RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 GBP6Q6ZN66 633 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 CPLX4Q7Z7G2 160 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 MTUS1Q9ULD2 1270 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 RPAP1Q9BWH6 1393 aaPredicted RBP11.75□□□□□ -0.53
RRP1B-202ENST00000470886 FMN2Q9NZ56 1722 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 ATP5DP30049 168 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 ST5P78524 1137 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 PPARAQ07869 468 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 IFT81Q8WYA0 676 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 CTNNBL1Q8WYA6 563 aaPredicted RBP11.75□□□□□ -0.53
RRP1B-202ENST00000470886 SLF1Q9BQI6 1058 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 CUEDC2Q9H467 287 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 PCDHA5Q9Y5H7 936 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 NDUFB9Q9Y6M9 179 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 NUTM2BA6NNL0 878 aaPredicted RBP11.75□□□□□ -0.53
RRP1B-202ENST00000470886 NUTM2EB1AL46 878 aaPredicted RBP11.75□□□□□ -0.53
RRP1B-202ENST00000470886 KCNJ18B7U540 433 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 GOLGA8KD6RF30 607 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 TRAF5O00463 557 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 NDUFAB1O14561 156 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 MYL1P05976 194 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 KCNJ12Q14500 433 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 VSTM4Q8IW00 320 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 RNF26Q9BY78 433 aaPredicted RBP11.75□□□□□ -0.53
RRP1B-202ENST00000470886 OSBPL5Q9H0X9 879 aaPredicted RBP11.75□□□□□ -0.53
RRP1B-202ENST00000470886 ARPP21Q9UBL0 812 aaPredicted RBP11.75□□□□□ -0.53
RRP1B-202ENST00000470886 KCNJ14Q9UNX9 436 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 CACNA1FO60840 1977 aa11.75□□□□□ -0.53
RRP1B-202ENST00000470886 SASH1O94885 1247 aa11.74□□□□□ -0.53
RRP1B-202ENST00000470886 FMNL1O95466 1100 aaPredicted RBP11.74□□□□□ -0.53
RRP1B-202ENST00000470886 TCP1P17987 556 aaKnown RBP11.74□□□□□ -0.53
RRP1B-202ENST00000470886 LONP1P36776 959 aaKnown RBP11.74□□□□□ -0.53
RRP1B-202ENST00000470886 CTSWP56202 376 aa11.74□□□□□ -0.53
RRP1B-202ENST00000470886 MORC3Q14149 939 aa11.74□□□□□ -0.53
RRP1B-202ENST00000470886 RETREG2Q8NC44 543 aa11.74□□□□□ -0.53
RRP1B-202ENST00000470886 CCDC114Q96M63 670 aa11.74□□□□□ -0.53
RRP1B-202ENST00000470886 MAST3O60307 1309 aa11.74□□□□□ -0.53
RRP1B-202ENST00000470886 CETN3O15182 167 aa11.74□□□□□ -0.53
RRP1B-202ENST00000470886 INPP5BP32019 993 aa11.74□□□□□ -0.53
RRP1B-202ENST00000470886 ADD1P35611 737 aaKnown RBP11.74□□□□□ -0.53
RRP1B-202ENST00000470886 PPP2R5EQ16537 467 aa11.74□□□□□ -0.53
RRP1B-202ENST00000470886 DPCR1Q3MIW9 517 aa11.74□□□□□ -0.53
RRP1B-202ENST00000470886 HAUS3Q68CZ6 603 aa11.74□□□□□ -0.53
RRP1B-202ENST00000470886 KCNJ6P48051 423 aa11.74□□□□□ -0.53
RRP1B-202ENST00000470886 CTDSPL2Q05D32 466 aa11.74□□□□□ -0.53
RRP1B-202ENST00000470886 LETM2Q2VYF4 491 aa11.74□□□□□ -0.53
RRP1B-202ENST00000470886 TRMT44Q8IYL2 757 aaKnown RBP11.74□□□□□ -0.53
RRP1B-202ENST00000470886 PRM3Q9NNZ6 103 aa11.74□□□□□ -0.53
RRP1B-202ENST00000470886 SAMD15Q9P1V8 674 aa11.74□□□□□ -0.53
RRP1B-202ENST00000470886 FER1L4A9Z1Z3 1794 aa11.74□□□□□ -0.53
RRP1B-202ENST00000470886 ACTN4O43707 911 aaKnown RBP11.74□□□□□ -0.53
RRP1B-202ENST00000470886 ZEB2O60315 1214 aa11.74□□□□□ -0.53
RRP1B-202ENST00000470886 TNNI2P48788 182 aa11.74□□□□□ -0.53
RRP1B-202ENST00000470886 SYCE1Q8N0S2 351 aa11.74□□□□□ -0.53
RRP1B-202ENST00000470886 BANK1Q8NDB2 785 aa11.74□□□□□ -0.53
RRP1B-202ENST00000470886 WDR66Q8TBY9 1149 aa11.74□□□□□ -0.53
RRP1B-202ENST00000470886 PANX2Q96RD6 677 aa11.74□□□□□ -0.53
RRP1B-202ENST00000470886 TLR7Q9NYK1 1049 aaKnown RBP11.74□□□□□ -0.53
RRP1B-202ENST00000470886 DLG5Q8TDM6 1919 aa11.73□□□□□ -0.53
RRP1B-202ENST00000470886 SEMA3EO15041 775 aa11.73□□□□□ -0.53
RRP1B-202ENST00000470886 C6orf163Q5TEZ5 329 aa11.73□□□□□ -0.53
RRP1B-202ENST00000470886 APOA5Q6Q788 366 aa11.73□□□□□ -0.53
RRP1B-202ENST00000470886 SPDYE3A6NKU9 549 aa11.73□□□□□ -0.53
RRP1B-202ENST00000470886 LAD1O00515 517 aa11.73□□□□□ -0.53
RRP1B-202ENST00000470886 ATP2A1O14983 1001 aa11.73□□□□□ -0.53
RRP1B-202ENST00000470886 PPFIA4O75335 1185 aa11.73□□□□□ -0.53
RRP1B-202ENST00000470886 EPB41P11171 864 aaKnown RBP11.73□□□□□ -0.53
RRP1B-202ENST00000470886 HIBADHP31937 336 aaKnown RBP11.73□□□□□ -0.53
RRP1B-202ENST00000470886 PTPN12Q05209 780 aaKnown RBP11.73□□□□□ -0.53
RRP1B-202ENST00000470886 ASIC2Q16515 512 aa11.73□□□□□ -0.53
RRP1B-202ENST00000470886 TMED8Q6PL24 325 aaPredicted RBP11.73□□□□□ -0.53
RRP1B-202ENST00000470886 HYOU1Q9Y4L1 999 aa11.73□□□□□ -0.53
RRP1B-202ENST00000470886 PALLDQ8WX93 1383 aa11.73□□□□□ -0.53
RRP1B-202ENST00000470886 HEG1Q9ULI3 1381 aa11.73□□□□□ -0.53
RRP1B-202ENST00000470886 EEF1GP26641 437 aaKnown RBP11.73□□□□□ -0.53
RRP1B-202ENST00000470886 LIFRP42702 1097 aa11.73□□□□□ -0.53
RRP1B-202ENST00000470886 TOB2Q14106 344 aaPredicted RBP11.73□□□□□ -0.53
RRP1B-202ENST00000470886 DDB1Q16531 1140 aa11.73□□□□□ -0.53
RRP1B-202ENST00000470886 PROSER3Q2NL68 480 aa11.73□□□□□ -0.53
RRP1B-202ENST00000470886 MCTP2Q6DN12 878 aa11.73□□□□□ -0.53
RRP1B-202ENST00000470886 EXOC4Q96A65 974 aa11.73□□□□□ -0.53
RRP1B-202ENST00000470886 ZSCAN10Q96SZ4 725 aaPredicted RBP11.73□□□□□ -0.53
RRP1B-202ENST00000470886 MYL10Q9BUA6 226 aa11.73□□□□□ -0.53
RRP1B-202ENST00000470886 HDAC9Q9UKV0 1011 aa11.73□□□□□ -0.53
RRP1B-202ENST00000470886 CALUO43852 315 aaPredicted RBP11.72□□□□□ -0.53
RRP1B-202ENST00000470886 FAM13AO94988 1023 aa11.72□□□□□ -0.53
RRP1B-202ENST00000470886 IFNAR1P17181 557 aa11.72□□□□□ -0.53
RRP1B-202ENST00000470886 RFC4P35249 363 aa11.72□□□□□ -0.53
RRP1B-202ENST00000470886 CABP7Q86V35 215 aa11.72□□□□□ -0.53
RRP1B-202ENST00000470886 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.72□□□□□ -0.53
RRP1B-202ENST00000470886 DDX41Q9UJV9 622 aaKnown RBP11.72□□□□□ -0.53
RRP1B-202ENST00000470886 CNPY4Q8N129 248 aa11.72□□□□□ -0.53
RRP1B-202ENST00000470886 SMARCC2Q8TAQ2 1214 aa11.72□□□□□ -0.53
RRP1B-202ENST00000470886 MTA3Q9BTC8 594 aa11.72□□□□□ -0.53
RRP1B-202ENST00000470886 IFIH1Q9BYX4 1025 aaKnown RBP11.72□□□□□ -0.53
RRP1B-202ENST00000470886 LRWD1Q9UFC0 647 aa11.72□□□□□ -0.53
RRP1B-202ENST00000470886 EPN1Q9Y6I3 576 aaPredicted RBP11.72□□□□□ -0.53
RRP1B-202ENST00000470886 CTNNA2P26232 953 aa11.72□□□□□ -0.53
RRP1B-202ENST00000470886 ARID4AP29374 1257 aaPredicted RBP11.72□□□□□ -0.53
RRP1B-202ENST00000470886 RAPGEF1Q13905 1077 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms