RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 ME1P48163 572 aa24.39■■□□□ 1.5
PPP1R3F-203ENST00000466508 STK38Q15208 465 aa24.39■■□□□ 1.5
PPP1R3F-203ENST00000466508 STAG2Q8N3U4 1231 aa24.39■■□□□ 1.5
PPP1R3F-203ENST00000466508 SHISA4Q96DD7 197 aa24.39■■□□□ 1.5
PPP1R3F-203ENST00000466508 PI4KBQ9UBF8 816 aa24.39■■□□□ 1.5
PPP1R3F-203ENST00000466508 DDTLA6NHG4 134 aaPredicted RBP24.38■■□□□ 1.49
PPP1R3F-203ENST00000466508 SPDYE2BA6NHP3 402 aa24.38■■□□□ 1.49
PPP1R3F-203ENST00000466508 ENTPD3O75355 529 aa24.38■■□□□ 1.49
PPP1R3F-203ENST00000466508 SPDYE6P0CI01 402 aa24.38■■□□□ 1.49
PPP1R3F-203ENST00000466508 OGFOD1Q8N543 542 aa24.38■■□□□ 1.49
PPP1R3F-203ENST00000466508 PHF20Q9BVI0 1012 aa24.38■■□□□ 1.49
PPP1R3F-203ENST00000466508 MYH4Q9Y623 1939 aa24.38■■□□□ 1.49
PPP1R3F-203ENST00000466508 ATRNL1Q5VV63 1379 aa24.38■■□□□ 1.49
PPP1R3F-203ENST00000466508 PALM3A6NDB9 673 aaPredicted RBP24.38■■□□□ 1.49
PPP1R3F-203ENST00000466508 GRIN3BO60391 1043 aa24.38■■□□□ 1.49
PPP1R3F-203ENST00000466508 SCG2P13521 617 aa24.38■■□□□ 1.49
PPP1R3F-203ENST00000466508 PFKFB3Q16875 520 aaPredicted RBP24.38■■□□□ 1.49
PPP1R3F-203ENST00000466508 SH3BP5LQ7L8J4 393 aa24.38■■□□□ 1.49
PPP1R3F-203ENST00000466508 AGBL3Q8NEM8 1001 aa24.38■■□□□ 1.49
PPP1R3F-203ENST00000466508 DNAJC18Q9H819 358 aa24.38■■□□□ 1.49
PPP1R3F-203ENST00000466508 ZSCAN29Q8IWY8 852 aaPredicted RBP24.37■■□□□ 1.49
PPP1R3F-203ENST00000466508 CCDC17Q96LX7 622 aa24.37■■□□□ 1.49
PPP1R3F-203ENST00000466508 LZTS2Q9BRK4 669 aa24.37■■□□□ 1.49
PPP1R3F-203ENST00000466508 DDX19AQ9NUU7 478 aaKnown RBP24.37■■□□□ 1.49
PPP1R3F-203ENST00000466508 DACT1Q9NYF0 836 aa24.37■■□□□ 1.49
PPP1R3F-203ENST00000466508 ZBTB12Q9Y330 459 aaPredicted RBP24.37■■□□□ 1.49
PPP1R3F-203ENST00000466508 ARFGEF1Q9Y6D6 1849 aa24.37■■□□□ 1.49
PPP1R3F-203ENST00000466508 NFKBIEO00221 500 aa24.36■■□□□ 1.49
PPP1R3F-203ENST00000466508 SPTLC2O15270 562 aa24.36■■□□□ 1.49
PPP1R3F-203ENST00000466508 PCDHA7Q9UN72 937 aa24.36■■□□□ 1.49
PPP1R3F-203ENST00000466508 NR5A1Q13285 461 aa24.36■■□□□ 1.49
PPP1R3F-203ENST00000466508 SF3A1Q15459 793 aaKnown RBP24.36■■□□□ 1.49
PPP1R3F-203ENST00000466508 MTMR7Q9Y216 660 aa24.36■■□□□ 1.49
PPP1R3F-203ENST00000466508 TTLL1O95922 423 aa24.35■■□□□ 1.49
PPP1R3F-203ENST00000466508 PARP1P09874 1014 aaKnown RBP24.35■■□□□ 1.49
PPP1R3F-203ENST00000466508 CXCL9Q07325 125 aa24.35■■□□□ 1.49
PPP1R3F-203ENST00000466508 SLC39A14Q15043 492 aa24.35■■□□□ 1.49
PPP1R3F-203ENST00000466508 DLGAP5Q15398 846 aa24.35■■□□□ 1.49
PPP1R3F-203ENST00000466508 ADALQ6DHV7 355 aa24.35■■□□□ 1.49
PPP1R3F-203ENST00000466508 OXER1Q8TDS5 423 aa24.35■■□□□ 1.49
PPP1R3F-203ENST00000466508 JDP2Q8WYK2 163 aa24.35■■□□□ 1.49
PPP1R3F-203ENST00000466508 TMOD2Q9NZR1 351 aa24.35■■□□□ 1.49
PPP1R3F-203ENST00000466508 BCS1LQ9Y276 419 aa24.35■■□□□ 1.49
PPP1R3F-203ENST00000466508 NR1I2O75469 434 aa24.34■■□□□ 1.49
PPP1R3F-203ENST00000466508 KRT2P35908 639 aa24.34■■□□□ 1.49
PPP1R3F-203ENST00000466508 FOXP4Q8IVH2 680 aaPredicted RBP24.34■■□□□ 1.49
PPP1R3F-203ENST00000466508 NUP62CLQ9H1M0 184 aa24.34■■□□□ 1.49
PPP1R3F-203ENST00000466508 A0A1W2PQ27 194 aa24.34■■□□□ 1.49
PPP1R3F-203ENST00000466508 A0A1W2PQ64 194 aa24.34■■□□□ 1.49
PPP1R3F-203ENST00000466508 A0A1W2PQD8 194 aa24.34■■□□□ 1.49
PPP1R3F-203ENST00000466508 KLRF2D3W0D1 207 aa24.34■■□□□ 1.49
PPP1R3F-203ENST00000466508 YY1P25490 414 aa24.34■■□□□ 1.49
PPP1R3F-203ENST00000466508 RILPL1Q5EBL4 403 aa24.34■■□□□ 1.49
PPP1R3F-203ENST00000466508 METTL16Q86W50 562 aaKnown RBP24.34■■□□□ 1.49
PPP1R3F-203ENST00000466508 CCAR1Q8IX12 1150 aaKnown RBP24.34■■□□□ 1.49
PPP1R3F-203ENST00000466508 SPZ1Q9BXG8 430 aa24.34■■□□□ 1.49
PPP1R3F-203ENST00000466508 BRMS1Q9HCU9 246 aa24.34■■□□□ 1.49
PPP1R3F-203ENST00000466508 CYTH3O43739 400 aa24.33■■□□□ 1.49
PPP1R3F-203ENST00000466508 SLC35G1Q2M3R5 365 aa24.33■■□□□ 1.49
PPP1R3F-203ENST00000466508 PPP4R3BQ5MIZ7 849 aa24.33■■□□□ 1.49
PPP1R3F-203ENST00000466508 MTMR14Q8NCE2 650 aa24.33■■□□□ 1.49
PPP1R3F-203ENST00000466508 TRIM34Q9BYJ4 488 aa24.33■■□□□ 1.49
PPP1R3F-203ENST00000466508 TSPY26PQ9H489 355 aa24.33■■□□□ 1.49
PPP1R3F-203ENST00000466508 LTBP3Q9NS15 1303 aa24.33■■□□□ 1.49
PPP1R3F-203ENST00000466508 MPHOSPH10O00566 681 aaKnown RBP24.32■■□□□ 1.48
PPP1R3F-203ENST00000466508 SLURP2P0DP57 97 aa24.32■■□□□ 1.48
PPP1R3F-203ENST00000466508 PTPAQ15257 358 aa24.32■■□□□ 1.48
PPP1R3F-203ENST00000466508 NPY5RQ15761 445 aa24.32■■□□□ 1.48
PPP1R3F-203ENST00000466508 CIAPIN1Q6FI81 312 aa24.32■■□□□ 1.48
PPP1R3F-203ENST00000466508 TATDN1Q6P1N9 297 aa24.32■■□□□ 1.48
PPP1R3F-203ENST00000466508 CCDC73Q6ZRK6 1079 aa24.32■■□□□ 1.48
PPP1R3F-203ENST00000466508 RASGRP2Q7LDG7 609 aa24.32■■□□□ 1.48
PPP1R3F-203ENST00000466508 PIBF1Q8WXW3 757 aa24.32■■□□□ 1.48
PPP1R3F-203ENST00000466508 PPP6R2O75170 966 aa24.32■■□□□ 1.48
PPP1R3F-203ENST00000466508 GOLGA8HP0CJ92 632 aa24.32■■□□□ 1.48
PPP1R3F-203ENST00000466508 PDHBP11177 359 aa24.32■■□□□ 1.48
PPP1R3F-203ENST00000466508 SMARCA1P28370 1054 aa24.32■■□□□ 1.48
PPP1R3F-203ENST00000466508 TOB1P50616 345 aaPredicted RBP24.32■■□□□ 1.48
PPP1R3F-203ENST00000466508 USP17L2Q6R6M4 530 aa24.32■■□□□ 1.48
PPP1R3F-203ENST00000466508 CLEC10AQ8IUN9 316 aa24.32■■□□□ 1.48
PPP1R3F-203ENST00000466508 JMYQ8N9B5 988 aa24.32■■□□□ 1.48
PPP1R3F-203ENST00000466508 GOLPH3LQ9H4A5 285 aa24.32■■□□□ 1.48
PPP1R3F-203ENST00000466508 CLSTN2Q9H4D0 955 aa24.32■■□□□ 1.48
PPP1R3F-203ENST00000466508 SH3GLB2Q9NR46 395 aa24.32■■□□□ 1.48
PPP1R3F-203ENST00000466508 FAM196BA6NMK8 535 aa24.31■■□□□ 1.48
PPP1R3F-203ENST00000466508 VEGFAP15692 232 aaPredicted RBP24.31■■□□□ 1.48
PPP1R3F-203ENST00000466508 EIF6P56537 245 aaKnown RBP24.31■■□□□ 1.48
PPP1R3F-203ENST00000466508 CERKLQ49MI3 558 aaPredicted RBP24.31■■□□□ 1.48
PPP1R3F-203ENST00000466508 LRRC47Q8N1G4 583 aaKnown RBP24.31■■□□□ 1.48
PPP1R3F-203ENST00000466508 MRPS27Q92552 414 aaKnown RBP24.31■■□□□ 1.48
PPP1R3F-203ENST00000466508 RBSNQ9H1K0 784 aa24.31■■□□□ 1.48
PPP1R3F-203ENST00000466508 ZNF70Q9UC06 446 aaPredicted RBP24.31■■□□□ 1.48
PPP1R3F-203ENST00000466508 CLIP2Q9UDT6 1046 aa24.31■■□□□ 1.48
PPP1R3F-203ENST00000466508 SNHG28P0DPA3 235 aa24.3■■□□□ 1.48
PPP1R3F-203ENST00000466508 SPDYE2Q495Y8 402 aa24.3■■□□□ 1.48
PPP1R3F-203ENST00000466508 FSIP1Q8NA03 581 aa24.3■■□□□ 1.48
PPP1R3F-203ENST00000466508 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.3■■□□□ 1.48
PPP1R3F-203ENST00000466508 CLRN2A0PK11 232 aa24.3■■□□□ 1.48
PPP1R3F-203ENST00000466508 USP17L5A8MUK1 530 aa24.3■■□□□ 1.48
PPP1R3F-203ENST00000466508 FAM160A1Q05DH4 1040 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms