RNA–Protein interactions for RNA: ENST00000470238.1

SCYL3-205, Transcript of SCY1 like pseudokinase 3, humanhuman

TSL 5

Gene SCYL3, Length 1,538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL3-205ENST00000470238 COL4A5P29400 1685 aa17.06■□□□□ 0.32
SCYL3-205ENST00000470238 IGKV6D-41A0A0C4DH26 115 aa17.06■□□□□ 0.32
SCYL3-205ENST00000470238 hCG_1642624A0A1W2PR95 340 aa17.06■□□□□ 0.32
SCYL3-205ENST00000470238 COL2A1P02458 1487 aaPredicted RBP17.06■□□□□ 0.32
SCYL3-205ENST00000470238 PARP1P09874 1014 aaKnown RBP17.06■□□□□ 0.32
SCYL3-205ENST00000470238 AKR1B1P15121 316 aa17.06■□□□□ 0.32
SCYL3-205ENST00000470238 BRCA1P38398 1863 aaKnown RBP17.06■□□□□ 0.32
SCYL3-205ENST00000470238 RILPL1Q5EBL4 403 aa17.06■□□□□ 0.32
SCYL3-205ENST00000470238 ZSCAN29Q8IWY8 852 aaPredicted RBP17.06■□□□□ 0.32
SCYL3-205ENST00000470238 STAG2Q8N3U4 1231 aa17.06■□□□□ 0.32
SCYL3-205ENST00000470238 TRIM34Q9BYJ4 488 aa17.06■□□□□ 0.32
SCYL3-205ENST00000470238 TDRD3Q9H7E2 651 aaKnown RBP17.06■□□□□ 0.32
SCYL3-205ENST00000470238 TMOD2Q9NZR1 351 aa17.06■□□□□ 0.32
SCYL3-205ENST00000470238 PCDHA7Q9UN72 937 aa17.06■□□□□ 0.32
SCYL3-205ENST00000470238 ATRNL1Q5VV63 1379 aa17.05■□□□□ 0.32
SCYL3-205ENST00000470238 NR1I2O75469 434 aa17.05■□□□□ 0.32
SCYL3-205ENST00000470238 MAP3K11Q16584 847 aa17.05■□□□□ 0.32
SCYL3-205ENST00000470238 AGBL3Q8NEM8 1001 aa17.05■□□□□ 0.32
SCYL3-205ENST00000470238 MRPS27Q92552 414 aaKnown RBP17.05■□□□□ 0.32
SCYL3-205ENST00000470238 PRMT6Q96LA8 375 aaPredicted RBP17.05■□□□□ 0.32
SCYL3-205ENST00000470238 TNMDQ9H2S6 317 aa17.05■□□□□ 0.32
SCYL3-205ENST00000470238 CLSTN2Q9H4D0 955 aa17.05■□□□□ 0.32
SCYL3-205ENST00000470238 SH3GLB2Q9NR46 395 aa17.05■□□□□ 0.32
SCYL3-205ENST00000470238 SPDYE2BA6NHP3 402 aa17.04■□□□□ 0.32
SCYL3-205ENST00000470238 PPP6R2O75170 966 aa17.04■□□□□ 0.32
SCYL3-205ENST00000470238 TTLL1O95922 423 aa17.04■□□□□ 0.32
SCYL3-205ENST00000470238 SPDYE6P0CI01 402 aa17.04■□□□□ 0.32
SCYL3-205ENST00000470238 DLGAP5Q15398 846 aa17.04■□□□□ 0.32
SCYL3-205ENST00000470238 FOXP4Q8IVH2 680 aaPredicted RBP17.04■□□□□ 0.32
SCYL3-205ENST00000470238 FSIP1Q8NA03 581 aa17.04■□□□□ 0.32
SCYL3-205ENST00000470238 JDP2Q8WYK2 163 aa17.04■□□□□ 0.32
SCYL3-205ENST00000470238 SGIP1Q9BQI5 828 aa17.04■□□□□ 0.32
SCYL3-205ENST00000470238 SPZ1Q9BXG8 430 aa17.04■□□□□ 0.32
SCYL3-205ENST00000470238 RBSNQ9H1K0 784 aa17.04■□□□□ 0.32
SCYL3-205ENST00000470238 MTMR7Q9Y216 660 aa17.04■□□□□ 0.32
SCYL3-205ENST00000470238 FER1L6Q2WGJ9 1857 aa17.03■□□□□ 0.32
SCYL3-205ENST00000470238 DDTLA6NHG4 134 aaPredicted RBP17.03■□□□□ 0.32
SCYL3-205ENST00000470238 KLRF2D3W0D1 207 aa17.03■□□□□ 0.32
SCYL3-205ENST00000470238 MPHOSPH10O00566 681 aaKnown RBP17.03■□□□□ 0.32
SCYL3-205ENST00000470238 CALML3P27482 149 aa17.03■□□□□ 0.32
SCYL3-205ENST00000470238 SMARCA1P28370 1054 aa17.03■□□□□ 0.32
SCYL3-205ENST00000470238 FAM160A1Q05DH4 1040 aa17.03■□□□□ 0.32
SCYL3-205ENST00000470238 NR5A1Q13285 461 aa17.03■□□□□ 0.32
SCYL3-205ENST00000470238 FAM177A1Q8N128 213 aaPredicted RBP17.03■□□□□ 0.32
SCYL3-205ENST00000470238 OXER1Q8TDS5 423 aa17.03■□□□□ 0.32
SCYL3-205ENST00000470238 UPF1Q92900 1129 aaKnown RBP eCLIP17.03■□□□□ 0.32
SCYL3-205ENST00000470238 SHISA4Q96DD7 197 aa17.03■□□□□ 0.32
SCYL3-205ENST00000470238 KINO60870 393 aaKnown RBP17.02■□□□□ 0.32
SCYL3-205ENST00000470238 NLRP5P59047 1200 aa17.02■□□□□ 0.32
SCYL3-205ENST00000470238 PTPAQ15257 358 aa17.02■□□□□ 0.32
SCYL3-205ENST00000470238 SH3BP5LQ7L8J4 393 aa17.02■□□□□ 0.32
SCYL3-205ENST00000470238 ANP32BQ92688 251 aaKnown RBP17.02■□□□□ 0.32
SCYL3-205ENST00000470238 GOLPH3LQ9H4A5 285 aa17.02■□□□□ 0.32
SCYL3-205ENST00000470238 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.02■□□□□ 0.32
SCYL3-205ENST00000470238 CEP131Q9UPN4 1083 aa17.02■□□□□ 0.32
SCYL3-205ENST00000470238 SIPA1L1O43166 1804 aa17.02■□□□□ 0.32
SCYL3-205ENST00000470238 GREB1LQ9C091 1923 aaPredicted RBP17.02■□□□□ 0.31
SCYL3-205ENST00000470238 CTAGE5O15320 804 aa17.01■□□□□ 0.31
SCYL3-205ENST00000470238 CXCL9Q07325 125 aa17.01■□□□□ 0.31
SCYL3-205ENST00000470238 CAMK4Q16566 473 aa17.01■□□□□ 0.31
SCYL3-205ENST00000470238 CERKLQ49MI3 558 aaPredicted RBP17.01■□□□□ 0.31
SCYL3-205ENST00000470238 ASPRV1Q53RT3 343 aa17.01■□□□□ 0.31
SCYL3-205ENST00000470238 METTL16Q86W50 562 aaKnown RBP17.01■□□□□ 0.31
SCYL3-205ENST00000470238 MTMR14Q8NCE2 650 aa17.01■□□□□ 0.31
SCYL3-205ENST00000470238 PIBF1Q8WXW3 757 aa17.01■□□□□ 0.31
SCYL3-205ENST00000470238 PANK2Q9BZ23 570 aa17.01■□□□□ 0.31
SCYL3-205ENST00000470238 DNAJC18Q9H819 358 aa17.01■□□□□ 0.31
SCYL3-205ENST00000470238 CABP5Q9NP86 173 aa17.01■□□□□ 0.31
SCYL3-205ENST00000470238 CLIP2Q9UDT6 1046 aa17.01■□□□□ 0.31
SCYL3-205ENST00000470238 NOL7Q9UMY1 257 aaKnown RBP17.01■□□□□ 0.31
SCYL3-205ENST00000470238 CYTH3O43739 400 aa17.01■□□□□ 0.31
SCYL3-205ENST00000470238 GOLGA8HP0CJ92 632 aa17.01■□□□□ 0.31
SCYL3-205ENST00000470238 CCDC192P0DO97 292 aa17.01■□□□□ 0.31
SCYL3-205ENST00000470238 PDHBP11177 359 aa17.01■□□□□ 0.31
SCYL3-205ENST00000470238 CMA1P23946 247 aa17.01■□□□□ 0.31
SCYL3-205ENST00000470238 MMP14P50281 582 aa17.01■□□□□ 0.31
SCYL3-205ENST00000470238 TOB1P50616 345 aaPredicted RBP17.01■□□□□ 0.31
SCYL3-205ENST00000470238 SNW1Q13573 536 aaKnown RBP17.01■□□□□ 0.31
SCYL3-205ENST00000470238 AXDND1Q5T1B0 1012 aaPredicted RBP17.01■□□□□ 0.31
SCYL3-205ENST00000470238 CIAPIN1Q6FI81 312 aa17.01■□□□□ 0.31
SCYL3-205ENST00000470238 TATDN1Q6P1N9 297 aa17.01■□□□□ 0.31
SCYL3-205ENST00000470238 USP17L2Q6R6M4 530 aa17.01■□□□□ 0.31
SCYL3-205ENST00000470238 RBM43Q6ZSC3 357 aaKnown RBP17.01■□□□□ 0.31
SCYL3-205ENST00000470238 LRRC47Q8N1G4 583 aaKnown RBP17.01■□□□□ 0.31
SCYL3-205ENST00000470238 ENGASEQ8NFI3 743 aa17.01■□□□□ 0.31
SCYL3-205ENST00000470238 CCDC148Q8NFR7 591 aa17.01■□□□□ 0.31
SCYL3-205ENST00000470238 BCS1LQ9Y276 419 aa17.01■□□□□ 0.31
SCYL3-205ENST00000470238 ZBTB12Q9Y330 459 aaPredicted RBP17.01■□□□□ 0.31
SCYL3-205ENST00000470238 LTBP3Q9NS15 1303 aa17■□□□□ 0.31
SCYL3-205ENST00000470238 USP17L5A8MUK1 530 aa17■□□□□ 0.31
SCYL3-205ENST00000470238 NFKBIEO00221 500 aa17■□□□□ 0.31
SCYL3-205ENST00000470238 SNHG28P0DPA3 235 aa17■□□□□ 0.31
SCYL3-205ENST00000470238 MARCKSP29966 332 aaPredicted RBP17■□□□□ 0.31
SCYL3-205ENST00000470238 PTGER2P43116 358 aa17■□□□□ 0.31
SCYL3-205ENST00000470238 TNIP1Q15025 636 aa17■□□□□ 0.31
SCYL3-205ENST00000470238 NPY5RQ15761 445 aa17■□□□□ 0.31
SCYL3-205ENST00000470238 FKBP1CQ5VVH2 108 aa17■□□□□ 0.31
SCYL3-205ENST00000470238 GALNT17Q6IS24 598 aa17■□□□□ 0.31
SCYL3-205ENST00000470238 RRP36Q96EU6 259 aaKnown RBP17■□□□□ 0.31
SCYL3-205ENST00000470238 FUCA2Q9BTY2 467 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms