RNA–Protein interactions for RNA: ENST00000469147.5

TRAPPC12-215, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 1,002 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-215ENST00000469147 NEDD1Q8NHV4 660 aa11.38□□□□□ -0.59
TRAPPC12-215ENST00000469147 TRIM47Q96LD4 638 aa11.38□□□□□ -0.59
TRAPPC12-215ENST00000469147 KIAA1683Q9H0B3 1180 aa11.38□□□□□ -0.59
TRAPPC12-215ENST00000469147 SH2D4AQ9H788 454 aa11.38□□□□□ -0.59
TRAPPC12-215ENST00000469147 CNNM2Q9H8M5 875 aa11.38□□□□□ -0.59
TRAPPC12-215ENST00000469147 ARHGEF10LQ9HCE6 1279 aa11.38□□□□□ -0.59
TRAPPC12-215ENST00000469147 ANO2Q9NQ90 1003 aa11.38□□□□□ -0.59
TRAPPC12-215ENST00000469147 SYNPO2Q9UMS6 1093 aa11.38□□□□□ -0.59
TRAPPC12-215ENST00000469147 SLC45A1Q9Y2W3 748 aa11.38□□□□□ -0.59
TRAPPC12-215ENST00000469147 LOC285556D6RIA3 1793 aa11.37□□□□□ -0.59
TRAPPC12-215ENST00000469147 IGKV6D-41A0A0C4DH26 115 aa11.37□□□□□ -0.59
TRAPPC12-215ENST00000469147 TSPY2A6NKD2 308 aa11.37□□□□□ -0.59
TRAPPC12-215ENST00000469147 PRDM1O75626 825 aa11.37□□□□□ -0.59
TRAPPC12-215ENST00000469147 TSPY3P0CV98 308 aa11.37□□□□□ -0.59
TRAPPC12-215ENST00000469147 TSPY8P0CW00 308 aa11.37□□□□□ -0.59
TRAPPC12-215ENST00000469147 UBXN2AP68543 259 aa11.37□□□□□ -0.59
TRAPPC12-215ENST00000469147 LACTBP83111 547 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC12-215ENST00000469147 GADL1Q6ZQY3 521 aa11.37□□□□□ -0.59
TRAPPC12-215ENST00000469147 ANKRD23Q86SG2 305 aa11.37□□□□□ -0.59
TRAPPC12-215ENST00000469147 TBC1D10CQ8IV04 446 aa11.37□□□□□ -0.59
TRAPPC12-215ENST00000469147 STK11IPQ8N1F8 1099 aa11.37□□□□□ -0.59
TRAPPC12-215ENST00000469147 ESR2Q92731 530 aa11.37□□□□□ -0.59
TRAPPC12-215ENST00000469147 ZNF333Q96JL9 665 aa11.37□□□□□ -0.59
TRAPPC12-215ENST00000469147 C12orf42Q96LP6 360 aa11.37□□□□□ -0.59
TRAPPC12-215ENST00000469147 FEZ1Q99689 392 aa11.37□□□□□ -0.59
TRAPPC12-215ENST00000469147 NBPF3Q9H094 633 aa11.37□□□□□ -0.59
TRAPPC12-215ENST00000469147 NYAP2Q9P242 653 aa11.37□□□□□ -0.59
TRAPPC12-215ENST00000469147 RBM8AQ9Y5S9 174 aaKnown RBP11.37□□□□□ -0.59
TRAPPC12-215ENST00000469147 CYP21A2P08686 494 aa11.36□□□□□ -0.59
TRAPPC12-215ENST00000469147 TFAP4Q01664 338 aa11.36□□□□□ -0.59
TRAPPC12-215ENST00000469147 PABPC4Q13310 644 aaKnown RBP eCLIP11.36□□□□□ -0.59
TRAPPC12-215ENST00000469147 MTMR2Q13614 643 aa11.36□□□□□ -0.59
TRAPPC12-215ENST00000469147 RNF20Q5VTR2 975 aa11.36□□□□□ -0.59
TRAPPC12-215ENST00000469147 USP17L2Q6R6M4 530 aa11.36□□□□□ -0.59
TRAPPC12-215ENST00000469147 C17orf99Q6UX52 265 aa11.36□□□□□ -0.59
TRAPPC12-215ENST00000469147 NKX2-3Q8TAU0 364 aa11.36□□□□□ -0.59
TRAPPC12-215ENST00000469147 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.36□□□□□ -0.59
TRAPPC12-215ENST00000469147 KRT23Q9C075 422 aa11.36□□□□□ -0.59
TRAPPC12-215ENST00000469147 TOMM22Q9NS69 142 aa11.36□□□□□ -0.59
TRAPPC12-215ENST00000469147 TMOD4Q9NZQ9 345 aa11.36□□□□□ -0.59
TRAPPC12-215ENST00000469147 AGTPBP1Q9UPW5 1226 aa11.36□□□□□ -0.59
TRAPPC12-215ENST00000469147 TMX2Q9Y320 296 aa11.36□□□□□ -0.59
TRAPPC12-215ENST00000469147 RANBP6O60518 1105 aaKnown RBP11.35□□□□□ -0.59
TRAPPC12-215ENST00000469147 TTLL1O95922 423 aa11.35□□□□□ -0.59
TRAPPC12-215ENST00000469147 HMGCS2P54868 508 aa11.35□□□□□ -0.59
TRAPPC12-215ENST00000469147 FCGRTP55899 365 aa11.35□□□□□ -0.59
TRAPPC12-215ENST00000469147 TRDNQ13061 729 aa11.35□□□□□ -0.59
TRAPPC12-215ENST00000469147 NECTIN1Q15223 517 aa11.35□□□□□ -0.59
TRAPPC12-215ENST00000469147 CCDC178Q5BJE1 867 aa11.35□□□□□ -0.59
TRAPPC12-215ENST00000469147 RRP12Q5JTH9 1297 aaKnown RBP11.35□□□□□ -0.59
TRAPPC12-215ENST00000469147 LPAR1Q92633 364 aa11.35□□□□□ -0.59
TRAPPC12-215ENST00000469147 PARK7Q99497 189 aaKnown RBP11.35□□□□□ -0.59
TRAPPC12-215ENST00000469147 TCP11L1Q9NUJ3 509 aa11.35□□□□□ -0.59
TRAPPC12-215ENST00000469147 MTMR4Q9NYA4 1195 aa11.35□□□□□ -0.59
TRAPPC12-215ENST00000469147 PNMA3Q9UL41 463 aa11.35□□□□□ -0.59
TRAPPC12-215ENST00000469147 TACC3Q9Y6A5 838 aa11.35□□□□□ -0.59
TRAPPC12-215ENST00000469147 NEDD4P46934 1319 aa11.35□□□□□ -0.59
TRAPPC12-215ENST00000469147 EEF2P13639 858 aaKnown RBP11.34□□□□□ -0.59
TRAPPC12-215ENST00000469147 GRK4P32298 578 aa11.34□□□□□ -0.59
TRAPPC12-215ENST00000469147 NOVP48745 357 aa11.34□□□□□ -0.59
TRAPPC12-215ENST00000469147 FAM47AQ5JRC9 791 aa11.34□□□□□ -0.59
TRAPPC12-215ENST00000469147 IQCA1Q86XH1 822 aa11.34□□□□□ -0.59
TRAPPC12-215ENST00000469147 CLEC10AQ8IUN9 316 aa11.34□□□□□ -0.59
TRAPPC12-215ENST00000469147 ACER1Q8TDN7 264 aa11.34□□□□□ -0.59
TRAPPC12-215ENST00000469147 SMCR8Q8TEV9 937 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC12-215ENST00000469147 MKL1Q969V6 931 aa11.34□□□□□ -0.59
TRAPPC12-215ENST00000469147 CEP95Q96GE4 821 aa11.34□□□□□ -0.59
TRAPPC12-215ENST00000469147 HTATIP2Q9BUP3 242 aa11.34□□□□□ -0.59
TRAPPC12-215ENST00000469147 RNF208Q9H0X6 261 aa11.34□□□□□ -0.59
TRAPPC12-215ENST00000469147 VCPKMTQ9H867 229 aa11.34□□□□□ -0.59
TRAPPC12-215ENST00000469147 GOPCQ9HD26 462 aa11.34□□□□□ -0.59
TRAPPC12-215ENST00000469147 EMILIN3Q9NT22 766 aa11.34□□□□□ -0.59
TRAPPC12-215ENST00000469147 SRRDQ9UH36 339 aa11.34□□□□□ -0.59
TRAPPC12-215ENST00000469147 MGAMO43451 1857 aa11.34□□□□□ -0.59
TRAPPC12-215ENST00000469147 MYPNQ86TC9 1320 aa11.34□□□□□ -0.59
TRAPPC12-215ENST00000469147 KIAA0100Q14667 2235 aaKnown RBP11.33□□□□□ -0.59
TRAPPC12-215ENST00000469147 A0A1W2PRG0 241 aa11.33□□□□□ -0.6
TRAPPC12-215ENST00000469147 SLC27A2O14975 620 aa11.33□□□□□ -0.6
TRAPPC12-215ENST00000469147 TFRCP02786 760 aaKnown RBP11.33□□□□□ -0.6
TRAPPC12-215ENST00000469147 BCRP11274 1271 aa11.33□□□□□ -0.6
TRAPPC12-215ENST00000469147 ZKSCAN1P17029 563 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC12-215ENST00000469147 HOXA7P31268 230 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC12-215ENST00000469147 TSGA10IPQ3SY00 556 aa11.33□□□□□ -0.6
TRAPPC12-215ENST00000469147 KIAA1755Q5JYT7 1200 aa11.33□□□□□ -0.6
TRAPPC12-215ENST00000469147 CREB3L3Q68CJ9 461 aa11.33□□□□□ -0.6
TRAPPC12-215ENST00000469147 RALYLQ86SE5 291 aaKnown RBP11.33□□□□□ -0.6
TRAPPC12-215ENST00000469147 SIAH1Q8IUQ4 282 aa11.33□□□□□ -0.6
TRAPPC12-215ENST00000469147 NCOA7Q8NI08 942 aa11.33□□□□□ -0.6
TRAPPC12-215ENST00000469147 TTC14Q96N46 770 aa11.33□□□□□ -0.6
TRAPPC12-215ENST00000469147 INCENPQ9NQS7 918 aa11.33□□□□□ -0.6
TRAPPC12-215ENST00000469147 PDE4DIPQ5VU43 2346 aa11.32□□□□□ -0.6
TRAPPC12-215ENST00000469147 B4E1Z4 1266 aa11.32□□□□□ -0.6
TRAPPC12-215ENST00000469147 E7EWF7 191 aa11.32□□□□□ -0.6
TRAPPC12-215ENST00000469147 WDR46O15213 610 aaKnown RBP11.32□□□□□ -0.6
TRAPPC12-215ENST00000469147 KDM4AO75164 1064 aa11.32□□□□□ -0.6
TRAPPC12-215ENST00000469147 VCAM1P19320 739 aa11.32□□□□□ -0.6
TRAPPC12-215ENST00000469147 OSBPP22059 807 aa11.32□□□□□ -0.6
TRAPPC12-215ENST00000469147 HSPA4P34932 840 aa11.32□□□□□ -0.6
TRAPPC12-215ENST00000469147 ATP2B2Q01814 1243 aa11.32□□□□□ -0.6
TRAPPC12-215ENST00000469147 KRT32Q14532 448 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms