RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 GPR162Q16538 588 aa13.86□□□□□ -0.19
LINC00880-201ENST00000471357 KRT40Q6A162 431 aa13.86□□□□□ -0.19
LINC00880-201ENST00000471357 CLEC10AQ8IUN9 316 aa13.86□□□□□ -0.19
LINC00880-201ENST00000471357 CDAN1Q8IWY9 1227 aa13.86□□□□□ -0.19
LINC00880-201ENST00000471357 STAG2Q8N3U4 1231 aa13.86□□□□□ -0.19
LINC00880-201ENST00000471357 CABP5Q9NP86 173 aa13.86□□□□□ -0.19
LINC00880-201ENST00000471357 CNTNAP5Q8WYK1 1306 aa13.86□□□□□ -0.19
LINC00880-201ENST00000471357 PRPF40AO75400 957 aaKnown RBP13.86□□□□□ -0.19
LINC00880-201ENST00000471357 PARP1P09874 1014 aaKnown RBP13.86□□□□□ -0.19
LINC00880-201ENST00000471357 NCLP19338 710 aaKnown RBP13.86□□□□□ -0.19
LINC00880-201ENST00000471357 EPS15P42566 896 aa13.86□□□□□ -0.19
LINC00880-201ENST00000471357 ATP2B2Q01814 1243 aa13.86□□□□□ -0.19
LINC00880-201ENST00000471357 FAM173BQ6P4H8 233 aa13.86□□□□□ -0.19
LINC00880-201ENST00000471357 LRRC47Q8N1G4 583 aaKnown RBP13.86□□□□□ -0.19
LINC00880-201ENST00000471357 LZTS2Q9BRK4 669 aa13.86□□□□□ -0.19
LINC00880-201ENST00000471357 LMBRD1Q9NUN5 540 aa13.86□□□□□ -0.19
LINC00880-201ENST00000471357 NYAP2Q9P242 653 aa13.86□□□□□ -0.19
LINC00880-201ENST00000471357 SCAF8Q9UPN6 1271 aaKnown RBP13.86□□□□□ -0.19
LINC00880-201ENST00000471357 CNPY2Q9Y2B0 182 aa13.86□□□□□ -0.19
LINC00880-201ENST00000471357 GREB1LQ9C091 1923 aaPredicted RBP13.86□□□□□ -0.19
LINC00880-201ENST00000471357 ASTN2O75129 1339 aaPredicted RBP13.86□□□□□ -0.19
LINC00880-201ENST00000471357 UTRNP46939 3433 aa13.85□□□□□ -0.19
LINC00880-201ENST00000471357 MAP3K10Q02779 954 aa13.85□□□□□ -0.19
LINC00880-201ENST00000471357 RRP1BQ14684 758 aaKnown RBP13.85□□□□□ -0.19
LINC00880-201ENST00000471357 SEPT2Q15019 361 aa13.85□□□□□ -0.19
LINC00880-201ENST00000471357 PKN1Q16512 942 aa13.85□□□□□ -0.19
LINC00880-201ENST00000471357 SHROOM1Q2M3G4 852 aaPredicted RBP13.85□□□□□ -0.19
LINC00880-201ENST00000471357 MKL1Q969V6 931 aa13.85□□□□□ -0.19
LINC00880-201ENST00000471357 RBM27Q9P2N5 1060 aaKnown RBP13.85□□□□□ -0.19
LINC00880-201ENST00000471357 hCG_1642624A0A1W2PR95 340 aa13.85□□□□□ -0.19
LINC00880-201ENST00000471357 KLRF2D3W0D1 207 aa13.85□□□□□ -0.19
LINC00880-201ENST00000471357 TRAK2O60296 914 aa13.85□□□□□ -0.19
LINC00880-201ENST00000471357 GH2P01242 217 aa13.85□□□□□ -0.19
LINC00880-201ENST00000471357 GOLGA8HP0CJ92 632 aa13.85□□□□□ -0.19
LINC00880-201ENST00000471357 PDHBP11177 359 aa13.85□□□□□ -0.19
LINC00880-201ENST00000471357 EEF2P13639 858 aaKnown RBP13.85□□□□□ -0.19
LINC00880-201ENST00000471357 XBP1P17861 261 aa13.85□□□□□ -0.19
LINC00880-201ENST00000471357 KRT85P78386 507 aa13.85□□□□□ -0.19
LINC00880-201ENST00000471357 USP17L2Q6R6M4 530 aa13.85□□□□□ -0.19
LINC00880-201ENST00000471357 MIGA2Q7L4E1 593 aa13.85□□□□□ -0.19
LINC00880-201ENST00000471357 TRPM4Q8TD43 1214 aa13.85□□□□□ -0.19
LINC00880-201ENST00000471357 TEPSINQ96N21 525 aa13.85□□□□□ -0.19
LINC00880-201ENST00000471357 USP17L5A8MUK1 530 aa13.84□□□□□ -0.19
LINC00880-201ENST00000471357 GRIN3BO60391 1043 aa13.84□□□□□ -0.19
LINC00880-201ENST00000471357 SNHG28P0DPA3 235 aa13.84□□□□□ -0.19
LINC00880-201ENST00000471357 LMOD1P29536 600 aaPredicted RBP13.84□□□□□ -0.19
LINC00880-201ENST00000471357 JAG1P78504 1218 aa13.84□□□□□ -0.19
LINC00880-201ENST00000471357 KIF23Q02241 960 aaPredicted RBP13.84□□□□□ -0.19
LINC00880-201ENST00000471357 ICA1Q05084 483 aa13.84□□□□□ -0.19
LINC00880-201ENST00000471357 SKOR2Q2VWA4 1001 aaPredicted RBP13.84□□□□□ -0.19
LINC00880-201ENST00000471357 ANGEL2Q5VTE6 544 aaKnown RBP13.84□□□□□ -0.19
LINC00880-201ENST00000471357 RASGRP2Q7LDG7 609 aa13.84□□□□□ -0.19
LINC00880-201ENST00000471357 DEFB129Q9H1M3 183 aa13.84□□□□□ -0.19
LINC00880-201ENST00000471357 GDPD2Q9HCC8 539 aa13.84□□□□□ -0.19
LINC00880-201ENST00000471357 SMARCA1P28370 1054 aa13.83□□□□□ -0.2
LINC00880-201ENST00000471357 CSPP1Q1MSJ5 1256 aa13.83□□□□□ -0.2
LINC00880-201ENST00000471357 ASPRV1Q53RT3 343 aa13.83□□□□□ -0.2
LINC00880-201ENST00000471357 BRAPQ7Z569 592 aa13.83□□□□□ -0.2
LINC00880-201ENST00000471357 USP48Q86UV5 1035 aa13.83□□□□□ -0.2
LINC00880-201ENST00000471357 SIAH1Q8IUQ4 282 aa13.83□□□□□ -0.2
LINC00880-201ENST00000471357 APOBEC3FQ8IUX4 373 aaKnown RBP13.83□□□□□ -0.2
LINC00880-201ENST00000471357 TMEM87AQ8NBN3 555 aa13.83□□□□□ -0.2
LINC00880-201ENST00000471357 TCHHQ07283 1943 aa13.83□□□□□ -0.2
LINC00880-201ENST00000471357 FIBPO43427 364 aa13.83□□□□□ -0.2
LINC00880-201ENST00000471357 HIRAP54198 1017 aaPredicted RBP13.83□□□□□ -0.2
LINC00880-201ENST00000471357 SAFBQ15424 915 aaKnown RBP eCLIP13.83□□□□□ -0.2
LINC00880-201ENST00000471357 PFKFB3Q16875 520 aaPredicted RBP13.83□□□□□ -0.2
LINC00880-201ENST00000471357 DPY19L2Q6NUT2 758 aa13.83□□□□□ -0.2
LINC00880-201ENST00000471357 SPZ1Q9BXG8 430 aa13.83□□□□□ -0.2
LINC00880-201ENST00000471357 CYTH3O43739 400 aa13.82□□□□□ -0.2
LINC00880-201ENST00000471357 MMP1P03956 469 aa13.82□□□□□ -0.2
LINC00880-201ENST00000471357 SCG2P13521 617 aa13.82□□□□□ -0.2
LINC00880-201ENST00000471357 CAP2P40123 477 aa13.82□□□□□ -0.2
LINC00880-201ENST00000471357 GNL2Q13823 731 aaKnown RBP13.82□□□□□ -0.2
LINC00880-201ENST00000471357 ATL3Q6DD88 541 aa13.82□□□□□ -0.2
LINC00880-201ENST00000471357 PIBF1Q8WXW3 757 aa13.82□□□□□ -0.2
LINC00880-201ENST00000471357 ZNF396Q96N95 335 aaPredicted RBP13.82□□□□□ -0.2
LINC00880-201ENST00000471357 SCAND2PQ9GZW5 306 aaPredicted RBP13.82□□□□□ -0.2
LINC00880-201ENST00000471357 ADARB2Q9NS39 739 aaKnown RBP13.82□□□□□ -0.2
LINC00880-201ENST00000471357 TFIP11Q9UBB9 837 aaKnown RBP13.82□□□□□ -0.2
LINC00880-201ENST00000471357 CFAP45Q9UL16 551 aa13.82□□□□□ -0.2
LINC00880-201ENST00000471357 KCNJ14Q9UNX9 436 aa13.82□□□□□ -0.2
LINC00880-201ENST00000471357 MYH6P13533 1939 aa13.82□□□□□ -0.2
LINC00880-201ENST00000471357 KIF28PB7ZC32 967 aa13.81□□□□□ -0.2
LINC00880-201ENST00000471357 ZNF543Q08ER8 600 aa13.81□□□□□ -0.2
LINC00880-201ENST00000471357 SLC35G1Q2M3R5 365 aa13.81□□□□□ -0.2
LINC00880-201ENST00000471357 GGA3Q9NZ52 723 aa13.81□□□□□ -0.2
LINC00880-201ENST00000471357 VPS54Q9P1Q0 977 aa13.81□□□□□ -0.2
LINC00880-201ENST00000471357 ZBTB21Q9ULJ3 1066 aa13.81□□□□□ -0.2
LINC00880-201ENST00000471357 DDX49Q9Y6V7 483 aaKnown RBP13.81□□□□□ -0.2
LINC00880-201ENST00000471357 FRMPD2Q68DX3 1309 aaPredicted RBP13.81□□□□□ -0.2
LINC00880-201ENST00000471357 BAZ2BQ9UIF8 2168 aaKnown RBP13.81□□□□□ -0.2
LINC00880-201ENST00000471357 U2AF2P26368 475 aaKnown RBP eCLIP13.81□□□□□ -0.2
LINC00880-201ENST00000471357 GPATCH4Q5T3I0 446 aaKnown RBP13.81□□□□□ -0.2
LINC00880-201ENST00000471357 DIS3L2Q8IYB7 885 aaKnown RBP13.81□□□□□ -0.2
LINC00880-201ENST00000471357 HOOK2Q96ED9 719 aa13.81□□□□□ -0.2
LINC00880-201ENST00000471357 SYNPO2Q9UMS6 1093 aa13.81□□□□□ -0.2
LINC00880-201ENST00000471357 MYH4Q9Y623 1939 aa13.81□□□□□ -0.2
LINC00880-201ENST00000471357 NBPF12Q5TAG4 269 aaPredicted RBP13.8□□□□□ -0.2
LINC00880-201ENST00000471357 MYSM1Q5VVJ2 828 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms