RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 ZSCAN22P10073 491 aaPredicted RBP21.61■■□□□ 1.05
CAPN3-209ENST00000466222 NOVP48745 357 aa21.61■■□□□ 1.05
CAPN3-209ENST00000466222 ABCB5Q2M3G0 1257 aa21.61■■□□□ 1.05
CAPN3-209ENST00000466222 SIAH1Q8IUQ4 282 aa21.61■■□□□ 1.05
CAPN3-209ENST00000466222 CCDC17Q96LX7 622 aa21.61■■□□□ 1.05
CAPN3-209ENST00000466222 LLPHQ9BRT6 129 aaKnown RBP21.61■■□□□ 1.05
CAPN3-209ENST00000466222 PLEKHA8P1O95397 391 aa21.6■■□□□ 1.05
CAPN3-209ENST00000466222 NT5C2P49902 561 aa21.6■■□□□ 1.05
CAPN3-209ENST00000466222 CHAMP1Q96JM3 812 aa21.6■■□□□ 1.05
CAPN3-209ENST00000466222 TSPY26PQ9H489 355 aa21.6■■□□□ 1.05
CAPN3-209ENST00000466222 ECM29Q5VYK3 1845 aa21.6■■□□□ 1.05
CAPN3-209ENST00000466222 PLIN4Q96Q06 1357 aa21.59■■□□□ 1.05
CAPN3-209ENST00000466222 LETM1O95202 739 aaPredicted RBP21.59■■□□□ 1.05
CAPN3-209ENST00000466222 EPHX2P34913 555 aa21.59■■□□□ 1.05
CAPN3-209ENST00000466222 CSPP1Q1MSJ5 1256 aa21.59■■□□□ 1.05
CAPN3-209ENST00000466222 STAG2Q8N3U4 1231 aa21.59■■□□□ 1.05
CAPN3-209ENST00000466222 GJB4Q9NTQ9 266 aa21.59■■□□□ 1.05
CAPN3-209ENST00000466222 SIPA1L1O43166 1804 aa21.59■■□□□ 1.05
CAPN3-209ENST00000466222 DHX16O60231 1041 aaKnown RBP21.59■■□□□ 1.05
CAPN3-209ENST00000466222 LARP1BQ659C4 914 aaKnown RBP21.59■■□□□ 1.05
CAPN3-209ENST00000466222 CCDC84Q86UT8 332 aaPredicted RBP21.59■■□□□ 1.05
CAPN3-209ENST00000466222 AIFM3Q96NN9 605 aa21.59■■□□□ 1.05
CAPN3-209ENST00000466222 DICER1Q9UPY3 1922 aaKnown RBP21.58■■□□□ 1.05
CAPN3-209ENST00000466222 hCG_1642624A0A1W2PR95 340 aa21.58■■□□□ 1.04
CAPN3-209ENST00000466222 STX6O43752 255 aa21.58■■□□□ 1.04
CAPN3-209ENST00000466222 TBC1D12O60347 775 aa21.58■■□□□ 1.04
CAPN3-209ENST00000466222 DDAH1O94760 285 aa21.58■■□□□ 1.04
CAPN3-209ENST00000466222 GOLGA8HP0CJ92 632 aa21.58■■□□□ 1.04
CAPN3-209ENST00000466222 EEF2P13639 858 aaKnown RBP21.58■■□□□ 1.04
CAPN3-209ENST00000466222 MAP3K10Q02779 954 aa21.58■■□□□ 1.04
CAPN3-209ENST00000466222 CCDC178Q5BJE1 867 aa21.58■■□□□ 1.04
CAPN3-209ENST00000466222 NBPF11Q86T75 865 aa21.58■■□□□ 1.04
CAPN3-209ENST00000466222 APOBEC3FQ8IUX4 373 aaKnown RBP21.58■■□□□ 1.04
CAPN3-209ENST00000466222 PHF20L1A8MW92 1017 aa21.57■■□□□ 1.04
CAPN3-209ENST00000466222 ADM5C9JUS6 153 aa21.57■■□□□ 1.04
CAPN3-209ENST00000466222 TTLL1O95922 423 aa21.57■■□□□ 1.04
CAPN3-209ENST00000466222 TOP1P11387 765 aaKnown RBP21.57■■□□□ 1.04
CAPN3-209ENST00000466222 USP48Q86UV5 1035 aa21.57■■□□□ 1.04
CAPN3-209ENST00000466222 FAM184AQ8NB25 1140 aa21.57■■□□□ 1.04
CAPN3-209ENST00000466222 ORC3Q9UBD5 711 aaPredicted RBP21.57■■□□□ 1.04
CAPN3-209ENST00000466222 NOL7Q9UMY1 257 aaKnown RBP21.57■■□□□ 1.04
CAPN3-209ENST00000466222 EAPPQ56P03 285 aaPredicted RBP21.57■■□□□ 1.04
CAPN3-209ENST00000466222 USP17L2Q6R6M4 530 aa21.57■■□□□ 1.04
CAPN3-209ENST00000466222 CPVLQ9H3G5 476 aa21.57■■□□□ 1.04
CAPN3-209ENST00000466222 NID2Q14112 1375 aa21.56■■□□□ 1.04
CAPN3-209ENST00000466222 ZC3H4Q9UPT8 1303 aaKnown RBP21.56■■□□□ 1.04
CAPN3-209ENST00000466222 USP17L5A8MUK1 530 aa21.56■■□□□ 1.04
CAPN3-209ENST00000466222 POTEIP0CG38 1075 aa21.56■■□□□ 1.04
CAPN3-209ENST00000466222 POTEJP0CG39 1038 aa21.56■■□□□ 1.04
CAPN3-209ENST00000466222 FUT2Q10981 343 aa21.56■■□□□ 1.04
CAPN3-209ENST00000466222 FOXD4L6Q3SYB3 417 aaPredicted RBP21.56■■□□□ 1.04
CAPN3-209ENST00000466222 OTUD7BQ6GQQ9 843 aa21.56■■□□□ 1.04
CAPN3-209ENST00000466222 FOXD4L3Q6VB84 417 aaPredicted RBP21.56■■□□□ 1.04
CAPN3-209ENST00000466222 TMEM179Q6ZVK1 233 aa21.56■■□□□ 1.04
CAPN3-209ENST00000466222 SRBD1Q8N5C6 995 aaKnown RBP21.56■■□□□ 1.04
CAPN3-209ENST00000466222 SLC26A6Q9BXS9 759 aa21.56■■□□□ 1.04
CAPN3-209ENST00000466222 TAF1DQ9H5J8 278 aaPredicted RBP21.56■■□□□ 1.04
CAPN3-209ENST00000466222 MAD2L2Q9UI95 211 aa21.56■■□□□ 1.04
CAPN3-209ENST00000466222 VPS37CA5D8V6 355 aaPredicted RBP21.55■■□□□ 1.04
CAPN3-209ENST00000466222 F13A1P00488 732 aa21.55■■□□□ 1.04
CAPN3-209ENST00000466222 RCAN1P53805 252 aa21.55■■□□□ 1.04
CAPN3-209ENST00000466222 GUCY1B3Q02153 619 aa21.55■■□□□ 1.04
CAPN3-209ENST00000466222 ICA1Q05084 483 aa21.55■■□□□ 1.04
CAPN3-209ENST00000466222 PRKG1Q13976 671 aa21.55■■□□□ 1.04
CAPN3-209ENST00000466222 SLC35G1Q2M3R5 365 aa21.55■■□□□ 1.04
CAPN3-209ENST00000466222 UVSSAQ2YD98 709 aa21.55■■□□□ 1.04
CAPN3-209ENST00000466222 PIBF1Q8WXW3 757 aa21.55■■□□□ 1.04
CAPN3-209ENST00000466222 KANSL2Q9H9L4 492 aa21.55■■□□□ 1.04
CAPN3-209ENST00000466222 CCDC39Q9UFE4 941 aa21.55■■□□□ 1.04
CAPN3-209ENST00000466222 MTMR6Q9Y217 621 aa21.55■■□□□ 1.04
CAPN3-209ENST00000466222 A0A1W2PRG0 241 aa21.55■■□□□ 1.04
CAPN3-209ENST00000466222 CALM1P0DP23 149 aa21.55■■□□□ 1.04
CAPN3-209ENST00000466222 CALM2P0DP24 149 aa21.55■■□□□ 1.04
CAPN3-209ENST00000466222 CALM3P0DP25 149 aa21.55■■□□□ 1.04
CAPN3-209ENST00000466222 IFNAR1P17181 557 aa21.55■■□□□ 1.04
CAPN3-209ENST00000466222 CAP2P40123 477 aa21.55■■□□□ 1.04
CAPN3-209ENST00000466222 UBE2HP62256 183 aa21.55■■□□□ 1.04
CAPN3-209ENST00000466222 HMGN5P82970 282 aaKnown RBP21.55■■□□□ 1.04
CAPN3-209ENST00000466222 CCDC183Q5T5S1 534 aa21.55■■□□□ 1.04
CAPN3-209ENST00000466222 CDC37L1Q7L3B6 337 aa21.55■■□□□ 1.04
CAPN3-209ENST00000466222 CTCFLQ8NI51 663 aaPredicted RBP21.55■■□□□ 1.04
CAPN3-209ENST00000466222 DCPSQ96C86 337 aaKnown RBP21.55■■□□□ 1.04
CAPN3-209ENST00000466222 RAD21O60216 631 aa21.54■■□□□ 1.04
CAPN3-209ENST00000466222 INPP5BP32019 993 aa21.54■■□□□ 1.04
CAPN3-209ENST00000466222 ECE1P42892 770 aa21.54■■□□□ 1.04
CAPN3-209ENST00000466222 TMTC3Q6ZXV5 915 aa21.54■■□□□ 1.04
CAPN3-209ENST00000466222 USP50Q70EL3 339 aaPredicted RBP21.54■■□□□ 1.04
CAPN3-209ENST00000466222 CABP5Q9NP86 173 aa21.54■■□□□ 1.04
CAPN3-209ENST00000466222 ZBTB21Q9ULJ3 1066 aa21.54■■□□□ 1.04
CAPN3-209ENST00000466222 CCDC196A0A1B0GTZ2 297 aa21.53■■□□□ 1.04
CAPN3-209ENST00000466222 TPM2P07951 284 aa21.53■■□□□ 1.04
CAPN3-209ENST00000466222 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.53■■□□□ 1.04
CAPN3-209ENST00000466222 ACER1Q8TDN7 264 aa21.53■■□□□ 1.04
CAPN3-209ENST00000466222 GLIS2Q9BZE0 524 aaPredicted RBP21.53■■□□□ 1.04
CAPN3-209ENST00000466222 FRMPD2Q68DX3 1309 aaPredicted RBP21.53■■□□□ 1.04
CAPN3-209ENST00000466222 ZNF500O60304 480 aaPredicted RBP21.53■■□□□ 1.04
CAPN3-209ENST00000466222 VEGFAP15692 232 aaPredicted RBP21.53■■□□□ 1.04
CAPN3-209ENST00000466222 GRM4Q14833 912 aa21.53■■□□□ 1.04
CAPN3-209ENST00000466222 CPLX2Q6PUV4 134 aaKnown RBP21.53■■□□□ 1.04
CAPN3-209ENST00000466222 KRT26Q7Z3Y9 468 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms