST00000471488 SPATC1LQ9H0A9 340 aa8.41□□□□□ -1.06
HDAC1-204ENST00000471488 BCL11AQ9H165 835 aa8.41□□□□□ -1.06
HDAC1-204ENST00000471488 NKX2-4Q9H2Z4 354 aa8.41□□□□□ -1.06
HDAC1-204ENST00000471488 COPRSQ9NQ92 184 aa8.41□□□□□ -1.06
HDAC1-204ENST00000471488 GINM1Q9NU53 330 aa8.41□□□□□ -1.06
HDAC1-204ENST00000471488 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.41□□□□□ -1.06
HDAC1-204ENST00000471488 TTC28Q96AY4 2481 aa8.41□□□□□ -1.06
HDAC1-204ENST00000471488 KIAA0355O15063 1070 aa8.4□□□□□ -1.06
HDAC1-204ENST00000471488 STRNO43815 780 aa8.4□□□□□ -1.06
HDAC1-204ENST00000471488 IDH1O75874 414 aaKnown RBP8.4□□□□□ -1.06
HDAC1-204ENST00000471488 FLOT1O75955 427 aa8.4□□□□□ -1.06
HDAC1-204ENST00000471488 POLR3DP05423 398 aaPredicted RBP8.4□□□□□ -1.06
HDAC1-204ENST00000471488 FCER1AP12319 257 aa8.4□□□□□ -1.06
HDAC1-204ENST00000471488 CSF2RAP15509 400 aa8.4□□□□□ -1.06
HDAC1-204ENST00000471488 TAL1P17542 331 aaPredicted RBP8.4□□□□□ -1.06
HDAC1-204ENST00000471488 ARID4AP29374 1257 aaPredicted RBP8.4□□□□□ -1.06
HDAC1-204ENST00000471488 COG2Q14746 738 aa8.4□□□□□ -1.06
HDAC1-204ENST00000471488 SEPT2Q15019 361 aa8.4□□□□□ -1.06
HDAC1-204ENST00000471488 CCDC158Q5M9N0 1113 aa8.4□□□□□ -1.06
HDAC1-204ENST00000471488 NUP133Q8WUM0 1156 aa8.4□□□□□ -1.06
HDAC1-204ENST00000471488 MAML3Q96JK9 1138 aa8.4□□□□□ -1.06
HDAC1-204ENST00000471488 C12orf42Q96LP6 360 aa8.4□□□□□ -1.06
HDAC1-204ENST00000471488 MMP19Q99542 508 aa8.4□□□□□ -1.06
HDAC1-204ENST00000471488 KIAA1683Q9H0B3 1180 aa8.4□□□□□ -1.06
HDAC1-204ENST00000471488 SLC28A3Q9HAS3 691 aa8.4□□□□□ -1.06
HDAC1-204ENST00000471488 SERPINB13Q9UIV8 391 aa8.4□□□□□ -1.06
HDAC1-204ENST00000471488 ZHX1Q9UKY1 873 aaPredicted RBP8.4□□□□□ -1.06
HDAC1-204ENST00000471488 NOB1Q9ULX3 412 aaKnown RBP8.4□□□□□ -1.06
HDAC1-204ENST00000471488 PHF24Q9UPV7 400 aa8.4□□□□□ -1.06
HDAC1-204ENST00000471488 CNPY2Q9Y2B0 182 aa8.4□□□□□ -1.06
HDAC1-204ENST00000471488 SIPA1L1O43166 1804 aa8.4□□□□□ -1.07
HDAC1-204ENST00000471488 TCF20Q9UGU0 1960 aaKnown RBP8.39□□□□□ -1.07
HDAC1-204ENST00000471488 FAM86C2PA6NEL3 165 aa8.39□□□□□ -1.07
HDAC1-204ENST00000471488 ZBBXA8MT70 800 aa8.39□□□□□ -1.07
HDAC1-204ENST00000471488 ANP32CO43423 234 aa8.39□□□□□ -1.07
HDAC1-204ENST00000471488 TIMP1P01033 207 aa8.39□□□□□ -1.07
HDAC1-204ENST00000471488 KCNQ1P51787 676 aa8.39□□□□□ -1.07
HDAC1-204ENST00000471488 ACLYP53396 1101 aa8.39□□□□□ -1.07
HDAC1-204ENST00000471488 FAAP100Q0VG06 881 aa8.39□□□□□ -1.07
HDAC1-204ENST00000471488 PPIGQ13427 754 aaKnown RBP eCLIP8.39□□□□□ -1.079e-16■■■■■ 28.2
HDAC1-204ENST00000471488 ADGRE1Q14246 886 aa8.39□□□□□ -1.07
HDAC1-204ENST00000471488 AKNAD1Q5T1N1 836 aa8.39□□□□□ -1.07
HDAC1-204ENST00000471488 ZNF365Q70YC5 407 aa8.39□□□□□ -1.07
HDAC1-204ENST00000471488 TMEM199Q8N511 208 aa8.39□□□□□ -1.07
HDAC1-204ENST00000471488 HOXC10Q9NYD6 342 aa8.39□□□□□ -1.07
HDAC1-204ENST00000471488 CDK5RAP2Q96SN8 1893 aa8.38□□□□□ -1.07
HDAC1-204ENST00000471488 PLXNA1Q9UIW2 1896 aa8.38□□□□□ -1.07
HDAC1-204ENST00000471488 CYP2E1P05181 493 aaPredicted RBP8.38□□□□□ -1.07
HDAC1-204ENST00000471488 C6orf222P0C671 652 aaPredicted RBP8.38□□□□□ -1.07
HDAC1-204ENST00000471488 AKR1A1P14550 325 aa8.38□□□□□ -1.07
HDAC1-204ENST00000471488 HOXD11P31277 338 aaPredicted RBP8.38□□□□□ -1.07
HDAC1-204ENST00000471488 ZAP70P43403 619 aa8.38□□□□□ -1.07
HDAC1-204ENST00000471488 RABGGTBP53611 331 aa8.38□□□□□ -1.07
HDAC1-204ENST00000471488 KCTD2Q14681 263 aa8.38□□□□□ -1.07
HDAC1-204ENST00000471488 RAB30Q15771 203 aa8.38□□□□□ -1.07
HDAC1-204ENST00000471488 KCNA10Q16322 511 aa8.38□□□□□ -1.07
HDAC1-204ENST00000471488 TMEM240Q5SV17 173 aa8.38□□□□□ -1.07
HDAC1-204ENST00000471488 C1orf53Q5VUE5 145 aa8.38□□□□□ -1.07
HDAC1-204ENST00000471488 PPP2R2DQ66LE6 453 aa8.38□□□□□ -1.07
HDAC1-204ENST00000471488 MFSD5Q6N075 450 aa8.38□□□□□ -1.07
HDAC1-204ENST00000471488 LBX2Q6XYB7 198 aa8.38□□□□□ -1.07
HDAC1-204ENST00000471488 OTOP2Q7RTS6 562 aa8.38□□□□□ -1.07
HDAC1-204ENST00000471488 TTC6Q86TZ1 520 aa8.38□□□□□ -1.07
HDAC1-204ENST00000471488 ALYREFQ86V81 257 aaKnown RBP8.38□□□□□ -1.07
HDAC1-204ENST00000471488 MAGEB6Q8N7X4 407 aa8.38□□□□□ -1.07
HDAC1-204ENST00000471488 ATG4CQ96DT6 458 aa8.38□□□□□ -1.07
HDAC1-204ENST00000471488 GLT1D1Q96MS3 346 aa8.38□□□□□ -1.07
HDAC1-204ENST00000471488 UIMC1Q96RL1 719 aa8.38□□□□□ -1.07
HDAC1-204ENST00000471488 MTIF3Q9H2K0 278 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms