RNA–Protein interactions for RNA: ENST00000466217.5

ATG9A-219, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-219ENST00000466217 SPATC1LQ9H0A9 340 aa16.71■□□□□ 0.27
ATG9A-219ENST00000466217 ANTXR1Q9H6X2 564 aa16.71■□□□□ 0.27
ATG9A-219ENST00000466217 LTBP2Q14767 1821 aa16.7■□□□□ 0.26
ATG9A-219ENST00000466217 KBTBD13C9JR72 458 aa16.7■□□□□ 0.26
ATG9A-219ENST00000466217 SEPT4O43236 478 aa16.7■□□□□ 0.26
ATG9A-219ENST00000466217 POLR3DP05423 398 aaPredicted RBP16.7■□□□□ 0.26
ATG9A-219ENST00000466217 SEPT2Q15019 361 aa16.7■□□□□ 0.26
ATG9A-219ENST00000466217 SLC39A5Q6ZMH5 540 aa16.7■□□□□ 0.26
ATG9A-219ENST00000466217 ERC1Q8IUD2 1116 aa16.7■□□□□ 0.26
ATG9A-219ENST00000466217 COL25A1Q9BXS0 654 aaPredicted RBP16.7■□□□□ 0.26
ATG9A-219ENST00000466217 C1orf115Q9H7X2 142 aa16.7■□□□□ 0.26
ATG9A-219ENST00000466217 SLC5A4Q9NY91 659 aa16.7■□□□□ 0.26
ATG9A-219ENST00000466217 RLFQ13129 1914 aa16.7■□□□□ 0.26
ATG9A-219ENST00000466217 A0A0G2JMZ2 1700 aa16.7■□□□□ 0.26
ATG9A-219ENST00000466217 MAGEB6P1A0A0J9YX57 407 aa16.69■□□□□ 0.26
ATG9A-219ENST00000466217 A0A1W2PRG0 241 aa16.69■□□□□ 0.26
ATG9A-219ENST00000466217 TTF1Q15361 905 aaPredicted RBP16.69■□□□□ 0.26
ATG9A-219ENST00000466217 GJC2Q5T442 439 aaPredicted RBP16.69■□□□□ 0.26
ATG9A-219ENST00000466217 ZNF697Q5TEC3 545 aa16.69■□□□□ 0.26
ATG9A-219ENST00000466217 C1orf53Q5VUE5 145 aa16.69■□□□□ 0.26
ATG9A-219ENST00000466217 FTSJ3Q8IY81 847 aaKnown RBP16.69■□□□□ 0.26
ATG9A-219ENST00000466217 CRNKL1Q9BZJ0 848 aaKnown RBP16.69■□□□□ 0.26
ATG9A-219ENST00000466217 MROH8Q9H579 483 aa16.69■□□□□ 0.26
ATG9A-219ENST00000466217 VCANP13611 3396 aa16.69■□□□□ 0.26
ATG9A-219ENST00000466217 NAV1Q8NEY1 1877 aa16.68■□□□□ 0.26
ATG9A-219ENST00000466217 ERCC3P19447 782 aa16.68■□□□□ 0.26
ATG9A-219ENST00000466217 TMEM179Q6ZVK1 233 aa16.68■□□□□ 0.26
ATG9A-219ENST00000466217 SWAP70Q9UH65 585 aa16.68■□□□□ 0.26
ATG9A-219ENST00000466217 ATP11BQ9Y2G3 1177 aa16.68■□□□□ 0.26
ATG9A-219ENST00000466217 EYSQ5T1H1 3165 aa16.68■□□□□ 0.26
ATG9A-219ENST00000466217 MPHOSPH10O00566 681 aaKnown RBP16.67■□□□□ 0.26
ATG9A-219ENST00000466217 COBLO75128 1261 aa16.67■□□□□ 0.26
ATG9A-219ENST00000466217 DSG3P32926 999 aa16.67■□□□□ 0.26
ATG9A-219ENST00000466217 CEP85Q6P2H3 762 aa16.67■□□□□ 0.26
ATG9A-219ENST00000466217 AACSQ86V21 672 aa16.67■□□□□ 0.26
ATG9A-219ENST00000466217 ITPRIPQ8IWB1 547 aa16.67■□□□□ 0.26
ATG9A-219ENST00000466217 TANGO6Q9C0B7 1094 aa16.67■□□□□ 0.26
ATG9A-219ENST00000466217 MCM9Q9NXL9 1143 aa16.67■□□□□ 0.26
ATG9A-219ENST00000466217 NRBP1Q9UHY1 535 aa16.67■□□□□ 0.26
ATG9A-219ENST00000466217 SPTBN5Q9NRC6 3674 aaKnown RBP16.67■□□□□ 0.26
ATG9A-219ENST00000466217 PDE6AP16499 860 aa16.66■□□□□ 0.26
ATG9A-219ENST00000466217 SMAD3P84022 425 aaKnown RBP16.66■□□□□ 0.26
ATG9A-219ENST00000466217 SLC9C2Q5TAH2 1124 aa16.66■□□□□ 0.26
ATG9A-219ENST00000466217 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.66■□□□□ 0.26
ATG9A-219ENST00000466217 DCP1AQ9NPI6 582 aaPredicted RBP16.66■□□□□ 0.26
ATG9A-219ENST00000466217 LRRC41Q15345 812 aa16.65■□□□□ 0.26
ATG9A-219ENST00000466217 SHHQ15465 462 aa16.65■□□□□ 0.26
ATG9A-219ENST00000466217 TRIM60Q495X7 471 aa16.65■□□□□ 0.26
ATG9A-219ENST00000466217 HSP90AB4PQ58FF6 505 aa16.65■□□□□ 0.26
ATG9A-219ENST00000466217 MAML3Q96JK9 1138 aa16.65■□□□□ 0.26
ATG9A-219ENST00000466217 FAM161BQ96MY7 647 aa16.65■□□□□ 0.26
ATG9A-219ENST00000466217 CDX2Q99626 313 aaPredicted RBP16.65■□□□□ 0.26
ATG9A-219ENST00000466217 SH2D4AQ9H788 454 aa16.65■□□□□ 0.26
ATG9A-219ENST00000466217 ARHGEF10LQ9HCE6 1279 aa16.65■□□□□ 0.26
ATG9A-219ENST00000466217 PDLIM7Q9NR12 457 aa16.65■□□□□ 0.26
ATG9A-219ENST00000466217 TMX2Q9Y320 296 aa16.65■□□□□ 0.26
ATG9A-219ENST00000466217 CDH23Q9H251 3354 aa16.64■□□□□ 0.26
ATG9A-219ENST00000466217 TCRBV5S4A2TA0A5A2 114 aa16.64■□□□□ 0.25
ATG9A-219ENST00000466217 FLOT1O75955 427 aa16.64■□□□□ 0.25
ATG9A-219ENST00000466217 SLC25A27O95847 323 aa16.64■□□□□ 0.25
ATG9A-219ENST00000466217 RLBP1P12271 317 aa16.64■□□□□ 0.25
ATG9A-219ENST00000466217 KIAA1755Q5JYT7 1200 aa16.64■□□□□ 0.25
ATG9A-219ENST00000466217 C9orf50Q5SZB4 431 aa16.64■□□□□ 0.25
ATG9A-219ENST00000466217 ANO1Q5XXA6 986 aa16.64■□□□□ 0.25
ATG9A-219ENST00000466217 BADQ92934 168 aa16.64■□□□□ 0.25
ATG9A-219ENST00000466217 SEMA6BQ9H3T3 888 aa16.64■□□□□ 0.25
ATG9A-219ENST00000466217 VCPKMTQ9H867 229 aa16.64■□□□□ 0.25
ATG9A-219ENST00000466217 PRDM5Q9NQX1 630 aaPredicted RBP16.64■□□□□ 0.25
ATG9A-219ENST00000466217 EXOC6BQ9Y2D4 811 aa16.64■□□□□ 0.25
ATG9A-219ENST00000466217 ZNF532Q9HCE3 1301 aa16.64■□□□□ 0.25
ATG9A-219ENST00000466217 ROBO3Q96MS0 1386 aa16.64■□□□□ 0.25
ATG9A-219ENST00000466217 PRUNE2Q8WUY3 3088 aa16.64■□□□□ 0.25
ATG9A-219ENST00000466217 TMEM265A0A087WTH1 108 aa16.63■□□□□ 0.25
ATG9A-219ENST00000466217 WDR46O15213 610 aaKnown RBP16.63■□□□□ 0.25
ATG9A-219ENST00000466217 FCER1AP12319 257 aa16.63■□□□□ 0.25
ATG9A-219ENST00000466217 ADCYAP1R1P41586 468 aa16.63■□□□□ 0.25
ATG9A-219ENST00000466217 EVX2Q03828 476 aa16.63■□□□□ 0.25
ATG9A-219ENST00000466217 PLS1Q14651 629 aa16.63■□□□□ 0.25
ATG9A-219ENST00000466217 FAM47AQ5JRC9 791 aa16.63■□□□□ 0.25
ATG9A-219ENST00000466217 NCAPG2Q86XI2 1143 aa16.63■□□□□ 0.25
ATG9A-219ENST00000466217 SIAH1Q8IUQ4 282 aa16.63■□□□□ 0.25
ATG9A-219ENST00000466217 RHPN1Q8TCX5 695 aa16.63■□□□□ 0.25
ATG9A-219ENST00000466217 SDR42E1Q8WUS8 393 aa16.63■□□□□ 0.25
ATG9A-219ENST00000466217 ATG4CQ96DT6 458 aa16.63■□□□□ 0.25
ATG9A-219ENST00000466217 CCDC17Q96LX7 622 aa16.63■□□□□ 0.25
ATG9A-219ENST00000466217 PHF24Q9UPV7 400 aa16.63■□□□□ 0.25
ATG9A-219ENST00000466217 TRIM43BA6NCK2 446 aa16.62■□□□□ 0.25
ATG9A-219ENST00000466217 ICA1Q05084 483 aa16.62■□□□□ 0.25
ATG9A-219ENST00000466217 PRAMEF19Q5SWL8 479 aa16.62■□□□□ 0.25
ATG9A-219ENST00000466217 LCORLQ8N3X6 602 aa16.62■□□□□ 0.25
ATG9A-219ENST00000466217 SLC44A5Q8NCS7 719 aa16.62■□□□□ 0.25
ATG9A-219ENST00000466217 TRIM43Q96BQ3 446 aaPredicted RBP16.62■□□□□ 0.25
ATG9A-219ENST00000466217 ATP8A2Q9NTI2 1148 aa16.62■□□□□ 0.25
ATG9A-219ENST00000466217 ADAMTS5Q9UNA0 930 aa16.62■□□□□ 0.25
ATG9A-219ENST00000466217 DIS3Q9Y2L1 958 aaKnown RBP16.62■□□□□ 0.25
ATG9A-219ENST00000466217 TACC3Q9Y6A5 838 aa16.62■□□□□ 0.25
ATG9A-219ENST00000466217 CENPBP07199 599 aaPredicted RBP16.61■□□□□ 0.25
ATG9A-219ENST00000466217 CYP2D6P10635 497 aa16.61■□□□□ 0.25
ATG9A-219ENST00000466217 RARBP10826 455 aa16.61■□□□□ 0.25
ATG9A-219ENST00000466217 TMEM132BQ14DG7 1078 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms