RNA–Protein interactions for RNA: ENST00000470586.5

PRDM15-210, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 2,283 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-210ENST00000470586 TNFAIP1Q13829 316 aa16.68■□□□□ 0.26
PRDM15-210ENST00000470586 ZYXQ15942 572 aaKnown RBP16.68■□□□□ 0.26
PRDM15-210ENST00000470586 CTCFLQ8NI51 663 aaPredicted RBP16.68■□□□□ 0.26
PRDM15-210ENST00000470586 ACER1Q8TDN7 264 aa16.68■□□□□ 0.26
PRDM15-210ENST00000470586 ANKS1AQ92625 1134 aa16.68■□□□□ 0.26
PRDM15-210ENST00000470586 UBA5Q9GZZ9 404 aa16.68■□□□□ 0.26
PRDM15-210ENST00000470586 DDAH1O94760 285 aa16.67■□□□□ 0.26
PRDM15-210ENST00000470586 ZSCAN22P10073 491 aaPredicted RBP16.67■□□□□ 0.26
PRDM15-210ENST00000470586 TOP1P11387 765 aaKnown RBP16.67■□□□□ 0.26
PRDM15-210ENST00000470586 INPP5BP32019 993 aa16.67■□□□□ 0.26
PRDM15-210ENST00000470586 ICA1Q05084 483 aa16.67■□□□□ 0.26
PRDM15-210ENST00000470586 FUT2Q10981 343 aa16.67■□□□□ 0.26
PRDM15-210ENST00000470586 SPICE1Q8N0Z3 855 aa16.67■□□□□ 0.26
PRDM15-210ENST00000470586 NUP88Q99567 741 aaPredicted RBP16.67■□□□□ 0.26
PRDM15-210ENST00000470586 GDPD2Q9HCC8 539 aa16.67■□□□□ 0.26
PRDM15-210ENST00000470586 VAT1LQ9HCJ6 419 aa16.67■□□□□ 0.26
PRDM15-210ENST00000470586 HERC5Q9UII4 1024 aaKnown RBP16.67■□□□□ 0.26
PRDM15-210ENST00000470586 H3BQV1 296 aa16.67■□□□□ 0.26
PRDM15-210ENST00000470586 EPHX2P34913 555 aa16.67■□□□□ 0.26
PRDM15-210ENST00000470586 FMR1Q06787 632 aaKnown RBP eCLIP16.67■□□□□ 0.26
PRDM15-210ENST00000470586 IFFO2Q5TF58 517 aa16.67■□□□□ 0.26
PRDM15-210ENST00000470586 MCTP1Q6DN14 999 aa16.67■□□□□ 0.26
PRDM15-210ENST00000470586 KCTD1Q719H9 257 aa16.67■□□□□ 0.26
PRDM15-210ENST00000470586 ZKSCAN4Q969J2 545 aaPredicted RBP16.67■□□□□ 0.26
PRDM15-210ENST00000470586 SHISA4Q96DD7 197 aa16.67■□□□□ 0.26
PRDM15-210ENST00000470586 ALG1Q9BT22 464 aa16.67■□□□□ 0.26
PRDM15-210ENST00000470586 GPCPD1Q9NPB8 672 aa16.67■□□□□ 0.26
PRDM15-210ENST00000470586 PCNTO95613 3336 aa16.67■□□□□ 0.26
PRDM15-210ENST00000470586 PHF20L1A8MW92 1017 aa16.66■□□□□ 0.26
PRDM15-210ENST00000470586 SSRP1Q08945 709 aaKnown RBP16.66■□□□□ 0.26
PRDM15-210ENST00000470586 TTBK2Q6IQ55 1244 aa16.66■□□□□ 0.26
PRDM15-210ENST00000470586 TMTC3Q6ZXV5 915 aa16.66■□□□□ 0.26
PRDM15-210ENST00000470586 CCDC17Q96LX7 622 aa16.66■□□□□ 0.26
PRDM15-210ENST00000470586 CYTH3O43739 400 aa16.66■□□□□ 0.26
PRDM15-210ENST00000470586 PDHBP11177 359 aa16.66■□□□□ 0.26
PRDM15-210ENST00000470586 IFNAR1P17181 557 aa16.66■□□□□ 0.26
PRDM15-210ENST00000470586 SLC16A2P36021 539 aa16.66■□□□□ 0.26
PRDM15-210ENST00000470586 HMGN5P82970 282 aaKnown RBP16.66■□□□□ 0.26
PRDM15-210ENST00000470586 KIAA1755Q5JYT7 1200 aa16.66■□□□□ 0.26
PRDM15-210ENST00000470586 ZBTB21Q9ULJ3 1066 aa16.66■□□□□ 0.26
PRDM15-210ENST00000470586 KCNJ14Q9UNX9 436 aa16.66■□□□□ 0.26
PRDM15-210ENST00000470586 PLIN4Q96Q06 1357 aa16.66■□□□□ 0.26
PRDM15-210ENST00000470586 WDR33Q9C0J8 1336 aaKnown RBP16.65■□□□□ 0.26
PRDM15-210ENST00000470586 BAG4O95429 457 aaKnown RBP16.65■□□□□ 0.26
PRDM15-210ENST00000470586 FMNL1O95466 1100 aaPredicted RBP16.65■□□□□ 0.26
PRDM15-210ENST00000470586 F13A1P00488 732 aa16.65■□□□□ 0.26
PRDM15-210ENST00000470586 NOVP48745 357 aa16.65■□□□□ 0.26
PRDM15-210ENST00000470586 CPLX2Q6PUV4 134 aaKnown RBP16.65■□□□□ 0.26
PRDM15-210ENST00000470586 TMEM179Q6ZVK1 233 aa16.65■□□□□ 0.26
PRDM15-210ENST00000470586 CAP2P40123 477 aa16.65■□□□□ 0.26
PRDM15-210ENST00000470586 GRM4Q14833 912 aa16.65■□□□□ 0.26
PRDM15-210ENST00000470586 PKN1Q16512 942 aa16.65■□□□□ 0.26
PRDM15-210ENST00000470586 C8orf76Q96K31 380 aa16.65■□□□□ 0.26
PRDM15-210ENST00000470586 KANSL2Q9H9L4 492 aa16.65■□□□□ 0.26
PRDM15-210ENST00000470586 CABP5Q9NP86 173 aa16.65■□□□□ 0.26
PRDM15-210ENST00000470586 COL2A1P02458 1487 aaPredicted RBP16.64■□□□□ 0.25
PRDM15-210ENST00000470586 KLRF2D3W0D1 207 aa16.64■□□□□ 0.25
PRDM15-210ENST00000470586 HOMER1Q86YM7 354 aa16.64■□□□□ 0.25
PRDM15-210ENST00000470586 VPS54Q9P1Q0 977 aa16.64■□□□□ 0.25
PRDM15-210ENST00000470586 CNTNAP5Q8WYK1 1306 aa16.64■□□□□ 0.25
PRDM15-210ENST00000470586 CCDC196A0A1B0GTZ2 297 aa16.63■□□□□ 0.25
PRDM15-210ENST00000470586 ADAMTS3O15072 1205 aa16.63■□□□□ 0.25
PRDM15-210ENST00000470586 CDKL5O76039 1030 aa16.63■□□□□ 0.25
PRDM15-210ENST00000470586 CALM1P0DP23 149 aa16.63■□□□□ 0.25
PRDM15-210ENST00000470586 CALM2P0DP24 149 aa16.63■□□□□ 0.25
PRDM15-210ENST00000470586 CALM3P0DP25 149 aa16.63■□□□□ 0.25
PRDM15-210ENST00000470586 CCDC178Q5BJE1 867 aa16.63■□□□□ 0.25
PRDM15-210ENST00000470586 MOB2Q70IA6 237 aa16.63■□□□□ 0.25
PRDM15-210ENST00000470586 KRT26Q7Z3Y9 468 aa16.63■□□□□ 0.25
PRDM15-210ENST00000470586 USP48Q86UV5 1035 aa16.63■□□□□ 0.25
PRDM15-210ENST00000470586 APOBEC3FQ8IUX4 373 aaKnown RBP16.63■□□□□ 0.25
PRDM15-210ENST00000470586 GPKOWQ92917 476 aaPredicted RBP eCLIP16.63■□□□□ 0.25
PRDM15-210ENST00000470586 DCPSQ96C86 337 aaKnown RBP16.63■□□□□ 0.25
PRDM15-210ENST00000470586 L3MBTL3Q96JM7 780 aaPredicted RBP16.63■□□□□ 0.25
PRDM15-210ENST00000470586 TAF1DQ9H5J8 278 aaPredicted RBP16.63■□□□□ 0.25
PRDM15-210ENST00000470586 NID2Q14112 1375 aa16.63■□□□□ 0.25
PRDM15-210ENST00000470586 PALM3A6NDB9 673 aaPredicted RBP16.63■□□□□ 0.25
PRDM15-210ENST00000470586 KIF28PB7ZC32 967 aa16.63■□□□□ 0.25
PRDM15-210ENST00000470586 TBC1D12O60347 775 aa16.63■□□□□ 0.25
PRDM15-210ENST00000470586 PARP1P09874 1014 aaKnown RBP16.63■□□□□ 0.25
PRDM15-210ENST00000470586 SNAP25P60880 206 aa16.63■□□□□ 0.25
PRDM15-210ENST00000470586 DNM1Q05193 864 aaKnown RBP16.63■□□□□ 0.25
PRDM15-210ENST00000470586 CCDC96Q2M329 555 aa16.63■□□□□ 0.25
PRDM15-210ENST00000470586 SAMD1Q6SPF0 538 aaPredicted RBP16.63■□□□□ 0.25
PRDM15-210ENST00000470586 FTOQ9C0B1 505 aaKnown RBP eCLIP16.63■□□□□ 0.25
PRDM15-210ENST00000470586 PDCP20941 246 aa16.62■□□□□ 0.25
PRDM15-210ENST00000470586 TRIM22Q8IYM9 498 aa16.62■□□□□ 0.25
PRDM15-210ENST00000470586 WRNIP1Q96S55 665 aa16.62■□□□□ 0.25
PRDM15-210ENST00000470586 RRAGCQ9HB90 399 aa16.62■□□□□ 0.25
PRDM15-210ENST00000470586 RBM28Q9NW13 759 aaKnown RBP16.62■□□□□ 0.25
PRDM15-210ENST00000470586 SSC5DA1L4H1 1573 aa16.62■□□□□ 0.25
PRDM15-210ENST00000470586 F5H6K3 240 aa16.62■□□□□ 0.25
PRDM15-210ENST00000470586 NCLP19338 710 aaKnown RBP16.62■□□□□ 0.25
PRDM15-210ENST00000470586 MAP3K10Q02779 954 aa16.62■□□□□ 0.25
PRDM15-210ENST00000470586 CEBPZQ03701 1054 aaKnown RBP16.62■□□□□ 0.25
PRDM15-210ENST00000470586 KLRC3Q07444 240 aa16.62■□□□□ 0.25
PRDM15-210ENST00000470586 KRT40Q6A162 431 aa16.62■□□□□ 0.25
PRDM15-210ENST00000470586 SULF1Q8IWU6 871 aa16.62■□□□□ 0.25
PRDM15-210ENST00000470586 TFIP11Q9UBB9 837 aaKnown RBP16.62■□□□□ 0.25
PRDM15-210ENST00000470586 CLEC11AQ9Y240 323 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms