RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 POLRMTO00411 1230 aaKnown RBP16.8■□□□□ 0.28
PRPF38B-204ENST00000467302 ACTN4O43707 911 aaKnown RBP16.8■□□□□ 0.28
PRPF38B-204ENST00000467302 STX10O60499 249 aa16.8■□□□□ 0.28
PRPF38B-204ENST00000467302 WTAPQ15007 396 aa16.8■□□□□ 0.28
PRPF38B-204ENST00000467302 SART3Q15020 963 aaKnown RBP16.8■□□□□ 0.28
PRPF38B-204ENST00000467302 SPECC1LQ69YQ0 1117 aa16.8■□□□□ 0.28
PRPF38B-204ENST00000467302 ZNF771Q7L3S4 317 aaPredicted RBP16.8■□□□□ 0.28
PRPF38B-204ENST00000467302 DACH1Q9UI36 760 aa16.8■□□□□ 0.28
PRPF38B-204ENST00000467302 RGPD3A6NKT7 1758 aaPredicted RBP16.8■□□□□ 0.28
PRPF38B-204ENST00000467302 LAMB1P07942 1786 aa16.8■□□□□ 0.28
PRPF38B-204ENST00000467302 RGPD4Q7Z3J3 1758 aa16.8■□□□□ 0.28
PRPF38B-204ENST00000467302 NRXN2Q9P2S2 1712 aa16.8■□□□□ 0.28
PRPF38B-204ENST00000467302 ZRANB2O95218 330 aaKnown RBP eCLIP16.8■□□□□ 0.281e-10■■■■□ 21
PRPF38B-204ENST00000467302 NR5A1Q13285 461 aa16.8■□□□□ 0.28
PRPF38B-204ENST00000467302 SPTY2D1Q68D10 685 aaPredicted RBP16.8■□□□□ 0.28
PRPF38B-204ENST00000467302 TMTC2Q8N394 836 aa16.8■□□□□ 0.28
PRPF38B-204ENST00000467302 UBXN4Q92575 508 aa16.8■□□□□ 0.28
PRPF38B-204ENST00000467302 SMARCE1Q969G3 411 aa16.8■□□□□ 0.28
PRPF38B-204ENST00000467302 BRIP1Q9BX63 1249 aa16.8■□□□□ 0.28
PRPF38B-204ENST00000467302 CCDC196A0A1B0GTZ2 297 aa16.79■□□□□ 0.28
PRPF38B-204ENST00000467302 GOLGA6L9A6NEM1 432 aa16.79■□□□□ 0.28
PRPF38B-204ENST00000467302 EFCAB8A8MWE9 144 aa16.79■□□□□ 0.28
PRPF38B-204ENST00000467302 URI1O94763 535 aaPredicted RBP16.79■□□□□ 0.28
PRPF38B-204ENST00000467302 HOXA10P31260 410 aaPredicted RBP16.79■□□□□ 0.28
PRPF38B-204ENST00000467302 HSP90AA4PQ58FG1 418 aa16.79■□□□□ 0.28
PRPF38B-204ENST00000467302 KANK3Q6NY19 840 aa16.79■□□□□ 0.28
PRPF38B-204ENST00000467302 ZNF804AQ7Z570 1209 aa16.79■□□□□ 0.28
PRPF38B-204ENST00000467302 ZKSCAN3Q9BRR0 538 aa16.79■□□□□ 0.28
PRPF38B-204ENST00000467302 ERICH2A1L162 156 aa16.79■□□□□ 0.28
PRPF38B-204ENST00000467302 ZNF827Q17R98 1081 aa16.79■□□□□ 0.28
PRPF38B-204ENST00000467302 GRAMD1CQ8IYS0 662 aa16.79■□□□□ 0.28
PRPF38B-204ENST00000467302 FANCBQ8NB91 859 aa16.79■□□□□ 0.28
PRPF38B-204ENST00000467302 OXER1Q8TDS5 423 aa16.79■□□□□ 0.28
PRPF38B-204ENST00000467302 TNS1Q9HBL0 1735 aaKnown RBP16.78■□□□□ 0.28
PRPF38B-204ENST00000467302 BBOX1O75936 387 aa16.78■□□□□ 0.28
PRPF38B-204ENST00000467302 PNMA6AP0CW24 399 aaPredicted RBP16.78■□□□□ 0.28
PRPF38B-204ENST00000467302 ATP2B4P23634 1241 aa16.78■□□□□ 0.28
PRPF38B-204ENST00000467302 ERCC5P28715 1186 aaPredicted RBP16.78■□□□□ 0.28
PRPF38B-204ENST00000467302 PRDX5P30044 214 aa16.78■□□□□ 0.28
PRPF38B-204ENST00000467302 NR1I3Q14994 352 aa16.78■□□□□ 0.28
PRPF38B-204ENST00000467302 USP49Q70CQ1 688 aa16.78■□□□□ 0.28
PRPF38B-204ENST00000467302 CMTR1Q8N1G2 835 aaKnown RBP16.78■□□□□ 0.28
PRPF38B-204ENST00000467302 MNS1Q8NEH6 495 aa16.78■□□□□ 0.28
PRPF38B-204ENST00000467302 WDR66Q8TBY9 1149 aa16.78■□□□□ 0.28
PRPF38B-204ENST00000467302 AKT1S1Q96B36 256 aa16.78■□□□□ 0.28
PRPF38B-204ENST00000467302 CARD6Q9BX69 1037 aa16.78■□□□□ 0.28
PRPF38B-204ENST00000467302 ST7Q9NRC1 585 aa16.78■□□□□ 0.28
PRPF38B-204ENST00000467302 CEP131Q9UPN4 1083 aa16.78■□□□□ 0.28
PRPF38B-204ENST00000467302 ANKRD31Q8N7Z5 1873 aa16.78■□□□□ 0.28
PRPF38B-204ENST00000467302 BAZ2AQ9UIF9 1905 aaKnown RBP16.78■□□□□ 0.28
PRPF38B-204ENST00000467302 KLRG2A4D1S0 409 aaPredicted RBP16.77■□□□□ 0.28
PRPF38B-204ENST00000467302 PLCD1P51178 756 aa16.77■□□□□ 0.28
PRPF38B-204ENST00000467302 ADKP55263 362 aaKnown RBP16.77■□□□□ 0.28
PRPF38B-204ENST00000467302 FAM193AP78312 1265 aa16.77■□□□□ 0.28
PRPF38B-204ENST00000467302 MAP3K9P80192 1104 aa16.77■□□□□ 0.28
PRPF38B-204ENST00000467302 TOGARAM2Q6ZUX3 1019 aa16.77■□□□□ 0.28
PRPF38B-204ENST00000467302 TRMT44Q8IYL2 757 aaKnown RBP16.77■□□□□ 0.28
PRPF38B-204ENST00000467302 ZNF654Q8IZM8 581 aa16.77■□□□□ 0.28
PRPF38B-204ENST00000467302 CCDC82Q8N4S0 544 aa16.77■□□□□ 0.28
PRPF38B-204ENST00000467302 ESR2Q92731 530 aa16.77■□□□□ 0.28
PRPF38B-204ENST00000467302 SHISA4Q96DD7 197 aa16.77■□□□□ 0.28
PRPF38B-204ENST00000467302 CRAMP1Q96RY5 1269 aa16.77■□□□□ 0.28
PRPF38B-204ENST00000467302 WDR24Q96S15 920 aa16.77■□□□□ 0.28
PRPF38B-204ENST00000467302 CRNKL1Q9BZJ0 848 aaKnown RBP16.77■□□□□ 0.28
PRPF38B-204ENST00000467302 CSRNP2Q9H175 543 aa16.77■□□□□ 0.28
PRPF38B-204ENST00000467302 LTBP1Q14766 1721 aa16.77■□□□□ 0.27
PRPF38B-204ENST00000467302 A0A1B0GTH6 734 aa16.77■□□□□ 0.27
PRPF38B-204ENST00000467302 APBA3O96018 575 aa16.77■□□□□ 0.27
PRPF38B-204ENST00000467302 TPM1P09493 284 aa16.77■□□□□ 0.27
PRPF38B-204ENST00000467302 PCP11498 1178 aaKnown RBP16.77■□□□□ 0.27
PRPF38B-204ENST00000467302 CDK11BP21127 795 aaKnown RBP16.77■□□□□ 0.27
PRPF38B-204ENST00000467302 GPSM2P81274 684 aa16.77■□□□□ 0.27
PRPF38B-204ENST00000467302 TMC4Q7Z404 712 aa16.77■□□□□ 0.27
PRPF38B-204ENST00000467302 SAMSN1Q9NSI8 373 aaKnown RBP16.77■□□□□ 0.27
PRPF38B-204ENST00000467302 AATFQ9NY61 560 aaKnown RBP eCLIP16.77■□□□□ 0.27
PRPF38B-204ENST00000467302 JAG2Q9Y219 1238 aa16.77■□□□□ 0.27
PRPF38B-204ENST00000467302 SEC23AQ15436 765 aa16.76■□□□□ 0.27
PRPF38B-204ENST00000467302 CT47A1Q5JQC4 288 aaPredicted RBP16.76■□□□□ 0.27
PRPF38B-204ENST00000467302 APTXQ7Z2E3 356 aaKnown RBP16.76■□□□□ 0.27
PRPF38B-204ENST00000467302 SLC51AQ86UW1 340 aa16.76■□□□□ 0.27
PRPF38B-204ENST00000467302 DZIP1Q86YF9 867 aaKnown RBP16.76■□□□□ 0.27
PRPF38B-204ENST00000467302 NLGN1Q8N2Q7 840 aa16.76■□□□□ 0.27
PRPF38B-204ENST00000467302 PDILTQ8N807 584 aa16.76■□□□□ 0.27
PRPF38B-204ENST00000467302 FLAD1Q8NFF5 587 aa16.76■□□□□ 0.27
PRPF38B-204ENST00000467302 KIFC2Q96AC6 838 aa16.76■□□□□ 0.27
PRPF38B-204ENST00000467302 UBAC1Q9BSL1 405 aa16.76■□□□□ 0.27
PRPF38B-204ENST00000467302 CABP5Q9NP86 173 aa16.76■□□□□ 0.27
PRPF38B-204ENST00000467302 ARGLU1Q9NWB6 273 aaPredicted RBP16.76■□□□□ 0.27
PRPF38B-204ENST00000467302 UFL1O94874 794 aa16.75■□□□□ 0.27
PRPF38B-204ENST00000467302 CASQ1P31415 396 aa16.75■□□□□ 0.27
PRPF38B-204ENST00000467302 PLA2G4AP47712 749 aa16.75■□□□□ 0.27
PRPF38B-204ENST00000467302 CTR9Q6PD62 1173 aa16.75■□□□□ 0.27
PRPF38B-204ENST00000467302 RNF26Q9BY78 433 aaPredicted RBP16.75■□□□□ 0.27
PRPF38B-204ENST00000467302 GGA1Q9UJY5 639 aa16.75■□□□□ 0.27
PRPF38B-204ENST00000467302 USP17L12C9JPN9 530 aa16.75■□□□□ 0.27
PRPF38B-204ENST00000467302 USP17L21D6R901 530 aa16.75■□□□□ 0.27
PRPF38B-204ENST00000467302 GNG11P61952 73 aa16.75■□□□□ 0.27
PRPF38B-204ENST00000467302 PPP2R5BQ15173 497 aa16.75■□□□□ 0.27
PRPF38B-204ENST00000467302 TMCO3Q6UWJ1 677 aa16.75■□□□□ 0.27
PRPF38B-204ENST00000467302 SH3RF1Q7Z6J0 888 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms