RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 FNBP4Q8N3X1 1017 aaPredicted RBP16.75■□□□□ 0.27
CBWD3-205ENST00000469687 SLC44A5Q8NCS7 719 aa16.75■□□□□ 0.27
CBWD3-205ENST00000469687 GPKOWQ92917 476 aaPredicted RBP eCLIP16.75■□□□□ 0.27
CBWD3-205ENST00000469687 PAGE5Q96GU1 130 aa16.75■□□□□ 0.27
CBWD3-205ENST00000469687 USP21Q9UK80 565 aa16.75■□□□□ 0.27
CBWD3-205ENST00000469687 THSD7AQ9UPZ6 1657 aa16.75■□□□□ 0.27
CBWD3-205ENST00000469687 USP17L3A6NCW0 530 aa16.74■□□□□ 0.27
CBWD3-205ENST00000469687 USP17L4A6NCW7 530 aa16.74■□□□□ 0.27
CBWD3-205ENST00000469687 LDHBP07195 334 aaKnown RBP16.74■□□□□ 0.27
CBWD3-205ENST00000469687 USP5P45974 858 aa16.74■□□□□ 0.27
CBWD3-205ENST00000469687 GRAPQ13588 217 aa16.74■□□□□ 0.27
CBWD3-205ENST00000469687 IL17AQ16552 155 aa16.74■□□□□ 0.27
CBWD3-205ENST00000469687 C12orf60Q5U649 245 aa16.74■□□□□ 0.27
CBWD3-205ENST00000469687 USP17L1Q7RTZ2 530 aa16.74■□□□□ 0.27
CBWD3-205ENST00000469687 SMYD4Q8IYR2 804 aaPredicted RBP16.74■□□□□ 0.27
CBWD3-205ENST00000469687 PDCL2Q8N4E4 241 aa16.74■□□□□ 0.27
CBWD3-205ENST00000469687 GRAPLQ8TC17 118 aaPredicted RBP16.74■□□□□ 0.27
CBWD3-205ENST00000469687 ENOX1Q8TC92 643 aaKnown RBP16.74■□□□□ 0.27
CBWD3-205ENST00000469687 CDK5RAP2Q96SN8 1893 aa16.74■□□□□ 0.27
CBWD3-205ENST00000469687 CCDC94Q9BW85 323 aaPredicted RBP16.74■□□□□ 0.27
CBWD3-205ENST00000469687 SLFN14P0C7P3 912 aa16.74■□□□□ 0.27
CBWD3-205ENST00000469687 MCM7P33993 719 aa16.74■□□□□ 0.27
CBWD3-205ENST00000469687 ATP2C1P98194 919 aaPredicted RBP16.74■□□□□ 0.27
CBWD3-205ENST00000469687 PPP4R3BQ5MIZ7 849 aa16.74■□□□□ 0.27
CBWD3-205ENST00000469687 KANK3Q6NY19 840 aa16.74■□□□□ 0.27
CBWD3-205ENST00000469687 FAM196AQ6ZSG2 479 aa16.74■□□□□ 0.27
CBWD3-205ENST00000469687 SH3RF1Q7Z6J0 888 aa16.74■□□□□ 0.27
CBWD3-205ENST00000469687 FERMT2Q96AC1 680 aa16.74■□□□□ 0.27
CBWD3-205ENST00000469687 TMX1Q9H3N1 280 aa16.74■□□□□ 0.27
CBWD3-205ENST00000469687 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.74■□□□□ 0.27
CBWD3-205ENST00000469687 ZNF215Q9UL58 517 aaPredicted RBP16.74■□□□□ 0.27
CBWD3-205ENST00000469687 MTMR7Q9Y216 660 aa16.74■□□□□ 0.27
CBWD3-205ENST00000469687 MORC2Q9Y6X9 1032 aaPredicted RBP16.74■□□□□ 0.27
CBWD3-205ENST00000469687 V9GYY5 206 aaPredicted RBP16.74■□□□□ 0.27
CBWD3-205ENST00000469687 NAV1Q8NEY1 1877 aa16.73■□□□□ 0.27
CBWD3-205ENST00000469687 FAM205AQ6ZU69 1335 aa16.73■□□□□ 0.27
CBWD3-205ENST00000469687 PSDA5PKW4 1024 aaPredicted RBP16.73■□□□□ 0.27
CBWD3-205ENST00000469687 CDK11BP21127 795 aaKnown RBP16.73■□□□□ 0.27
CBWD3-205ENST00000469687 GLIPR1L2Q4G1C9 344 aa16.73■□□□□ 0.27
CBWD3-205ENST00000469687 TRAPPC3LQ5T215 181 aa16.73■□□□□ 0.27
CBWD3-205ENST00000469687 KLHL10Q6JEL2 608 aa16.73■□□□□ 0.27
CBWD3-205ENST00000469687 TRIML1Q8N9V2 468 aa16.73■□□□□ 0.27
CBWD3-205ENST00000469687 RASGRP4Q8TDF6 673 aa16.73■□□□□ 0.27
CBWD3-205ENST00000469687 PLCD1P51178 756 aa16.72■□□□□ 0.27
CBWD3-205ENST00000469687 STX17P56962 302 aa16.72■□□□□ 0.27
CBWD3-205ENST00000469687 SLC35G1Q2M3R5 365 aa16.72■□□□□ 0.27
CBWD3-205ENST00000469687 SPTY2D1Q68D10 685 aaPredicted RBP16.72■□□□□ 0.27
CBWD3-205ENST00000469687 TYW1BQ6NUM6 668 aa16.72■□□□□ 0.27
CBWD3-205ENST00000469687 SYT10Q6XYQ8 523 aa16.72■□□□□ 0.27
CBWD3-205ENST00000469687 RASGRP2Q7LDG7 609 aa16.72■□□□□ 0.27
CBWD3-205ENST00000469687 PNMA1Q8ND90 353 aa16.72■□□□□ 0.27
CBWD3-205ENST00000469687 KIF18AQ8NI77 898 aa16.72■□□□□ 0.27
CBWD3-205ENST00000469687 TGFBRAP1Q8WUH2 860 aa16.72■□□□□ 0.27
CBWD3-205ENST00000469687 KAT14Q9H8E8 782 aa16.72■□□□□ 0.27
CBWD3-205ENST00000469687 MYO1BO43795 1136 aa16.72■□□□□ 0.27
CBWD3-205ENST00000469687 KCNJ6P48051 423 aa16.72■□□□□ 0.27
CBWD3-205ENST00000469687 TMEM139Q8IV31 216 aa16.72■□□□□ 0.27
CBWD3-205ENST00000469687 CNBD1Q8NA66 436 aa16.72■□□□□ 0.27
CBWD3-205ENST00000469687 LRRC4BQ9NT99 713 aa16.72■□□□□ 0.27
CBWD3-205ENST00000469687 SAP30BPQ9UHR5 308 aaKnown RBP16.72■□□□□ 0.27
CBWD3-205ENST00000469687 DACH1Q9UI36 760 aa16.72■□□□□ 0.27
CBWD3-205ENST00000469687 UBAP1LF5GYI3 381 aa16.71■□□□□ 0.27
CBWD3-205ENST00000469687 COBLO75128 1261 aa16.71■□□□□ 0.27
CBWD3-205ENST00000469687 DPYDQ12882 1025 aa16.71■□□□□ 0.27
CBWD3-205ENST00000469687 TBX2Q13207 712 aaPredicted RBP16.71■□□□□ 0.27
CBWD3-205ENST00000469687 WDR66Q8TBY9 1149 aa16.71■□□□□ 0.27
CBWD3-205ENST00000469687 XDHP47989 1333 aa16.71■□□□□ 0.27
CBWD3-205ENST00000469687 BMP15O95972 392 aa16.71■□□□□ 0.27
CBWD3-205ENST00000469687 GPSM2P81274 684 aa16.71■□□□□ 0.27
CBWD3-205ENST00000469687 MAPKAPK5Q8IW41 473 aa16.71■□□□□ 0.27
CBWD3-205ENST00000469687 BLZF1Q9H2G9 400 aa16.71■□□□□ 0.27
CBWD3-205ENST00000469687 LEMD3Q9Y2U8 911 aa16.71■□□□□ 0.27
CBWD3-205ENST00000469687 FANCGO15287 622 aa16.7■□□□□ 0.26
CBWD3-205ENST00000469687 NRDCO43847 1150 aa16.7■□□□□ 0.26
CBWD3-205ENST00000469687 CDC25AP30304 524 aa16.7■□□□□ 0.26
CBWD3-205ENST00000469687 ADKP55263 362 aaKnown RBP16.7■□□□□ 0.26
CBWD3-205ENST00000469687 CUL4BQ13620 913 aa16.7■□□□□ 0.26
CBWD3-205ENST00000469687 PRR5LQ6MZQ0 368 aa16.7■□□□□ 0.26
CBWD3-205ENST00000469687 MTRQ99707 1265 aa16.7■□□□□ 0.26
CBWD3-205ENST00000469687 MKNK2Q9HBH9 465 aa16.7■□□□□ 0.26
CBWD3-205ENST00000469687 MAD2L2Q9UI95 211 aa16.7■□□□□ 0.26
CBWD3-205ENST00000469687 CYTH3O43739 400 aa16.7■□□□□ 0.26
CBWD3-205ENST00000469687 KIF5BP33176 963 aa16.7■□□□□ 0.26
CBWD3-205ENST00000469687 SYCP1Q15431 976 aa16.7■□□□□ 0.26
CBWD3-205ENST00000469687 E2F4Q16254 413 aa16.7■□□□□ 0.26
CBWD3-205ENST00000469687 LRRN4CLQ8ND94 238 aa16.7■□□□□ 0.26
CBWD3-205ENST00000469687 TEX33O43247 280 aa16.69■□□□□ 0.26
CBWD3-205ENST00000469687 ERCC5P28715 1186 aaPredicted RBP16.69■□□□□ 0.26
CBWD3-205ENST00000469687 DHX8Q14562 1220 aaKnown RBP16.69■□□□□ 0.26
CBWD3-205ENST00000469687 SPECC1LQ69YQ0 1117 aa16.69■□□□□ 0.26
CBWD3-205ENST00000469687 APTXQ7Z2E3 356 aaKnown RBP16.69■□□□□ 0.26
CBWD3-205ENST00000469687 DGKHQ86XP1 1220 aa16.69■□□□□ 0.26
CBWD3-205ENST00000469687 TC2NQ8N9U0 490 aa16.69■□□□□ 0.26
CBWD3-205ENST00000469687 NOL10Q9BSC4 688 aaKnown RBP16.69■□□□□ 0.26
CBWD3-205ENST00000469687 RTFDC1Q9BY42 306 aaPredicted RBP16.69■□□□□ 0.26
CBWD3-205ENST00000469687 CPVLQ9H3G5 476 aa16.69■□□□□ 0.26
CBWD3-205ENST00000469687 ROBO3Q96MS0 1386 aa16.69■□□□□ 0.26
CBWD3-205ENST00000469687 SYNRGQ9UMZ2 1314 aa16.69■□□□□ 0.26
CBWD3-205ENST00000469687 PPP1R3GB7ZBB8 358 aa16.68■□□□□ 0.26
CBWD3-205ENST00000469687 KIF2AO00139 706 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms