RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 AMOTL1Q8IY63 956 aa23.08■■□□□ 1.29
COL9A3-206ENST00000466532 TANGO6Q9C0B7 1094 aa23.08■■□□□ 1.29
COL9A3-206ENST00000466532 CYP2D7A0A087X1C5 515 aa23.07■■□□□ 1.28
COL9A3-206ENST00000466532 SLC15A5A6NIM6 579 aa23.07■■□□□ 1.28
COL9A3-206ENST00000466532 AKR1B1P15121 316 aa23.07■■□□□ 1.28
COL9A3-206ENST00000466532 PTPREP23469 700 aa23.07■■□□□ 1.28
COL9A3-206ENST00000466532 MNX1P50219 401 aaPredicted RBP23.07■■□□□ 1.28
COL9A3-206ENST00000466532 DDRGK1Q96HY6 314 aa23.07■■□□□ 1.28
COL9A3-206ENST00000466532 PRO3102Q9H379 93 aa23.07■■□□□ 1.28
COL9A3-206ENST00000466532 C11orf49Q9H6J7 331 aa23.07■■□□□ 1.28
COL9A3-206ENST00000466532 ARHGEF10LQ9HCE6 1279 aa23.07■■□□□ 1.28
COL9A3-206ENST00000466532 IVNS1ABPQ9Y6Y0 642 aa23.07■■□□□ 1.28
COL9A3-206ENST00000466532 CCND3P30281 292 aaPredicted RBP23.06■■□□□ 1.28
COL9A3-206ENST00000466532 COG2Q14746 738 aa23.06■■□□□ 1.28
COL9A3-206ENST00000466532 C12orf60Q5U649 245 aa23.06■■□□□ 1.28
COL9A3-206ENST00000466532 CLEC10AQ8IUN9 316 aa23.06■■□□□ 1.28
COL9A3-206ENST00000466532 SLC4A4Q9Y6R1 1079 aa23.06■■□□□ 1.28
COL9A3-206ENST00000466532 GREB1LQ9C091 1923 aaPredicted RBP23.06■■□□□ 1.28
COL9A3-206ENST00000466532 USP17L12C9JPN9 530 aa23.05■■□□□ 1.28
COL9A3-206ENST00000466532 USP17L21D6R901 530 aa23.05■■□□□ 1.28
COL9A3-206ENST00000466532 SMIM22K7EJ46 135 aa23.05■■□□□ 1.28
COL9A3-206ENST00000466532 CDK8P49336 464 aa23.05■■□□□ 1.28
COL9A3-206ENST00000466532 ICA1Q05084 483 aa23.05■■□□□ 1.28
COL9A3-206ENST00000466532 C7orf61Q8IZ16 206 aa23.05■■□□□ 1.28
COL9A3-206ENST00000466532 PUS7LQ9H0K6 701 aaKnown RBP23.05■■□□□ 1.28
COL9A3-206ENST00000466532 ECHDC1Q9NTX5 307 aa23.05■■□□□ 1.28
COL9A3-206ENST00000466532 HOXC10Q9NYD6 342 aa23.05■■□□□ 1.28
COL9A3-206ENST00000466532 MYH4Q9Y623 1939 aa23.05■■□□□ 1.28
COL9A3-206ENST00000466532 GRB14Q14449 540 aa23.04■■□□□ 1.28
COL9A3-206ENST00000466532 KIAA1755Q5JYT7 1200 aa23.04■■□□□ 1.28
COL9A3-206ENST00000466532 CCDC17Q96LX7 622 aa23.04■■□□□ 1.28
COL9A3-206ENST00000466532 SH2D4AQ9H788 454 aa23.04■■□□□ 1.28
COL9A3-206ENST00000466532 FLRT1Q9NZU1 646 aa23.04■■□□□ 1.28
COL9A3-206ENST00000466532 TMX2Q9Y320 296 aa23.04■■□□□ 1.28
COL9A3-206ENST00000466532 PLXNA1Q9UIW2 1896 aa23.04■■□□□ 1.28
COL9A3-206ENST00000466532 RANBP2P49792 3224 aaKnown RBP23.03■■□□□ 1.28
COL9A3-206ENST00000466532 MFSD14CQ5VZR4 134 aa23.03■■□□□ 1.28
COL9A3-206ENST00000466532 C16orf86Q6ZW13 317 aa23.03■■□□□ 1.28
COL9A3-206ENST00000466532 SIAH1Q8IUQ4 282 aa23.03■■□□□ 1.28
COL9A3-206ENST00000466532 LPAR1Q92633 364 aa23.03■■□□□ 1.28
COL9A3-206ENST00000466532 DCTPP1Q9H773 170 aa23.03■■□□□ 1.28
COL9A3-206ENST00000466532 ATP2B2Q01814 1243 aa23.02■■□□□ 1.28
COL9A3-206ENST00000466532 LHX8Q68G74 356 aa23.02■■□□□ 1.28
COL9A3-206ENST00000466532 CTR9Q6PD62 1173 aa23.02■■□□□ 1.28
COL9A3-206ENST00000466532 SPICE1Q8N0Z3 855 aa23.02■■□□□ 1.28
COL9A3-206ENST00000466532 MOV10L1Q9BXT6 1211 aaKnown RBP23.02■■□□□ 1.28
COL9A3-206ENST00000466532 VCPKMTQ9H867 229 aa23.02■■□□□ 1.28
COL9A3-206ENST00000466532 FLOT1O75955 427 aa23.01■■□□□ 1.27
COL9A3-206ENST00000466532 HOXC6P09630 235 aa23.01■■□□□ 1.27
COL9A3-206ENST00000466532 DSG3P32926 999 aa23.01■■□□□ 1.27
COL9A3-206ENST00000466532 NPLOC4Q8TAT6 608 aa23.01■■□□□ 1.27
COL9A3-206ENST00000466532 GPATCH3Q96I76 525 aa23.01■■□□□ 1.27
COL9A3-206ENST00000466532 SPATC1LQ9H0A9 340 aa23.01■■□□□ 1.27
COL9A3-206ENST00000466532 STAP2Q9UGK3 403 aa23.01■■□□□ 1.27
COL9A3-206ENST00000466532 PFASO15067 1338 aa23.01■■□□□ 1.27
COL9A3-206ENST00000466532 PLS1Q14651 629 aa23■■□□□ 1.27
COL9A3-206ENST00000466532 MB21D1Q8N884 522 aa23■■□□□ 1.27
COL9A3-206ENST00000466532 KBTBD3Q8NAB2 608 aa23■■□□□ 1.27
COL9A3-206ENST00000466532 ARPP21Q9UBL0 812 aaPredicted RBP23■■□□□ 1.27
COL9A3-206ENST00000466532 ZMYND8Q9ULU4 1186 aaPredicted RBP23■■□□□ 1.27
COL9A3-206ENST00000466532 SZT2Q5T011 3432 aa22.99■■□□□ 1.27
COL9A3-206ENST00000466532 A0A1W2PPC1 479 aa22.99■■□□□ 1.27
COL9A3-206ENST00000466532 WDR46O15213 610 aaKnown RBP22.99■■□□□ 1.27
COL9A3-206ENST00000466532 EEF2P13639 858 aaKnown RBP22.99■■□□□ 1.27
COL9A3-206ENST00000466532 ERCC3P19447 782 aa22.99■■□□□ 1.27
COL9A3-206ENST00000466532 TSHZ3Q63HK5 1081 aa22.99■■□□□ 1.27
COL9A3-206ENST00000466532 SAMD1Q6SPF0 538 aaPredicted RBP22.99■■□□□ 1.27
COL9A3-206ENST00000466532 DPP9Q86TI2 863 aa22.99■■□□□ 1.27
COL9A3-206ENST00000466532 SHCBP1Q8NEM2 672 aa22.99■■□□□ 1.27
COL9A3-206ENST00000466532 ATG4CQ96DT6 458 aa22.99■■□□□ 1.27
COL9A3-206ENST00000466532 STRBPQ96SI9 672 aaKnown RBP22.99■■□□□ 1.27
COL9A3-206ENST00000466532 STRNO43815 780 aa22.98■■□□□ 1.27
COL9A3-206ENST00000466532 COL6A1P12109 1028 aa22.98■■□□□ 1.27
COL9A3-206ENST00000466532 ADORA2AP29274 412 aa22.98■■□□□ 1.27
COL9A3-206ENST00000466532 CNGA1P29973 690 aa22.98■■□□□ 1.27
COL9A3-206ENST00000466532 CYP2C19P33261 490 aa22.98■■□□□ 1.27
COL9A3-206ENST00000466532 KANSL2Q9H9L4 492 aa22.98■■□□□ 1.27
COL9A3-206ENST00000466532 SYN1P17600 705 aa22.97■■□□□ 1.27
COL9A3-206ENST00000466532 NCAPG2Q86XI2 1143 aa22.97■■□□□ 1.27
COL9A3-206ENST00000466532 APPBP2Q92624 585 aa22.97■■□□□ 1.27
COL9A3-206ENST00000466532 MROH8Q9H579 483 aa22.97■■□□□ 1.27
COL9A3-206ENST00000466532 DDX20Q9UHI6 824 aaKnown RBP22.97■■□□□ 1.27
COL9A3-206ENST00000466532 MSCO60682 206 aa22.96■■□□□ 1.27
COL9A3-206ENST00000466532 SBK1Q52WX2 424 aa22.96■■□□□ 1.27
COL9A3-206ENST00000466532 OSBP2Q969R2 916 aa22.96■■□□□ 1.27
COL9A3-206ENST00000466532 GDF15Q99988 308 aa22.96■■□□□ 1.27
COL9A3-206ENST00000466532 GOPCQ9HD26 462 aa22.96■■□□□ 1.27
COL9A3-206ENST00000466532 SMCHD1A6NHR9 2005 aa22.95■■□□□ 1.26
COL9A3-206ENST00000466532 GSG1L2A8MUP6 293 aa22.95■■□□□ 1.26
COL9A3-206ENST00000466532 RNF113AO15541 343 aaKnown RBP22.95■■□□□ 1.26
COL9A3-206ENST00000466532 RAD21O60216 631 aa22.95■■□□□ 1.26
COL9A3-206ENST00000466532 OLFML2BQ68BL8 750 aa22.95■■□□□ 1.26
COL9A3-206ENST00000466532 GIMAP6Q6P9H5 292 aa22.95■■□□□ 1.26
COL9A3-206ENST00000466532 STK11IPQ8N1F8 1099 aa22.95■■□□□ 1.26
COL9A3-206ENST00000466532 TRPV1Q8NER1 839 aa22.95■■□□□ 1.26
COL9A3-206ENST00000466532 MINDY4BA8MYZ0 360 aa22.94■■□□□ 1.26
COL9A3-206ENST00000466532 IGHA2P01877 340 aa22.94■■□□□ 1.26
COL9A3-206ENST00000466532 ZFYP08048 801 aaPredicted RBP22.94■■□□□ 1.26
COL9A3-206ENST00000466532 CYBAP13498 195 aa22.94■■□□□ 1.26
COL9A3-206ENST00000466532 TMEM132BQ14DG7 1078 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms