RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 LBX2Q6XYB7 198 aa12.45□□□□□ -0.42
SSR3-205ENST00000467789 SH2D4AQ9H788 454 aa12.45□□□□□ -0.42
SSR3-205ENST00000467789 ARPP21Q9UBL0 812 aaPredicted RBP12.45□□□□□ -0.42
SSR3-205ENST00000467789 PCDHB15Q9Y5E8 787 aa12.45□□□□□ -0.42
SSR3-205ENST00000467789 GTPBP6O43824 516 aaPredicted RBP12.44□□□□□ -0.42
SSR3-205ENST00000467789 GLRX3O76003 335 aaKnown RBP12.44□□□□□ -0.42
SSR3-205ENST00000467789 CCL5P13501 91 aa12.44□□□□□ -0.42
SSR3-205ENST00000467789 GNAT2P19087 354 aa12.44□□□□□ -0.42
SSR3-205ENST00000467789 CCNA1P78396 465 aa12.44□□□□□ -0.42
SSR3-205ENST00000467789 SEPT2Q15019 361 aa12.44□□□□□ -0.42
SSR3-205ENST00000467789 MTFR1Q15390 333 aa12.44□□□□□ -0.42
SSR3-205ENST00000467789 CATSPERGQ6ZRH7 1159 aa12.44□□□□□ -0.42
SSR3-205ENST00000467789 TRMT44Q8IYL2 757 aaKnown RBP12.44□□□□□ -0.42
SSR3-205ENST00000467789 SOCS4Q8WXH5 440 aa12.44□□□□□ -0.42
SSR3-205ENST00000467789 APPBP2Q92624 585 aa12.44□□□□□ -0.42
SSR3-205ENST00000467789 PUS7LQ9H0K6 701 aaKnown RBP12.44□□□□□ -0.42
SSR3-205ENST00000467789 RNF208Q9H0X6 261 aa12.44□□□□□ -0.42
SSR3-205ENST00000467789 RBPJLQ9UBG7 517 aa12.44□□□□□ -0.42
SSR3-205ENST00000467789 RABGAP1Q9Y3P9 1069 aa12.44□□□□□ -0.42
SSR3-205ENST00000467789 SLC4A4Q9Y6R1 1079 aa12.44□□□□□ -0.42
SSR3-205ENST00000467789 USP17L12C9JPN9 530 aa12.43□□□□□ -0.42
SSR3-205ENST00000467789 USP17L21D6R901 530 aa12.43□□□□□ -0.42
SSR3-205ENST00000467789 MPHOSPH10O00566 681 aaKnown RBP12.43□□□□□ -0.42
SSR3-205ENST00000467789 PRKAB2O43741 272 aa12.43□□□□□ -0.42
SSR3-205ENST00000467789 MYCP01106 439 aaPredicted RBP12.43□□□□□ -0.42
SSR3-205ENST00000467789 XRCC5P13010 732 aaKnown RBP12.43□□□□□ -0.42
SSR3-205ENST00000467789 VCAM1P19320 739 aa12.43□□□□□ -0.42
SSR3-205ENST00000467789 GUCY1A2P33402 732 aa12.43□□□□□ -0.42
SSR3-205ENST00000467789 ERVK-9P63128 1117 aa12.43□□□□□ -0.42
SSR3-205ENST00000467789 ERVK-24P63145 666 aa12.43□□□□□ -0.42
SSR3-205ENST00000467789 SBK1Q52WX2 424 aa12.43□□□□□ -0.42
SSR3-205ENST00000467789 C16orf86Q6ZW13 317 aa12.43□□□□□ -0.42
SSR3-205ENST00000467789 CCAR1Q8IX12 1150 aaKnown RBP12.43□□□□□ -0.42
SSR3-205ENST00000467789 LPAR1Q92633 364 aa12.43□□□□□ -0.42
SSR3-205ENST00000467789 GCC1Q96CN9 775 aa12.43□□□□□ -0.42
SSR3-205ENST00000467789 STRBPQ96SI9 672 aaKnown RBP12.43□□□□□ -0.42
SSR3-205ENST00000467789 ARHGEF10LQ9HCE6 1279 aa12.43□□□□□ -0.42
SSR3-205ENST00000467789 GJD2Q9UKL4 321 aa12.43□□□□□ -0.42
SSR3-205ENST00000467789 RNF113AO15541 343 aaKnown RBP12.42□□□□□ -0.42
SSR3-205ENST00000467789 HMGCRP04035 888 aa12.42□□□□□ -0.42
SSR3-205ENST00000467789 INHAP05111 366 aa12.42□□□□□ -0.42
SSR3-205ENST00000467789 ELNP15502 786 aa12.42□□□□□ -0.42
SSR3-205ENST00000467789 CDK8P49336 464 aa12.42□□□□□ -0.42
SSR3-205ENST00000467789 HDAC1Q13547 482 aaPredicted RBP12.42□□□□□ -0.42
SSR3-205ENST00000467789 ZYXQ15942 572 aaKnown RBP12.42□□□□□ -0.42
SSR3-205ENST00000467789 CTR9Q6PD62 1173 aa12.42□□□□□ -0.42
SSR3-205ENST00000467789 PDCD7Q8N8D1 485 aaKnown RBP12.42□□□□□ -0.42
SSR3-205ENST00000467789 ACER1Q8TDN7 264 aa12.42□□□□□ -0.42
SSR3-205ENST00000467789 NUDT12Q9BQG2 462 aa12.42□□□□□ -0.42
SSR3-205ENST00000467789 TXNRD2Q9NNW7 524 aa12.42□□□□□ -0.42
SSR3-205ENST00000467789 HOXC10Q9NYD6 342 aa12.42□□□□□ -0.42
SSR3-205ENST00000467789 PLXNB2O15031 1838 aa12.41□□□□□ -0.42
SSR3-205ENST00000467789 SGPL1O95470 568 aa12.41□□□□□ -0.42
SSR3-205ENST00000467789 CYP2D6P10635 497 aa12.41□□□□□ -0.42
SSR3-205ENST00000467789 MX1P20591 662 aa12.41□□□□□ -0.42
SSR3-205ENST00000467789 PLCB2Q00722 1185 aa12.41□□□□□ -0.42
SSR3-205ENST00000467789 COG2Q14746 738 aa12.41□□□□□ -0.42
SSR3-205ENST00000467789 SLFNL1Q499Z3 407 aa12.41□□□□□ -0.42
SSR3-205ENST00000467789 TICAM2Q86XR7 235 aa12.41□□□□□ -0.42
SSR3-205ENST00000467789 PI4K2BQ8TCG2 481 aa12.41□□□□□ -0.42
SSR3-205ENST00000467789 U2AF1L4Q8WU68 220 aaKnown RBP12.41□□□□□ -0.42
SSR3-205ENST00000467789 DYNLL2Q96FJ2 89 aa12.41□□□□□ -0.42
SSR3-205ENST00000467789 PAGR1Q9BTK6 254 aa12.41□□□□□ -0.42
SSR3-205ENST00000467789 UNC93B1Q9H1C4 597 aa12.41□□□□□ -0.42
SSR3-205ENST00000467789 RPAP3Q9H6T3 665 aaPredicted RBP12.41□□□□□ -0.42
SSR3-205ENST00000467789 KANSL2Q9H9L4 492 aa12.41□□□□□ -0.42
SSR3-205ENST00000467789 ZNF287Q9HBT7 754 aa12.41□□□□□ -0.42
SSR3-205ENST00000467789 PAK6Q9NQU5 681 aaPredicted RBP12.41□□□□□ -0.42
SSR3-205ENST00000467789 TMX2Q9Y320 296 aa12.41□□□□□ -0.42
SSR3-205ENST00000467789 A0A1W2PRG0 241 aa12.4□□□□□ -0.42
SSR3-205ENST00000467789 GSG1L2A8MUP6 293 aa12.4□□□□□ -0.42
SSR3-205ENST00000467789 RGS2P41220 211 aa12.4□□□□□ -0.42
SSR3-205ENST00000467789 ICA1Q05084 483 aa12.4□□□□□ -0.42
SSR3-205ENST00000467789 GPR142Q7Z601 462 aa12.4□□□□□ -0.42
SSR3-205ENST00000467789 PLEKHH3Q7Z736 793 aa12.4□□□□□ -0.42
SSR3-205ENST00000467789 MB21D1Q8N884 522 aa12.4□□□□□ -0.42
SSR3-205ENST00000467789 SLC44A5Q8NCS7 719 aa12.4□□□□□ -0.42
SSR3-205ENST00000467789 OSBP2Q969R2 916 aa12.4□□□□□ -0.42
SSR3-205ENST00000467789 SHISA4Q96DD7 197 aa12.4□□□□□ -0.42
SSR3-205ENST00000467789 CRBNQ96SW2 442 aa12.4□□□□□ -0.42
SSR3-205ENST00000467789 HTATIP2Q9BUP3 242 aa12.4□□□□□ -0.42
SSR3-205ENST00000467789 CWC22Q9HCG8 908 aaKnown RBP12.4□□□□□ -0.42
SSR3-205ENST00000467789 ROBO3Q96MS0 1386 aa12.4□□□□□ -0.42
SSR3-205ENST00000467789 RPTORQ8N122 1335 aa12.39□□□□□ -0.43
SSR3-205ENST00000467789 SPDYE16A6NNV3 312 aaPredicted RBP12.39□□□□□ -0.43
SSR3-205ENST00000467789 WDR46O15213 610 aaKnown RBP12.39□□□□□ -0.43
SSR3-205ENST00000467789 GPAA1O43292 621 aa12.39□□□□□ -0.43
SSR3-205ENST00000467789 CHGBP05060 677 aa12.39□□□□□ -0.43
SSR3-205ENST00000467789 AKR1B1P15121 316 aa12.39□□□□□ -0.43
SSR3-205ENST00000467789 Q3C1V9 767 aa12.39□□□□□ -0.43
SSR3-205ENST00000467789 TSHZ3Q63HK5 1081 aa12.39□□□□□ -0.43
SSR3-205ENST00000467789 UBE2Q1Q7Z7E8 422 aa12.39□□□□□ -0.43
SSR3-205ENST00000467789 USP6NLQ92738 828 aa12.39□□□□□ -0.43
SSR3-205ENST00000467789 NACAP1Q9BZK3 213 aa12.39□□□□□ -0.43
SSR3-205ENST00000467789 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.39□□□□□ -0.43
SSR3-205ENST00000467789 PORCNQ9H237 461 aa12.39□□□□□ -0.43
SSR3-205ENST00000467789 VCPKMTQ9H867 229 aa12.39□□□□□ -0.43
SSR3-205ENST00000467789 HMX1Q9NP08 348 aaPredicted RBP12.39□□□□□ -0.43
SSR3-205ENST00000467789 IVNS1ABPQ9Y6Y0 642 aa12.39□□□□□ -0.43
SSR3-205ENST00000467789 SALL3Q9BXA9 1300 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms