RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 RASGRP2Q7LDG7 609 aa14.95□□□□□ -0.02
RUNX1-213ENST00000469087 NBPF11Q86T75 865 aa14.95□□□□□ -0.02
RUNX1-213ENST00000469087 USP48Q86UV5 1035 aa14.95□□□□□ -0.02
RUNX1-213ENST00000469087 STAG2Q8N3U4 1231 aa14.95□□□□□ -0.02
RUNX1-213ENST00000469087 CTCFLQ8NI51 663 aaPredicted RBP14.95□□□□□ -0.02
RUNX1-213ENST00000469087 HOOK2Q96ED9 719 aa14.95□□□□□ -0.02
RUNX1-213ENST00000469087 MAD2L2Q9UI95 211 aa14.95□□□□□ -0.02
RUNX1-213ENST00000469087 ZNF112Q9UJU3 913 aa14.95□□□□□ -0.02
RUNX1-213ENST00000469087 A0A1W2PRG0 241 aa14.94□□□□□ -0.02
RUNX1-213ENST00000469087 USP17L5A8MUK1 530 aa14.94□□□□□ -0.02
RUNX1-213ENST00000469087 CTNND1O60716 968 aaKnown RBP14.94□□□□□ -0.02
RUNX1-213ENST00000469087 INPP5BP32019 993 aa14.94□□□□□ -0.02
RUNX1-213ENST00000469087 PPP4R3BQ5MIZ7 849 aa14.94□□□□□ -0.02
RUNX1-213ENST00000469087 CPLX2Q6PUV4 134 aaKnown RBP14.94□□□□□ -0.02
RUNX1-213ENST00000469087 USP17L2Q6R6M4 530 aa14.94□□□□□ -0.02
RUNX1-213ENST00000469087 SRBD1Q8N5C6 995 aaKnown RBP14.94□□□□□ -0.02
RUNX1-213ENST00000469087 ZNF341Q9BYN7 854 aa14.94□□□□□ -0.02
RUNX1-213ENST00000469087 RBM28Q9NW13 759 aaKnown RBP14.94□□□□□ -0.02
RUNX1-213ENST00000469087 ORC3Q9UBD5 711 aaPredicted RBP14.94□□□□□ -0.02
RUNX1-213ENST00000469087 SSC5DA1L4H1 1573 aa14.94□□□□□ -0.02
RUNX1-213ENST00000469087 PALM3A6NDB9 673 aaPredicted RBP14.93□□□□□ -0.02
RUNX1-213ENST00000469087 UBE2Q2LH0YL09 131 aa14.93□□□□□ -0.02
RUNX1-213ENST00000469087 CDKL5O76039 1030 aa14.93□□□□□ -0.02
RUNX1-213ENST00000469087 ASNSP08243 561 aa14.93□□□□□ -0.02
RUNX1-213ENST00000469087 GOLGA8HP0CJ92 632 aa14.93□□□□□ -0.02
RUNX1-213ENST00000469087 NUCB2P80303 420 aa14.93□□□□□ -0.02
RUNX1-213ENST00000469087 TMTC3Q6ZXV5 915 aa14.93□□□□□ -0.02
RUNX1-213ENST00000469087 FAM184AQ8NB25 1140 aa14.93□□□□□ -0.02
RUNX1-213ENST00000469087 KLRG1Q96E93 195 aa14.93□□□□□ -0.02
RUNX1-213ENST00000469087 STX6O43752 255 aa14.93□□□□□ -0.02
RUNX1-213ENST00000469087 USP2O75604 605 aaPredicted RBP14.93□□□□□ -0.02
RUNX1-213ENST00000469087 SNHG28P0DPA3 235 aa14.93□□□□□ -0.02
RUNX1-213ENST00000469087 PDHBP11177 359 aa14.93□□□□□ -0.02
RUNX1-213ENST00000469087 KIF5BP33176 963 aa14.93□□□□□ -0.02
RUNX1-213ENST00000469087 ECE1P42892 770 aa14.93□□□□□ -0.02
RUNX1-213ENST00000469087 PRKG1Q13976 671 aa14.93□□□□□ -0.02
RUNX1-213ENST00000469087 CDC37L1Q7L3B6 337 aa14.93□□□□□ -0.02
RUNX1-213ENST00000469087 CCDC84Q86UT8 332 aaPredicted RBP14.93□□□□□ -0.02
RUNX1-213ENST00000469087 ACER1Q8TDN7 264 aa14.93□□□□□ -0.02
RUNX1-213ENST00000469087 ZKSCAN4Q969J2 545 aaPredicted RBP14.93□□□□□ -0.02
RUNX1-213ENST00000469087 SLC26A6Q9BXS9 759 aa14.93□□□□□ -0.02
RUNX1-213ENST00000469087 GLIS2Q9BZE0 524 aaPredicted RBP14.93□□□□□ -0.02
RUNX1-213ENST00000469087 CLEC11AQ9Y240 323 aa14.93□□□□□ -0.02
RUNX1-213ENST00000469087 FMNL1O95466 1100 aaPredicted RBP14.92□□□□□ -0.02
RUNX1-213ENST00000469087 BRD1O95696 1058 aa14.92□□□□□ -0.02
RUNX1-213ENST00000469087 SSRP1Q08945 709 aaKnown RBP14.92□□□□□ -0.02
RUNX1-213ENST00000469087 WRNIP1Q96S55 665 aa14.92□□□□□ -0.02
RUNX1-213ENST00000469087 ATAD5Q96QE3 1844 aa14.91□□□□□ -0.02
RUNX1-213ENST00000469087 KLRF2D3W0D1 207 aa14.91□□□□□ -0.02
RUNX1-213ENST00000469087 F5H6K3 240 aa14.91□□□□□ -0.02
RUNX1-213ENST00000469087 PARP1P09874 1014 aaKnown RBP14.91□□□□□ -0.02
RUNX1-213ENST00000469087 KLRC3Q07444 240 aa14.91□□□□□ -0.02
RUNX1-213ENST00000469087 SLC35G1Q2M3R5 365 aa14.91□□□□□ -0.02
RUNX1-213ENST00000469087 FOXD4L5Q5VV16 416 aaPredicted RBP14.91□□□□□ -0.02
RUNX1-213ENST00000469087 MAP1SQ66K74 1059 aaPredicted RBP14.91□□□□□ -0.02
RUNX1-213ENST00000469087 FOXD4L4Q8WXT5 416 aaPredicted RBP14.91□□□□□ -0.02
RUNX1-213ENST00000469087 CDCA5Q96FF9 252 aa14.91□□□□□ -0.02
RUNX1-213ENST00000469087 AIFM3Q96NN9 605 aa14.91□□□□□ -0.02
RUNX1-213ENST00000469087 NMRK2Q9NPI5 230 aa14.91□□□□□ -0.02
RUNX1-213ENST00000469087 TMX2Q9Y320 296 aa14.91□□□□□ -0.02
RUNX1-213ENST00000469087 V9GY48 417 aaPredicted RBP14.91□□□□□ -0.02
RUNX1-213ENST00000469087 BAZ2BQ9UIF8 2168 aaKnown RBP14.91□□□□□ -0.02
RUNX1-213ENST00000469087 hCG_1642624A0A1W2PR95 340 aa14.9□□□□□ -0.02
RUNX1-213ENST00000469087 PRPF3O43395 683 aaKnown RBP14.9□□□□□ -0.02
RUNX1-213ENST00000469087 PDCP20941 246 aa14.9□□□□□ -0.02
RUNX1-213ENST00000469087 GNAQP50148 359 aa14.9□□□□□ -0.02
RUNX1-213ENST00000469087 ZNF526Q8TF50 670 aaPredicted RBP14.9□□□□□ -0.02
RUNX1-213ENST00000469087 RNF26Q9BY78 433 aaPredicted RBP14.9□□□□□ -0.02
RUNX1-213ENST00000469087 CPVLQ9H3G5 476 aa14.9□□□□□ -0.02
RUNX1-213ENST00000469087 GJB4Q9NTQ9 266 aa14.9□□□□□ -0.02
RUNX1-213ENST00000469087 MTMR6Q9Y217 621 aa14.9□□□□□ -0.02
RUNX1-213ENST00000469087 CYTH3O43739 400 aa14.9□□□□□ -0.02
RUNX1-213ENST00000469087 RAD21O60216 631 aa14.9□□□□□ -0.02
RUNX1-213ENST00000469087 FOSBP53539 338 aa14.9□□□□□ -0.02
RUNX1-213ENST00000469087 ZNF543Q08ER8 600 aa14.9□□□□□ -0.02
RUNX1-213ENST00000469087 PKN1Q16512 942 aa14.9□□□□□ -0.02
RUNX1-213ENST00000469087 SLFN13Q68D06 897 aa14.9□□□□□ -0.02
RUNX1-213ENST00000469087 TRIM22Q8IYM9 498 aa14.9□□□□□ -0.02
RUNX1-213ENST00000469087 SCYL3Q8IZE3 742 aa14.9□□□□□ -0.02
RUNX1-213ENST00000469087 GMCL1P1Q8NEA9 526 aa14.9□□□□□ -0.02
RUNX1-213ENST00000469087 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.9□□□□□ -0.02
RUNX1-213ENST00000469087 TNPO1Q92973 898 aaKnown RBP14.9□□□□□ -0.02
RUNX1-213ENST00000469087 UBA5Q9GZZ9 404 aa14.9□□□□□ -0.02
RUNX1-213ENST00000469087 ARHGEF10LQ9HCE6 1279 aa14.9□□□□□ -0.02
RUNX1-213ENST00000469087 GINM1Q9NU53 330 aa14.9□□□□□ -0.02
RUNX1-213ENST00000469087 FRMPD2Q68DX3 1309 aaPredicted RBP14.9□□□□□ -0.02
RUNX1-213ENST00000469087 STK36Q9NRP7 1315 aa14.9□□□□□ -0.02
RUNX1-213ENST00000469087 VPS37CA5D8V6 355 aaPredicted RBP14.89□□□□□ -0.03
RUNX1-213ENST00000469087 PPP1R12BO60237 982 aaPredicted RBP14.89□□□□□ -0.03
RUNX1-213ENST00000469087 KIAA1755Q5JYT7 1200 aa14.89□□□□□ -0.03
RUNX1-213ENST00000469087 ALG1Q9BT22 464 aa14.89□□□□□ -0.03
RUNX1-213ENST00000469087 GPCPD1Q9NPB8 672 aa14.89□□□□□ -0.03
RUNX1-213ENST00000469087 SYNPO2Q9UMS6 1093 aa14.89□□□□□ -0.03
RUNX1-213ENST00000469087 KIF3AQ9Y496 699 aa14.89□□□□□ -0.03
RUNX1-213ENST00000469087 CNTNAP5Q8WYK1 1306 aa14.89□□□□□ -0.03
RUNX1-213ENST00000469087 DEXIO95424 95 aa14.88□□□□□ -0.03
RUNX1-213ENST00000469087 NDUFB10O96000 172 aa14.88□□□□□ -0.03
RUNX1-213ENST00000469087 ZSCAN22P10073 491 aaPredicted RBP14.88□□□□□ -0.03
RUNX1-213ENST00000469087 PDIA4P13667 645 aaKnown RBP14.88□□□□□ -0.03
RUNX1-213ENST00000469087 PTPRAP18433 802 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms