RNA–Protein interactions for RNA: ENST00000466829.5

COL16A1-207, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 254 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-207ENST00000466829 SAMD1Q6SPF0 538 aaPredicted RBP19.08■□□□□ 0.64
COL16A1-207ENST00000466829 CLEC10AQ8IUN9 316 aa19.08■□□□□ 0.64
COL16A1-207ENST00000466829 RABGAP1Q9Y3P9 1069 aa19.08■□□□□ 0.64
COL16A1-207ENST00000466829 Q3C1V9 767 aa19.07■□□□□ 0.64
COL16A1-207ENST00000466829 SBK1Q52WX2 424 aa19.07■□□□□ 0.64
COL16A1-207ENST00000466829 SPICE1Q8N0Z3 855 aa19.07■□□□□ 0.64
COL16A1-207ENST00000466829 NUDT12Q9BQG2 462 aa19.07■□□□□ 0.64
COL16A1-207ENST00000466829 UNC93B1Q9H1C4 597 aa19.07■□□□□ 0.64
COL16A1-207ENST00000466829 KIAA0100Q14667 2235 aaKnown RBP19.06■□□□□ 0.64
COL16A1-207ENST00000466829 DDX60LQ5H9U9 1706 aaKnown RBP19.06■□□□□ 0.64
COL16A1-207ENST00000466829 PATL2C9JE40 543 aaKnown RBP19.06■□□□□ 0.64
COL16A1-207ENST00000466829 EIF5BO60841 1220 aaKnown RBP19.06■□□□□ 0.64
COL16A1-207ENST00000466829 GJB1P08034 283 aa19.06■□□□□ 0.64
COL16A1-207ENST00000466829 CYP2B6P20813 491 aa19.06■□□□□ 0.64
COL16A1-207ENST00000466829 EVI5LQ96CN4 794 aa19.06■□□□□ 0.64
COL16A1-207ENST00000466829 SEC62Q99442 399 aaKnown RBP19.06■□□□□ 0.64
COL16A1-207ENST00000466829 KANSL2Q9H9L4 492 aa19.06■□□□□ 0.64
COL16A1-207ENST00000466829 ZNF287Q9HBT7 754 aa19.06■□□□□ 0.64
COL16A1-207ENST00000466829 HOXC10Q9NYD6 342 aa19.06■□□□□ 0.64
COL16A1-207ENST00000466829 EEF2P13639 858 aaKnown RBP19.05■□□□□ 0.64
COL16A1-207ENST00000466829 COG2Q14746 738 aa19.05■□□□□ 0.64
COL16A1-207ENST00000466829 PRPF38BQ5VTL8 546 aaKnown RBP19.05■□□□□ 0.64
COL16A1-207ENST00000466829 GPR142Q7Z601 462 aa19.05■□□□□ 0.64
COL16A1-207ENST00000466829 PLEKHH3Q7Z736 793 aa19.05■□□□□ 0.64
COL16A1-207ENST00000466829 IFNL3Q8IZI9 196 aa19.05■□□□□ 0.64
COL16A1-207ENST00000466829 SOCS4Q8WXH5 440 aa19.05■□□□□ 0.64
COL16A1-207ENST00000466829 LPAR1Q92633 364 aa19.05■□□□□ 0.64
COL16A1-207ENST00000466829 NAPBQ9H115 298 aa19.05■□□□□ 0.64
COL16A1-207ENST00000466829 PORCNQ9H237 461 aa19.05■□□□□ 0.64
COL16A1-207ENST00000466829 GJD2Q9UKL4 321 aa19.05■□□□□ 0.64
COL16A1-207ENST00000466829 TMX2Q9Y320 296 aa19.05■□□□□ 0.64
COL16A1-207ENST00000466829 TRIM6-TRIM34B2RNG4 842 aa19.04■□□□□ 0.64
COL16A1-207ENST00000466829 FLOT1O75955 427 aa19.04■□□□□ 0.64
COL16A1-207ENST00000466829 TFRCP02786 760 aaKnown RBP19.04■□□□□ 0.64
COL16A1-207ENST00000466829 HMGCRP04035 888 aa19.04■□□□□ 0.64
COL16A1-207ENST00000466829 SLC3A2P08195 630 aaKnown RBP19.04■□□□□ 0.64
COL16A1-207ENST00000466829 GJA8P48165 433 aa19.04■□□□□ 0.64
COL16A1-207ENST00000466829 ZMYM1Q5SVZ6 1142 aa19.04■□□□□ 0.64
COL16A1-207ENST00000466829 ZNF444Q8N0Y2 327 aaPredicted RBP19.04■□□□□ 0.64
COL16A1-207ENST00000466829 VCPKMTQ9H867 229 aa19.04■□□□□ 0.64
COL16A1-207ENST00000466829 EPB41L4AQ9HCS5 686 aaPredicted RBP19.04■□□□□ 0.64
COL16A1-207ENST00000466829 GOPCQ9HD26 462 aa19.04■□□□□ 0.64
COL16A1-207ENST00000466829 IVNS1ABPQ9Y6Y0 642 aa19.04■□□□□ 0.64
COL16A1-207ENST00000466829 SPDYE16A6NNV3 312 aaPredicted RBP19.03■□□□□ 0.64
COL16A1-207ENST00000466829 PLS1Q14651 629 aa19.03■□□□□ 0.64
COL16A1-207ENST00000466829 SIAH1Q8IUQ4 282 aa19.03■□□□□ 0.64
COL16A1-207ENST00000466829 U2AF1L4Q8WU68 220 aaKnown RBP19.03■□□□□ 0.64
COL16A1-207ENST00000466829 DEFB118Q96PH6 123 aa19.03■□□□□ 0.64
COL16A1-207ENST00000466829 MGAMO43451 1857 aa19.03■□□□□ 0.64
COL16A1-207ENST00000466829 TNRC18O15417 2968 aaPredicted RBP19.02■□□□□ 0.64
COL16A1-207ENST00000466829 MYH7P12883 1935 aa19.02■□□□□ 0.64
COL16A1-207ENST00000466829 BAZ2AQ9UIF9 1905 aaKnown RBP19.02■□□□□ 0.64
COL16A1-207ENST00000466829 PRDM1O75626 825 aa19.02■□□□□ 0.64
COL16A1-207ENST00000466829 CNMDO75829 334 aa19.02■□□□□ 0.64
COL16A1-207ENST00000466829 GSPT1P15170 499 aaKnown RBP19.02■□□□□ 0.64
COL16A1-207ENST00000466829 RGS2P41220 211 aa19.02■□□□□ 0.64
COL16A1-207ENST00000466829 KIAA1755Q5JYT7 1200 aa19.02■□□□□ 0.64
COL16A1-207ENST00000466829 POTEEQ6S8J3 1075 aa19.02■□□□□ 0.64
COL16A1-207ENST00000466829 RILPL2Q969X0 211 aa19.02■□□□□ 0.64
COL16A1-207ENST00000466829 BTBD7Q9P203 1132 aa19.02■□□□□ 0.64
COL16A1-207ENST00000466829 SGPL1O95470 568 aa19.01■□□□□ 0.63
COL16A1-207ENST00000466829 ZKSCAN1P17029 563 aaPredicted RBP19.01■□□□□ 0.63
COL16A1-207ENST00000466829 RASA1P20936 1047 aa19.01■□□□□ 0.63
COL16A1-207ENST00000466829 PDE4BQ07343 736 aa19.01■□□□□ 0.63
COL16A1-207ENST00000466829 LBX2Q6XYB7 198 aa19.01■□□□□ 0.63
COL16A1-207ENST00000466829 CCDC129Q6ZRS4 1044 aa19.01■□□□□ 0.63
COL16A1-207ENST00000466829 TRMT44Q8IYL2 757 aaKnown RBP19.01■□□□□ 0.63
COL16A1-207ENST00000466829 SHISA4Q96DD7 197 aa19.01■□□□□ 0.63
COL16A1-207ENST00000466829 HMX1Q9NP08 348 aaPredicted RBP19.01■□□□□ 0.63
COL16A1-207ENST00000466829 WDR46O15213 610 aaKnown RBP19■□□□□ 0.63
COL16A1-207ENST00000466829 XRCC5P13010 732 aaKnown RBP19■□□□□ 0.63
COL16A1-207ENST00000466829 DSG3P32926 999 aa19■□□□□ 0.63
COL16A1-207ENST00000466829 TRIB2Q92519 343 aa19■□□□□ 0.63
COL16A1-207ENST00000466829 PDE4DIPQ5VU43 2346 aa19■□□□□ 0.63
COL16A1-207ENST00000466829 CDC45O75419 566 aa18.99■□□□□ 0.63
COL16A1-207ENST00000466829 TSPY3P0CV98 308 aa18.99■□□□□ 0.63
COL16A1-207ENST00000466829 TSPY8P0CW00 308 aa18.99■□□□□ 0.63
COL16A1-207ENST00000466829 SDSP20132 328 aa18.99■□□□□ 0.63
COL16A1-207ENST00000466829 PPARAQ07869 468 aa18.99■□□□□ 0.63
COL16A1-207ENST00000466829 TRIM32Q13049 653 aa18.99■□□□□ 0.63
COL16A1-207ENST00000466829 MORN1Q5T089 497 aa18.99■□□□□ 0.63
COL16A1-207ENST00000466829 MB21D1Q8N884 522 aa18.99■□□□□ 0.63
COL16A1-207ENST00000466829 DPF3Q92784 378 aa18.99■□□□□ 0.63
COL16A1-207ENST00000466829 APBA2Q99767 749 aa18.99■□□□□ 0.63
COL16A1-207ENST00000466829 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.99■□□□□ 0.63
COL16A1-207ENST00000466829 CLIP2Q9UDT6 1046 aa18.99■□□□□ 0.63
COL16A1-207ENST00000466829 ROBO3Q96MS0 1386 aa18.98■□□□□ 0.63
COL16A1-207ENST00000466829 SLC15A5A6NIM6 579 aa18.98■□□□□ 0.63
COL16A1-207ENST00000466829 FARP2O94887 1054 aaPredicted RBP18.98■□□□□ 0.63
COL16A1-207ENST00000466829 MAP2K5Q13163 448 aa18.98■□□□□ 0.63
COL16A1-207ENST00000466829 FAM83BQ5T0W9 1011 aa18.98■□□□□ 0.63
COL16A1-207ENST00000466829 ATG4CQ96DT6 458 aa18.98■□□□□ 0.63
COL16A1-207ENST00000466829 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.98■□□□□ 0.63
COL16A1-207ENST00000466829 SPATC1LQ9H0A9 340 aa18.98■□□□□ 0.63
COL16A1-207ENST00000466829 HELLSQ9NRZ9 838 aa18.98■□□□□ 0.63
COL16A1-207ENST00000466829 BRCA2P51587 3418 aa18.98■□□□□ 0.63
COL16A1-207ENST00000466829 RPTORQ8N122 1335 aa18.98■□□□□ 0.63
COL16A1-207ENST00000466829 PRKAR2AP13861 404 aaKnown RBP18.97■□□□□ 0.63
COL16A1-207ENST00000466829 PTPREP23469 700 aa18.97■□□□□ 0.63
COL16A1-207ENST00000466829 MCMDC2Q4G0Z9 681 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms