RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 PAGR1Q9BTK6 254 aa20.44■□□□□ 0.86
SSBP1-207ENST00000468267 SH2D4AQ9H788 454 aa20.44■□□□□ 0.86
SSBP1-207ENST00000468267 KANSL2Q9H9L4 492 aa20.44■□□□□ 0.86
SSBP1-207ENST00000468267 TMX2Q9Y320 296 aa20.44■□□□□ 0.86
SSBP1-207ENST00000468267 CNMDO75829 334 aa20.43■□□□□ 0.86
SSBP1-207ENST00000468267 ELNP15502 786 aa20.43■□□□□ 0.86
SSBP1-207ENST00000468267 RASA1P20936 1047 aa20.43■□□□□ 0.86
SSBP1-207ENST00000468267 UBXN2AP68543 259 aa20.43■□□□□ 0.86
SSBP1-207ENST00000468267 KIAA1755Q5JYT7 1200 aa20.43■□□□□ 0.86
SSBP1-207ENST00000468267 TICAM2Q86XR7 235 aa20.43■□□□□ 0.86
SSBP1-207ENST00000468267 NACAP1Q9BZK3 213 aa20.43■□□□□ 0.86
SSBP1-207ENST00000468267 MKNK2Q9HBH9 465 aa20.43■□□□□ 0.86
SSBP1-207ENST00000468267 RLFQ13129 1914 aa20.43■□□□□ 0.86
SSBP1-207ENST00000468267 GREB1LQ9C091 1923 aaPredicted RBP20.43■□□□□ 0.86
SSBP1-207ENST00000468267 CCL5P13501 91 aa20.42■□□□□ 0.86
SSBP1-207ENST00000468267 EEF2P13639 858 aaKnown RBP20.42■□□□□ 0.86
SSBP1-207ENST00000468267 MAPK4P31152 587 aa20.42■□□□□ 0.86
SSBP1-207ENST00000468267 STK11IPQ8N1F8 1099 aa20.42■□□□□ 0.86
SSBP1-207ENST00000468267 LPAR1Q92633 364 aa20.42■□□□□ 0.86
SSBP1-207ENST00000468267 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.42■□□□□ 0.86
SSBP1-207ENST00000468267 VCPKMTQ9H867 229 aa20.42■□□□□ 0.86
SSBP1-207ENST00000468267 SPDYE16A6NNV3 312 aaPredicted RBP20.41■□□□□ 0.86
SSBP1-207ENST00000468267 COG2Q14746 738 aa20.41■□□□□ 0.86
SSBP1-207ENST00000468267 PORCNQ9H237 461 aa20.41■□□□□ 0.86
SSBP1-207ENST00000468267 HOXC10Q9NYD6 342 aa20.41■□□□□ 0.86
SSBP1-207ENST00000468267 INHAP05111 366 aa20.4■□□□□ 0.86
SSBP1-207ENST00000468267 CCNA1P78396 465 aa20.4■□□□□ 0.86
SSBP1-207ENST00000468267 ATP2B2Q01814 1243 aa20.4■□□□□ 0.86
SSBP1-207ENST00000468267 CCDC129Q6ZRS4 1044 aa20.4■□□□□ 0.86
SSBP1-207ENST00000468267 PLEKHM2Q8IWE5 1019 aa20.4■□□□□ 0.86
SSBP1-207ENST00000468267 CCAR1Q8IX12 1150 aaKnown RBP20.4■□□□□ 0.86
SSBP1-207ENST00000468267 TANGO6Q9C0B7 1094 aa20.4■□□□□ 0.86
SSBP1-207ENST00000468267 RNF208Q9H0X6 261 aa20.4■□□□□ 0.86
SSBP1-207ENST00000468267 NAPBQ9H115 298 aa20.4■□□□□ 0.86
SSBP1-207ENST00000468267 OSBPL3Q9H4L5 887 aa20.4■□□□□ 0.86
SSBP1-207ENST00000468267 ZNF287Q9HBT7 754 aa20.4■□□□□ 0.86
SSBP1-207ENST00000468267 HELLSQ9NRZ9 838 aa20.4■□□□□ 0.86
SSBP1-207ENST00000468267 BTBD7Q9P203 1132 aa20.4■□□□□ 0.86
SSBP1-207ENST00000468267 FOXP2O15409 715 aa20.39■□□□□ 0.85
SSBP1-207ENST00000468267 GJB1P08034 283 aa20.39■□□□□ 0.85
SSBP1-207ENST00000468267 PLEKHH3Q7Z736 793 aa20.39■□□□□ 0.85
SSBP1-207ENST00000468267 SPICE1Q8N0Z3 855 aa20.39■□□□□ 0.85
SSBP1-207ENST00000468267 NUDT12Q9BQG2 462 aa20.39■□□□□ 0.85
SSBP1-207ENST00000468267 UNC93B1Q9H1C4 597 aa20.39■□□□□ 0.85
SSBP1-207ENST00000468267 CEP290O15078 2479 aa20.39■□□□□ 0.85
SSBP1-207ENST00000468267 TRIM6-TRIM34B2RNG4 842 aa20.38■□□□□ 0.85
SSBP1-207ENST00000468267 WDR46O15213 610 aaKnown RBP20.38■□□□□ 0.85
SSBP1-207ENST00000468267 GPR142Q7Z601 462 aa20.38■□□□□ 0.85
SSBP1-207ENST00000468267 ZNF444Q8N0Y2 327 aaPredicted RBP20.38■□□□□ 0.85
SSBP1-207ENST00000468267 NKX2-3Q8TAU0 364 aa20.38■□□□□ 0.85
SSBP1-207ENST00000468267 SOCS4Q8WXH5 440 aa20.38■□□□□ 0.85
SSBP1-207ENST00000468267 USP6NLQ92738 828 aa20.38■□□□□ 0.85
SSBP1-207ENST00000468267 GOPCQ9HD26 462 aa20.38■□□□□ 0.85
SSBP1-207ENST00000468267 PARP14Q460N5 1801 aa20.38■□□□□ 0.85
SSBP1-207ENST00000468267 MYH4Q9Y623 1939 aa20.37■□□□□ 0.85
SSBP1-207ENST00000468267 PRDM1O75626 825 aa20.37■□□□□ 0.85
SSBP1-207ENST00000468267 HMGCRP04035 888 aa20.37■□□□□ 0.85
SSBP1-207ENST00000468267 SLC3A2P08195 630 aaKnown RBP20.37■□□□□ 0.85
SSBP1-207ENST00000468267 XRCC5P13010 732 aaKnown RBP20.37■□□□□ 0.85
SSBP1-207ENST00000468267 DSG3P32926 999 aa20.37■□□□□ 0.85
SSBP1-207ENST00000468267 GJA8P48165 433 aa20.37■□□□□ 0.85
SSBP1-207ENST00000468267 PPARAQ07869 468 aa20.37■□□□□ 0.85
SSBP1-207ENST00000468267 MORN1Q5T089 497 aa20.37■□□□□ 0.85
SSBP1-207ENST00000468267 FAM227BQ96M60 508 aa20.37■□□□□ 0.85
SSBP1-207ENST00000468267 NYAP2Q9P242 653 aa20.37■□□□□ 0.85
SSBP1-207ENST00000468267 IGKV6D-41A0A0C4DH26 115 aa20.36■□□□□ 0.85
SSBP1-207ENST00000468267 A0A0D9SFI3 127 aa20.36■□□□□ 0.85
SSBP1-207ENST00000468267 FLOT1O75955 427 aa20.36■□□□□ 0.85
SSBP1-207ENST00000468267 CYP2B6P20813 491 aa20.36■□□□□ 0.85
SSBP1-207ENST00000468267 IRX6P78412 446 aaPredicted RBP20.36■□□□□ 0.85
SSBP1-207ENST00000468267 PDE4BQ07343 736 aa20.36■□□□□ 0.85
SSBP1-207ENST00000468267 ALX1Q15699 326 aa20.36■□□□□ 0.85
SSBP1-207ENST00000468267 MCMDC2Q4G0Z9 681 aa20.36■□□□□ 0.85
SSBP1-207ENST00000468267 VPS53Q5VIR6 699 aa20.36■□□□□ 0.85
SSBP1-207ENST00000468267 MB21D1Q8N884 522 aa20.36■□□□□ 0.85
SSBP1-207ENST00000468267 RILPL2Q969X0 211 aa20.36■□□□□ 0.85
SSBP1-207ENST00000468267 SHISA4Q96DD7 197 aa20.36■□□□□ 0.85
SSBP1-207ENST00000468267 CWC22Q9HCG8 908 aaKnown RBP20.36■□□□□ 0.85
SSBP1-207ENST00000468267 A0A0G2JMZ2 1700 aa20.35■□□□□ 0.85
SSBP1-207ENST00000468267 SGPL1O95470 568 aa20.34■□□□□ 0.85
SSBP1-207ENST00000468267 RGS2P41220 211 aa20.34■□□□□ 0.85
SSBP1-207ENST00000468267 NMIQ13287 307 aaPredicted RBP20.34■□□□□ 0.85
SSBP1-207ENST00000468267 TRMT44Q8IYL2 757 aaKnown RBP20.34■□□□□ 0.85
SSBP1-207ENST00000468267 U2AF1L4Q8WU68 220 aaKnown RBP20.34■□□□□ 0.85
SSBP1-207ENST00000468267 TRIB2Q92519 343 aa20.34■□□□□ 0.85
SSBP1-207ENST00000468267 PAK6Q9NQU5 681 aaPredicted RBP20.34■□□□□ 0.85
SSBP1-207ENST00000468267 MTMR4Q9NYA4 1195 aa20.34■□□□□ 0.85
SSBP1-207ENST00000468267 CLIP2Q9UDT6 1046 aa20.34■□□□□ 0.85
SSBP1-207ENST00000468267 COL11A1P12107 1806 aaPredicted RBP20.33■□□□□ 0.85
SSBP1-207ENST00000468267 SLC15A5A6NIM6 579 aa20.33■□□□□ 0.85
SSBP1-207ENST00000468267 PTPREP23469 700 aa20.33■□□□□ 0.85
SSBP1-207ENST00000468267 TRIM32Q13049 653 aa20.33■□□□□ 0.85
SSBP1-207ENST00000468267 WDR78Q5VTH9 848 aa20.33■□□□□ 0.85
SSBP1-207ENST00000468267 NEDD1Q8NHV4 660 aa20.33■□□□□ 0.85
SSBP1-207ENST00000468267 MKL1Q969V6 931 aa20.33■□□□□ 0.85
SSBP1-207ENST00000468267 ATG4CQ96DT6 458 aa20.33■□□□□ 0.85
SSBP1-207ENST00000468267 CEP95Q96GE4 821 aa20.33■□□□□ 0.85
SSBP1-207ENST00000468267 MOV10L1Q9BXT6 1211 aaKnown RBP20.33■□□□□ 0.85
SSBP1-207ENST00000468267 SPATC1LQ9H0A9 340 aa20.33■□□□□ 0.85
SSBP1-207ENST00000468267 ANAPC4Q9UJX5 808 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms