RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 RPS8P62241 208 aaKnown RBP16.18■□□□□ 0.18
SMARCD3-205ENST00000469154 PPARAQ07869 468 aa16.18■□□□□ 0.18
SMARCD3-205ENST00000469154 NR5A1Q13285 461 aa16.18■□□□□ 0.18
SMARCD3-205ENST00000469154 PDILTQ8N807 584 aa16.18■□□□□ 0.18
SMARCD3-205ENST00000469154 RPGRQ92834 1020 aaKnown RBP16.18■□□□□ 0.18
SMARCD3-205ENST00000469154 RAI14Q9P0K7 980 aa16.18■□□□□ 0.18
SMARCD3-205ENST00000469154 EFCAB8A8MWE9 144 aa16.17■□□□□ 0.18
SMARCD3-205ENST00000469154 CRY2Q49AN0 593 aa16.17■□□□□ 0.18
SMARCD3-205ENST00000469154 TC2NQ8N9U0 490 aa16.17■□□□□ 0.18
SMARCD3-205ENST00000469154 SPATA20Q8TB22 786 aa16.17■□□□□ 0.18
SMARCD3-205ENST00000469154 NUP133Q8WUM0 1156 aa16.17■□□□□ 0.18
SMARCD3-205ENST00000469154 BRIP1Q9BX63 1249 aa16.17■□□□□ 0.18
SMARCD3-205ENST00000469154 AATFQ9NY61 560 aaKnown RBP eCLIP16.17■□□□□ 0.18
SMARCD3-205ENST00000469154 DUOX1Q9NRD9 1551 aa16.17■□□□□ 0.18
SMARCD3-205ENST00000469154 AKAP17AQ02040 695 aaKnown RBP16.17■□□□□ 0.18
SMARCD3-205ENST00000469154 TERF2Q15554 542 aa16.17■□□□□ 0.18
SMARCD3-205ENST00000469154 CREBRFQ8IUR6 639 aa16.17■□□□□ 0.18
SMARCD3-205ENST00000469154 SLC16A10Q8TF71 515 aa16.17■□□□□ 0.18
SMARCD3-205ENST00000469154 ANAPC4Q9UJX5 808 aa16.17■□□□□ 0.18
SMARCD3-205ENST00000469154 CASZ1Q86V15 1759 aa16.16■□□□□ 0.18
SMARCD3-205ENST00000469154 TRIM75PA6NK02 468 aa16.16■□□□□ 0.18
SMARCD3-205ENST00000469154 ZBTB7AO95365 584 aa16.16■□□□□ 0.18
SMARCD3-205ENST00000469154 CASQ1P31415 396 aa16.16■□□□□ 0.18
SMARCD3-205ENST00000469154 ESR2Q92731 530 aa16.16■□□□□ 0.18
SMARCD3-205ENST00000469154 CSRNP2Q9H175 543 aa16.16■□□□□ 0.18
SMARCD3-205ENST00000469154 LRP2BPQ9P2M1 347 aa16.16■□□□□ 0.18
SMARCD3-205ENST00000469154 BMP15O95972 392 aa16.16■□□□□ 0.18
SMARCD3-205ENST00000469154 SEC23AQ15436 765 aa16.16■□□□□ 0.18
SMARCD3-205ENST00000469154 PTPN21Q16825 1174 aa16.16■□□□□ 0.18
SMARCD3-205ENST00000469154 TRMT44Q8IYL2 757 aaKnown RBP16.16■□□□□ 0.18
SMARCD3-205ENST00000469154 OXER1Q8TDS5 423 aa16.16■□□□□ 0.18
SMARCD3-205ENST00000469154 CABP5Q9NP86 173 aa16.16■□□□□ 0.18
SMARCD3-205ENST00000469154 BSDC1Q9NW68 430 aaPredicted RBP16.16■□□□□ 0.18
SMARCD3-205ENST00000469154 SNAP23O00161 211 aa16.15■□□□□ 0.18
SMARCD3-205ENST00000469154 FANCGO15287 622 aa16.15■□□□□ 0.18
SMARCD3-205ENST00000469154 IGSF3O75054 1194 aa16.15■□□□□ 0.18
SMARCD3-205ENST00000469154 BCAMP50895 628 aa16.15■□□□□ 0.18
SMARCD3-205ENST00000469154 CHRNDQ07001 517 aa16.15■□□□□ 0.18
SMARCD3-205ENST00000469154 HSP90AA4PQ58FG1 418 aa16.15■□□□□ 0.18
SMARCD3-205ENST00000469154 TMCO3Q6UWJ1 677 aa16.15■□□□□ 0.18
SMARCD3-205ENST00000469154 GRAMD1CQ8IYS0 662 aa16.15■□□□□ 0.18
SMARCD3-205ENST00000469154 CCDC82Q8N4S0 544 aa16.15■□□□□ 0.18
SMARCD3-205ENST00000469154 MIGA1Q8NAN2 632 aa16.15■□□□□ 0.18
SMARCD3-205ENST00000469154 CARD6Q9BX69 1037 aa16.15■□□□□ 0.18
SMARCD3-205ENST00000469154 TNKSO95271 1327 aa16.15■□□□□ 0.18
SMARCD3-205ENST00000469154 A0A1B0GTH6 734 aa16.15■□□□□ 0.18
SMARCD3-205ENST00000469154 KRT2P35908 639 aa16.15■□□□□ 0.18
SMARCD3-205ENST00000469154 NR1I3Q14994 352 aa16.15■□□□□ 0.18
SMARCD3-205ENST00000469154 CMTR1Q8N1G2 835 aaKnown RBP16.15■□□□□ 0.18
SMARCD3-205ENST00000469154 FHOD1Q9Y613 1164 aa16.15■□□□□ 0.18
SMARCD3-205ENST00000469154 KLRG2A4D1S0 409 aaPredicted RBP16.14■□□□□ 0.17
SMARCD3-205ENST00000469154 ATP2B1P20020 1258 aa16.14■□□□□ 0.17
SMARCD3-205ENST00000469154 CYP7A1P22680 504 aa16.14■□□□□ 0.17
SMARCD3-205ENST00000469154 GNG11P61952 73 aa16.14■□□□□ 0.17
SMARCD3-205ENST00000469154 GRAPQ13588 217 aa16.14■□□□□ 0.17
SMARCD3-205ENST00000469154 GRAPLQ8TC17 118 aaPredicted RBP16.14■□□□□ 0.17
SMARCD3-205ENST00000469154 MINPP1Q9UNW1 487 aa16.14■□□□□ 0.17
SMARCD3-205ENST00000469154 NRXN2Q9P2S2 1712 aa16.14■□□□□ 0.17
SMARCD3-205ENST00000469154 BAZ2AQ9UIF9 1905 aaKnown RBP16.14■□□□□ 0.17
SMARCD3-205ENST00000469154 ADKP55263 362 aaKnown RBP16.14■□□□□ 0.17
SMARCD3-205ENST00000469154 SPATA1Q5VX52 437 aa16.14■□□□□ 0.17
SMARCD3-205ENST00000469154 TOGARAM2Q6ZUX3 1019 aa16.14■□□□□ 0.17
SMARCD3-205ENST00000469154 FERMT2Q96AC1 680 aa16.14■□□□□ 0.17
SMARCD3-205ENST00000469154 PANX2Q96RD6 677 aa16.14■□□□□ 0.17
SMARCD3-205ENST00000469154 PHF20Q9BVI0 1012 aa16.14■□□□□ 0.17
SMARCD3-205ENST00000469154 SAMSN1Q9NSI8 373 aaKnown RBP16.14■□□□□ 0.17
SMARCD3-205ENST00000469154 RBM28Q9NW13 759 aaKnown RBP16.14■□□□□ 0.17
SMARCD3-205ENST00000469154 CACNA1SQ13698 1873 aa16.14■□□□□ 0.17
SMARCD3-205ENST00000469154 SYNRGQ9UMZ2 1314 aa16.13■□□□□ 0.17
SMARCD3-205ENST00000469154 MAGEB6P1A0A0J9YX57 407 aa16.13■□□□□ 0.17
SMARCD3-205ENST00000469154 AKR1B15C9JRZ8 316 aaPredicted RBP16.13■□□□□ 0.17
SMARCD3-205ENST00000469154 PRPF3O43395 683 aaKnown RBP16.13■□□□□ 0.17
SMARCD3-205ENST00000469154 ZRANB2O95218 330 aaKnown RBP eCLIP16.13■□□□□ 0.17
SMARCD3-205ENST00000469154 PNMA6AP0CW24 399 aaPredicted RBP16.13■□□□□ 0.17
SMARCD3-205ENST00000469154 PDE6BP35913 854 aa16.13■□□□□ 0.17
SMARCD3-205ENST00000469154 MAP3K9P80192 1104 aa16.13■□□□□ 0.17
SMARCD3-205ENST00000469154 SLC51AQ86UW1 340 aa16.13■□□□□ 0.17
SMARCD3-205ENST00000469154 DHX58Q96C10 678 aa16.13■□□□□ 0.17
SMARCD3-205ENST00000469154 RBM17Q96I25 401 aaKnown RBP16.13■□□□□ 0.17
SMARCD3-205ENST00000469154 MED15Q96RN5 788 aa16.13■□□□□ 0.17
SMARCD3-205ENST00000469154 NAA15Q9BXJ9 866 aaKnown RBP16.13■□□□□ 0.17
SMARCD3-205ENST00000469154 BRMS1Q9HCU9 246 aa16.13■□□□□ 0.17
SMARCD3-205ENST00000469154 ATF5Q9Y2D1 282 aaPredicted RBP16.13■□□□□ 0.17
SMARCD3-205ENST00000469154 MYH13Q9UKX3 1938 aa16.13■□□□□ 0.17
SMARCD3-205ENST00000469154 LAMB1P07942 1786 aa16.13■□□□□ 0.17
SMARCD3-205ENST00000469154 MINDY4BA8MYZ0 360 aa16.13■□□□□ 0.17
SMARCD3-205ENST00000469154 SEMA3EO15041 775 aa16.13■□□□□ 0.17
SMARCD3-205ENST00000469154 ATP8B1O43520 1251 aa16.13■□□□□ 0.17
SMARCD3-205ENST00000469154 TAF3Q5VWG9 929 aa16.13■□□□□ 0.17
SMARCD3-205ENST00000469154 USP49Q70CQ1 688 aa16.13■□□□□ 0.17
SMARCD3-205ENST00000469154 SH3RF1Q7Z6J0 888 aa16.13■□□□□ 0.17
SMARCD3-205ENST00000469154 MRFAP1Q9Y605 127 aa16.13■□□□□ 0.17
SMARCD3-205ENST00000469154 CALM1P0DP23 149 aa16.12■□□□□ 0.17
SMARCD3-205ENST00000469154 CALM2P0DP24 149 aa16.12■□□□□ 0.17
SMARCD3-205ENST00000469154 CALM3P0DP25 149 aa16.12■□□□□ 0.17
SMARCD3-205ENST00000469154 SRGNP10124 158 aa16.12■□□□□ 0.17
SMARCD3-205ENST00000469154 HOXA10P31260 410 aaPredicted RBP16.12■□□□□ 0.17
SMARCD3-205ENST00000469154 CATIPQ7Z7H3 387 aa16.12■□□□□ 0.17
SMARCD3-205ENST00000469154 FAM177A1Q8N128 213 aaPredicted RBP16.12■□□□□ 0.17
SMARCD3-205ENST00000469154 ZSCAN10Q96SZ4 725 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms