RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 USP17L20D6RJB6 530 aa20.91■□□□□ 0.94
MRPL28-208ENST00000469744 USP17L24Q0WX57 530 aa20.91■□□□□ 0.94
MRPL28-208ENST00000469744 SLAIN1Q8ND83 568 aa20.91■□□□□ 0.94
MRPL28-208ENST00000469744 RPAP3Q9H6T3 665 aaPredicted RBP20.91■□□□□ 0.94
MRPL28-208ENST00000469744 ARPP21Q9UBL0 812 aaPredicted RBP20.91■□□□□ 0.94
MRPL28-208ENST00000469744 MINDY4BA8MYZ0 360 aa20.9■□□□□ 0.94
MRPL28-208ENST00000469744 REC8O95072 547 aa20.9■□□□□ 0.94
MRPL28-208ENST00000469744 ICA1Q05084 483 aa20.9■□□□□ 0.94
MRPL28-208ENST00000469744 Q3C1V9 767 aa20.9■□□□□ 0.94
MRPL28-208ENST00000469744 KIAA1755Q5JYT7 1200 aa20.9■□□□□ 0.94
MRPL28-208ENST00000469744 CATSPERGQ6ZRH7 1159 aa20.9■□□□□ 0.94
MRPL28-208ENST00000469744 GPRC5AQ8NFJ5 357 aa20.9■□□□□ 0.94
MRPL28-208ENST00000469744 KIF2CQ99661 725 aa20.9■□□□□ 0.94
MRPL28-208ENST00000469744 APPP05067 770 aa20.89■□□□□ 0.94
MRPL28-208ENST00000469744 CCL5P13501 91 aa20.89■□□□□ 0.94
MRPL28-208ENST00000469744 ERVK-9P63128 1117 aa20.89■□□□□ 0.94
MRPL28-208ENST00000469744 ERVK-24P63145 666 aa20.89■□□□□ 0.94
MRPL28-208ENST00000469744 LRRFIP1Q32MZ4 808 aaKnown RBP20.89■□□□□ 0.94
MRPL28-208ENST00000469744 SIAH1Q8IUQ4 282 aa20.89■□□□□ 0.94
MRPL28-208ENST00000469744 USP26Q9BXU7 913 aa20.89■□□□□ 0.94
MRPL28-208ENST00000469744 INHAP05111 366 aa20.88■□□□□ 0.93
MRPL28-208ENST00000469744 TDO2P48775 406 aa20.88■□□□□ 0.93
MRPL28-208ENST00000469744 IRF5Q13568 498 aa20.88■□□□□ 0.93
MRPL28-208ENST00000469744 CCDC17Q96LX7 622 aa20.88■□□□□ 0.93
MRPL28-208ENST00000469744 PORCNQ9H237 461 aa20.88■□□□□ 0.93
MRPL28-208ENST00000469744 EPB41L2O43491 1005 aaKnown RBP20.88■□□□□ 0.93
MRPL28-208ENST00000469744 CNMDO75829 334 aa20.88■□□□□ 0.93
MRPL28-208ENST00000469744 UBXN2AP68543 259 aa20.88■□□□□ 0.93
MRPL28-208ENST00000469744 ATP2B2Q01814 1243 aa20.88■□□□□ 0.93
MRPL28-208ENST00000469744 SBK1Q52WX2 424 aa20.88■□□□□ 0.93
MRPL28-208ENST00000469744 ZMYM1Q5SVZ6 1142 aa20.88■□□□□ 0.93
MRPL28-208ENST00000469744 GIMAP6Q6P9H5 292 aa20.88■□□□□ 0.93
MRPL28-208ENST00000469744 CCDC129Q6ZRS4 1044 aa20.88■□□□□ 0.93
MRPL28-208ENST00000469744 SPICE1Q8N0Z3 855 aa20.88■□□□□ 0.93
MRPL28-208ENST00000469744 TANGO6Q9C0B7 1094 aa20.88■□□□□ 0.93
MRPL28-208ENST00000469744 RNF208Q9H0X6 261 aa20.88■□□□□ 0.93
MRPL28-208ENST00000469744 UNC93B1Q9H1C4 597 aa20.88■□□□□ 0.93
MRPL28-208ENST00000469744 GJD2Q9UKL4 321 aa20.88■□□□□ 0.93
MRPL28-208ENST00000469744 GREB1LQ9C091 1923 aaPredicted RBP20.87■□□□□ 0.93
MRPL28-208ENST00000469744 GNAT2P19087 354 aa20.87■□□□□ 0.93
MRPL28-208ENST00000469744 NFKBIBQ15653 356 aa20.87■□□□□ 0.93
MRPL28-208ENST00000469744 PXYLP1Q8TE99 480 aa20.87■□□□□ 0.93
MRPL28-208ENST00000469744 SHISA4Q96DD7 197 aa20.87■□□□□ 0.93
MRPL28-208ENST00000469744 ARHGEF10LQ9HCE6 1279 aa20.87■□□□□ 0.93
MRPL28-208ENST00000469744 RLFQ13129 1914 aa20.86■□□□□ 0.93
MRPL28-208ENST00000469744 SPDYE16A6NNV3 312 aaPredicted RBP20.86■□□□□ 0.93
MRPL28-208ENST00000469744 EEF2P13639 858 aaKnown RBP20.86■□□□□ 0.93
MRPL28-208ENST00000469744 RASA1P20936 1047 aa20.86■□□□□ 0.93
MRPL28-208ENST00000469744 RABEP1Q15276 862 aa20.86■□□□□ 0.93
MRPL28-208ENST00000469744 CCAR1Q8IX12 1150 aaKnown RBP20.86■□□□□ 0.93
MRPL28-208ENST00000469744 GTF3C2Q8WUA4 911 aaPredicted RBP20.86■□□□□ 0.93
MRPL28-208ENST00000469744 ROBO3Q96MS0 1386 aa20.86■□□□□ 0.93
MRPL28-208ENST00000469744 PATL2C9JE40 543 aaKnown RBP20.85■□□□□ 0.93
MRPL28-208ENST00000469744 CYP2B6P20813 491 aa20.85■□□□□ 0.93
MRPL28-208ENST00000469744 IFNL3Q8IZI9 196 aa20.85■□□□□ 0.93
MRPL28-208ENST00000469744 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.85■□□□□ 0.93
MRPL28-208ENST00000469744 MKNK2Q9HBH9 465 aa20.85■□□□□ 0.93
MRPL28-208ENST00000469744 BTBD7Q9P203 1132 aa20.85■□□□□ 0.93
MRPL28-208ENST00000469744 TMX2Q9Y320 296 aa20.85■□□□□ 0.93
MRPL28-208ENST00000469744 RABGAP1Q9Y3P9 1069 aa20.85■□□□□ 0.93
MRPL28-208ENST00000469744 PRDM1O75626 825 aa20.84■□□□□ 0.93
MRPL28-208ENST00000469744 MAPK4P31152 587 aa20.84■□□□□ 0.93
MRPL28-208ENST00000469744 SAMD1Q6SPF0 538 aaPredicted RBP20.84■□□□□ 0.93
MRPL28-208ENST00000469744 IL27Q8NEV9 243 aa20.84■□□□□ 0.93
MRPL28-208ENST00000469744 EVI5LQ96CN4 794 aa20.84■□□□□ 0.93
MRPL28-208ENST00000469744 VCPKMTQ9H867 229 aa20.84■□□□□ 0.93
MRPL28-208ENST00000469744 PARP14Q460N5 1801 aa20.84■□□□□ 0.93
MRPL28-208ENST00000469744 RAD21O60216 631 aa20.83■□□□□ 0.93
MRPL28-208ENST00000469744 TRIM32Q13049 653 aa20.83■□□□□ 0.93
MRPL28-208ENST00000469744 WDR78Q5VTH9 848 aa20.83■□□□□ 0.93
MRPL28-208ENST00000469744 GPR142Q7Z601 462 aa20.83■□□□□ 0.93
MRPL28-208ENST00000469744 SH2D4AQ9H788 454 aa20.83■□□□□ 0.93
MRPL28-208ENST00000469744 KANSL2Q9H9L4 492 aa20.83■□□□□ 0.93
MRPL28-208ENST00000469744 A0A0G2JMZ2 1700 aa20.83■□□□□ 0.92
MRPL28-208ENST00000469744 FOXP2O15409 715 aa20.82■□□□□ 0.92
MRPL28-208ENST00000469744 GJB1P08034 283 aa20.82■□□□□ 0.92
MRPL28-208ENST00000469744 LBX2Q6XYB7 198 aa20.82■□□□□ 0.92
MRPL28-208ENST00000469744 TRIB2Q92519 343 aa20.82■□□□□ 0.92
MRPL28-208ENST00000469744 LPAR1Q92633 364 aa20.82■□□□□ 0.92
MRPL28-208ENST00000469744 NUDT12Q9BQG2 462 aa20.82■□□□□ 0.92
MRPL28-208ENST00000469744 NACAP1Q9BZK3 213 aa20.82■□□□□ 0.92
MRPL28-208ENST00000469744 NAPBQ9H115 298 aa20.82■□□□□ 0.92
MRPL28-208ENST00000469744 CWC22Q9HCG8 908 aaKnown RBP20.82■□□□□ 0.92
MRPL28-208ENST00000469744 MYH4Q9Y623 1939 aa20.82■□□□□ 0.92
MRPL28-208ENST00000469744 HMGCRP04035 888 aa20.81■□□□□ 0.92
MRPL28-208ENST00000469744 GJA8P48165 433 aa20.81■□□□□ 0.92
MRPL28-208ENST00000469744 COG2Q14746 738 aa20.81■□□□□ 0.92
MRPL28-208ENST00000469744 PLEKHH3Q7Z736 793 aa20.81■□□□□ 0.92
MRPL28-208ENST00000469744 SOCS4Q8WXH5 440 aa20.81■□□□□ 0.92
MRPL28-208ENST00000469744 FAM227BQ96M60 508 aa20.81■□□□□ 0.92
MRPL28-208ENST00000469744 ESYT1Q9BSJ8 1104 aa20.81■□□□□ 0.92
MRPL28-208ENST00000469744 CHMP5Q9NZZ3 219 aa20.81■□□□□ 0.92
MRPL28-208ENST00000469744 TRIM6-TRIM34B2RNG4 842 aa20.81■□□□□ 0.92
MRPL28-208ENST00000469744 FLOT1O75955 427 aa20.81■□□□□ 0.92
MRPL28-208ENST00000469744 CHMLP26374 656 aa20.81■□□□□ 0.92
MRPL28-208ENST00000469744 CCNA1P78396 465 aa20.81■□□□□ 0.92
MRPL28-208ENST00000469744 VPS53Q5VIR6 699 aa20.81■□□□□ 0.92
MRPL28-208ENST00000469744 U2AF1L4Q8WU68 220 aaKnown RBP20.81■□□□□ 0.92
MRPL28-208ENST00000469744 DEFB118Q96PH6 123 aa20.81■□□□□ 0.92
MRPL28-208ENST00000469744 COL11A1P12107 1806 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms