RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 LRRC2Q9BYS8 371 aa9.57□□□□□ -0.88
NPHP3-204ENST00000469232 FAM217BQ9NTX9 383 aaPredicted RBP9.57□□□□□ -0.88
NPHP3-204ENST00000469232 NYAP2Q9P242 653 aa9.57□□□□□ -0.88
NPHP3-204ENST00000469232 TSPY3P0CV98 308 aa9.56□□□□□ -0.88
NPHP3-204ENST00000469232 TSPY8P0CW00 308 aa9.56□□□□□ -0.88
NPHP3-204ENST00000469232 SNHG28P0DPA3 235 aa9.56□□□□□ -0.88
NPHP3-204ENST00000469232 CAP2P40123 477 aa9.56□□□□□ -0.88
NPHP3-204ENST00000469232 APOBRQ0VD83 1088 aa9.56□□□□□ -0.88
NPHP3-204ENST00000469232 WTAPQ15007 396 aa9.56□□□□□ -0.88
NPHP3-204ENST00000469232 CERKLQ49MI3 558 aaPredicted RBP9.56□□□□□ -0.88
NPHP3-204ENST00000469232 ARSIQ5FYB1 569 aa9.56□□□□□ -0.88
NPHP3-204ENST00000469232 TMEM179Q6ZVK1 233 aa9.56□□□□□ -0.88
NPHP3-204ENST00000469232 ZSCAN29Q8IWY8 852 aaPredicted RBP9.56□□□□□ -0.88
NPHP3-204ENST00000469232 CRACR2BQ8N4Y2 399 aaPredicted RBP9.56□□□□□ -0.88
NPHP3-204ENST00000469232 LLPHQ9BRT6 129 aaKnown RBP9.56□□□□□ -0.88
NPHP3-204ENST00000469232 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.56□□□□□ -0.88
NPHP3-204ENST00000469232 NMT2O60551 498 aa9.56□□□□□ -0.88
NPHP3-204ENST00000469232 CTNND1O60716 968 aaKnown RBP9.56□□□□□ -0.88
NPHP3-204ENST00000469232 DDAH1O94760 285 aa9.56□□□□□ -0.88
NPHP3-204ENST00000469232 TOP1P11387 765 aaKnown RBP9.56□□□□□ -0.88
NPHP3-204ENST00000469232 FOXK1P85037 733 aa9.56□□□□□ -0.88
NPHP3-204ENST00000469232 NTRK3Q16288 839 aa9.56□□□□□ -0.88
NPHP3-204ENST00000469232 MAP3K11Q16584 847 aa9.56□□□□□ -0.88
NPHP3-204ENST00000469232 SLC4A8Q2Y0W8 1093 aa9.56□□□□□ -0.88
NPHP3-204ENST00000469232 SUPT20HL1Q3ZLR7 823 aa9.56□□□□□ -0.88
NPHP3-204ENST00000469232 NOL9Q5SY16 702 aaKnown RBP9.56□□□□□ -0.88
NPHP3-204ENST00000469232 DCAF15Q66K64 600 aa9.56□□□□□ -0.88
NPHP3-204ENST00000469232 ZNF654Q8IZM8 581 aa9.56□□□□□ -0.88
NPHP3-204ENST00000469232 RGS22Q8NE09 1264 aa9.56□□□□□ -0.88
NPHP3-204ENST00000469232 SMARCC2Q8TAQ2 1214 aa9.56□□□□□ -0.88
NPHP3-204ENST00000469232 DCPSQ96C86 337 aaKnown RBP9.56□□□□□ -0.88
NPHP3-204ENST00000469232 CHMP4CQ96CF2 233 aa9.56□□□□□ -0.88
NPHP3-204ENST00000469232 KLRG1Q96E93 195 aa9.56□□□□□ -0.88
NPHP3-204ENST00000469232 CEP95Q96GE4 821 aa9.56□□□□□ -0.88
NPHP3-204ENST00000469232 KANSL2Q9H9L4 492 aa9.56□□□□□ -0.88
NPHP3-204ENST00000469232 TOMM22Q9NS69 142 aa9.56□□□□□ -0.88
NPHP3-204ENST00000469232 KLF18A0A0U1RQI7 1052 aa9.55□□□□□ -0.88
NPHP3-204ENST00000469232 ERICH2A1L162 156 aa9.55□□□□□ -0.88
NPHP3-204ENST00000469232 UNCXA6NJT0 531 aa9.55□□□□□ -0.88
NPHP3-204ENST00000469232 FAM196BA6NMK8 535 aa9.55□□□□□ -0.88
NPHP3-204ENST00000469232 SLC34A2O95436 690 aa9.55□□□□□ -0.88
NPHP3-204ENST00000469232 FUT2Q10981 343 aa9.55□□□□□ -0.88
NPHP3-204ENST00000469232 SCRN1Q12765 414 aa9.55□□□□□ -0.88
NPHP3-204ENST00000469232 ABCB5Q2M3G0 1257 aa9.55□□□□□ -0.88
NPHP3-204ENST00000469232 IFIT1BQ5T764 474 aaKnown RBP9.55□□□□□ -0.88
NPHP3-204ENST00000469232 CDC37L1Q7L3B6 337 aa9.55□□□□□ -0.88
NPHP3-204ENST00000469232 KRT26Q7Z3Y9 468 aa9.55□□□□□ -0.88
NPHP3-204ENST00000469232 LDHDQ86WU2 507 aa9.55□□□□□ -0.88
NPHP3-204ENST00000469232 SULF1Q8IWU6 871 aa9.55□□□□□ -0.88
NPHP3-204ENST00000469232 STK11IPQ8N1F8 1099 aa9.55□□□□□ -0.88
NPHP3-204ENST00000469232 KHSRPQ92945 711 aaKnown RBP eCLIP9.55□□□□□ -0.886e-7■□□□□ 8.3
NPHP3-204ENST00000469232 TMEM47Q9BQJ4 181 aa9.55□□□□□ -0.88
NPHP3-204ENST00000469232 ZKSCAN3Q9BRR0 538 aa9.55□□□□□ -0.88
NPHP3-204ENST00000469232 ZNF341Q9BYN7 854 aa9.55□□□□□ -0.88
NPHP3-204ENST00000469232 ZBTB21Q9ULJ3 1066 aa9.55□□□□□ -0.88
NPHP3-204ENST00000469232 ZBTB43O43298 467 aa9.54□□□□□ -0.88
NPHP3-204ENST00000469232 USP2O75604 605 aaPredicted RBP9.54□□□□□ -0.88
NPHP3-204ENST00000469232 CTDNEP1O95476 244 aa9.54□□□□□ -0.88
NPHP3-204ENST00000469232 TTLL1O95922 423 aa9.54□□□□□ -0.88
NPHP3-204ENST00000469232 ASNSP08243 561 aa9.54□□□□□ -0.88
NPHP3-204ENST00000469232 CALM1P0DP23 149 aa9.54□□□□□ -0.88
NPHP3-204ENST00000469232 CALM2P0DP24 149 aa9.54□□□□□ -0.88
NPHP3-204ENST00000469232 CALM3P0DP25 149 aa9.54□□□□□ -0.88
NPHP3-204ENST00000469232 SMARCA1P28370 1054 aa9.54□□□□□ -0.88
NPHP3-204ENST00000469232 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.54□□□□□ -0.88
NPHP3-204ENST00000469232 BBXQ8WY36 941 aaPredicted RBP9.54□□□□□ -0.88
NPHP3-204ENST00000469232 CWC22Q9HCG8 908 aaKnown RBP9.54□□□□□ -0.88
NPHP3-204ENST00000469232 SLC12A7Q9Y666 1083 aa9.54□□□□□ -0.88
NPHP3-204ENST00000469232 DOCK1Q14185 1865 aa9.53□□□□□ -0.88
NPHP3-204ENST00000469232 PALM3A6NDB9 673 aaPredicted RBP9.53□□□□□ -0.88
NPHP3-204ENST00000469232 CCDC69A6NI79 296 aa9.53□□□□□ -0.88
NPHP3-204ENST00000469232 GOLGA8BA8MQT2 603 aa9.53□□□□□ -0.88
NPHP3-204ENST00000469232 GH2P01242 217 aa9.53□□□□□ -0.88
NPHP3-204ENST00000469232 FGD1P98174 961 aa9.53□□□□□ -0.88
NPHP3-204ENST00000469232 DSG2Q14126 1118 aa9.53□□□□□ -0.88
NPHP3-204ENST00000469232 GRM4Q14833 912 aa9.53□□□□□ -0.88
NPHP3-204ENST00000469232 SEPT2Q15019 361 aa9.53□□□□□ -0.88
NPHP3-204ENST00000469232 SHROOM1Q2M3G4 852 aaPredicted RBP9.53□□□□□ -0.88
NPHP3-204ENST00000469232 MIGA2Q7L4E1 593 aa9.53□□□□□ -0.88
NPHP3-204ENST00000469232 CATIPQ7Z7H3 387 aa9.53□□□□□ -0.88
NPHP3-204ENST00000469232 PLPP6Q8IY26 295 aa9.53□□□□□ -0.88
NPHP3-204ENST00000469232 FANCBQ8NB91 859 aa9.53□□□□□ -0.88
NPHP3-204ENST00000469232 PNMA1Q8ND90 353 aa9.53□□□□□ -0.88
NPHP3-204ENST00000469232 NSUN7Q8NE18 718 aaKnown RBP9.53□□□□□ -0.88
NPHP3-204ENST00000469232 GMCL1P1Q8NEA9 526 aa9.53□□□□□ -0.88
NPHP3-204ENST00000469232 LARP6Q9BRS8 491 aaKnown RBP9.53□□□□□ -0.88
NPHP3-204ENST00000469232 WDR18Q9BV38 432 aa9.53□□□□□ -0.88
NPHP3-204ENST00000469232 TRIM34Q9BYJ4 488 aa9.53□□□□□ -0.88
NPHP3-204ENST00000469232 SLKQ9H2G2 1235 aaPredicted RBP9.53□□□□□ -0.88
NPHP3-204ENST00000469232 RRAGCQ9HB90 399 aa9.53□□□□□ -0.88
NPHP3-204ENST00000469232 ATAD5Q96QE3 1844 aa9.53□□□□□ -0.88
NPHP3-204ENST00000469232 STK36Q9NRP7 1315 aa9.53□□□□□ -0.88
NPHP3-204ENST00000469232 PHIPQ8WWQ0 1821 aa9.53□□□□□ -0.88
NPHP3-204ENST00000469232 CCDC196A0A1B0GTZ2 297 aa9.53□□□□□ -0.88
NPHP3-204ENST00000469232 ADM5C9JUS6 153 aa9.53□□□□□ -0.88
NPHP3-204ENST00000469232 DHX16O60231 1041 aaKnown RBP9.53□□□□□ -0.88
NPHP3-204ENST00000469232 EEF2P13639 858 aaKnown RBP9.53□□□□□ -0.88
NPHP3-204ENST00000469232 IFNAR1P17181 557 aa9.53□□□□□ -0.88
NPHP3-204ENST00000469232 CDC27P30260 824 aa9.53□□□□□ -0.88
NPHP3-204ENST00000469232 LDLRAD1Q5T700 205 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms