RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 ATRNL1Q5VV63 1379 aa7.07□□□□□ -1.28
CHMP3-206ENST00000466032 MYO5AQ9Y4I1 1855 aaKnown RBP7.07□□□□□ -1.28
CHMP3-206ENST00000466032 PITPNM2Q9BZ72 1349 aa7.06□□□□□ -1.28
CHMP3-206ENST00000466032 CCDC196A0A1B0GTZ2 297 aa7.06□□□□□ -1.28
CHMP3-206ENST00000466032 MINDY4BA8MYZ0 360 aa7.06□□□□□ -1.28
CHMP3-206ENST00000466032 SMAPO00193 183 aa7.06□□□□□ -1.28
CHMP3-206ENST00000466032 FOXP2O15409 715 aa7.06□□□□□ -1.28
CHMP3-206ENST00000466032 PRKAB2O43741 272 aa7.06□□□□□ -1.28
CHMP3-206ENST00000466032 WDHD1O75717 1129 aaPredicted RBP7.06□□□□□ -1.28
CHMP3-206ENST00000466032 HSP90AA1P07900 732 aaKnown RBP7.06□□□□□ -1.28
CHMP3-206ENST00000466032 YBX3P16989 372 aaKnown RBP eCLIP7.06□□□□□ -1.28
CHMP3-206ENST00000466032 RPIAP49247 311 aa7.06□□□□□ -1.28
CHMP3-206ENST00000466032 EVCP57679 992 aa7.06□□□□□ -1.28
CHMP3-206ENST00000466032 EXOSC10Q01780 885 aaKnown RBP7.06□□□□□ -1.28
CHMP3-206ENST00000466032 GRIK5Q16478 980 aa7.06□□□□□ -1.28
CHMP3-206ENST00000466032 C9orf131Q5VYM1 1079 aa7.06□□□□□ -1.28
CHMP3-206ENST00000466032 CPLX2Q6PUV4 134 aaKnown RBP7.06□□□□□ -1.28
CHMP3-206ENST00000466032 C16orf86Q6ZW13 317 aa7.06□□□□□ -1.28
CHMP3-206ENST00000466032 USP50Q70EL3 339 aaPredicted RBP7.06□□□□□ -1.28
CHMP3-206ENST00000466032 SLC51AQ86UW1 340 aa7.06□□□□□ -1.28
CHMP3-206ENST00000466032 PNMA8AQ86V59 439 aaPredicted RBP7.06□□□□□ -1.28
CHMP3-206ENST00000466032 METTL16Q86W50 562 aaKnown RBP7.06□□□□□ -1.28
CHMP3-206ENST00000466032 DGKHQ86XP1 1220 aa7.06□□□□□ -1.28
CHMP3-206ENST00000466032 RGS22Q8NE09 1264 aa7.06□□□□□ -1.28
CHMP3-206ENST00000466032 ZNF274Q96GC6 653 aaPredicted RBP7.06□□□□□ -1.28
CHMP3-206ENST00000466032 UBAC1Q9BSL1 405 aa7.06□□□□□ -1.28
CHMP3-206ENST00000466032 AGXT2Q9BYV1 514 aa7.06□□□□□ -1.28
CHMP3-206ENST00000466032 EPB41L4AQ9HCS5 686 aaPredicted RBP7.06□□□□□ -1.28
CHMP3-206ENST00000466032 ADARB2Q9NS39 739 aaKnown RBP7.06□□□□□ -1.28
CHMP3-206ENST00000466032 GPRC5DQ9NZD1 345 aa7.06□□□□□ -1.28
CHMP3-206ENST00000466032 PALD1Q9ULE6 856 aa7.06□□□□□ -1.28
CHMP3-206ENST00000466032 SYNPO2Q9UMS6 1093 aa7.06□□□□□ -1.28
CHMP3-206ENST00000466032 GJA3Q9Y6H8 435 aa7.06□□□□□ -1.28
CHMP3-206ENST00000466032 SCN9AQ15858 1988 aa7.06□□□□□ -1.28
CHMP3-206ENST00000466032 TIAM2Q8IVF5 1701 aa7.05□□□□□ -1.28
CHMP3-206ENST00000466032 GLTPD2A6NH11 291 aa7.05□□□□□ -1.28
CHMP3-206ENST00000466032 WNT10BO00744 389 aa7.05□□□□□ -1.28
CHMP3-206ENST00000466032 TLL1O43897 1013 aa7.05□□□□□ -1.28
CHMP3-206ENST00000466032 CHGBP05060 677 aa7.05□□□□□ -1.28
CHMP3-206ENST00000466032 CALM1P0DP23 149 aa7.05□□□□□ -1.28
CHMP3-206ENST00000466032 CALM2P0DP24 149 aa7.05□□□□□ -1.28
CHMP3-206ENST00000466032 CALM3P0DP25 149 aa7.05□□□□□ -1.28
CHMP3-206ENST00000466032 GMPSP49915 693 aaPredicted RBP7.05□□□□□ -1.28
CHMP3-206ENST00000466032 KIF4BQ2VIQ3 1234 aa7.05□□□□□ -1.28
CHMP3-206ENST00000466032 SLFNL1Q499Z3 407 aa7.05□□□□□ -1.28
CHMP3-206ENST00000466032 DCAF15Q66K64 600 aa7.05□□□□□ -1.28
CHMP3-206ENST00000466032 SGMS1Q86VZ5 419 aa7.05□□□□□ -1.28
CHMP3-206ENST00000466032 MAPKAPK5Q8IW41 473 aa7.05□□□□□ -1.28
CHMP3-206ENST00000466032 MB21D2Q8IYB1 491 aaPredicted RBP7.05□□□□□ -1.28
CHMP3-206ENST00000466032 PRMT6Q96LA8 375 aaPredicted RBP7.05□□□□□ -1.28
CHMP3-206ENST00000466032 MAP3K14Q99558 947 aa7.05□□□□□ -1.28
CHMP3-206ENST00000466032 CRISPLD2Q9H0B8 497 aa7.05□□□□□ -1.28
CHMP3-206ENST00000466032 TOMM22Q9NS69 142 aa7.05□□□□□ -1.28
CHMP3-206ENST00000466032 ZNF70Q9UC06 446 aaPredicted RBP7.05□□□□□ -1.28
CHMP3-206ENST00000466032 ANGEL1Q9UNK9 670 aaKnown RBP7.05□□□□□ -1.28
CHMP3-206ENST00000466032 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.05□□□□□ -1.28
CHMP3-206ENST00000466032 LAMA4Q16363 1823 aa7.05□□□□□ -1.28
CHMP3-206ENST00000466032 SBF1O95248 1867 aa7.04□□□□□ -1.28
CHMP3-206ENST00000466032 ZNF646O15015 1829 aaPredicted RBP7.04□□□□□ -1.28
CHMP3-206ENST00000466032 CCDC69A6NI79 296 aa7.04□□□□□ -1.28
CHMP3-206ENST00000466032 TSPY2A6NKD2 308 aa7.04□□□□□ -1.28
CHMP3-206ENST00000466032 STK25O00506 426 aa7.04□□□□□ -1.28
CHMP3-206ENST00000466032 IFIT3O14879 490 aaKnown RBP7.04□□□□□ -1.28
CHMP3-206ENST00000466032 PRC1O43663 620 aa7.04□□□□□ -1.28
CHMP3-206ENST00000466032 KDM4AO75164 1064 aa7.04□□□□□ -1.28
CHMP3-206ENST00000466032 CDKL5O76039 1030 aa7.04□□□□□ -1.28
CHMP3-206ENST00000466032 TSPY3P0CV98 308 aa7.04□□□□□ -1.28
CHMP3-206ENST00000466032 TSPY8P0CW00 308 aa7.04□□□□□ -1.28
CHMP3-206ENST00000466032 CDK8P49336 464 aa7.04□□□□□ -1.28
CHMP3-206ENST00000466032 HAND2P61296 217 aa7.04□□□□□ -1.28
CHMP3-206ENST00000466032 MAP3K10Q02779 954 aa7.04□□□□□ -1.28
CHMP3-206ENST00000466032 GABPAQ06546 454 aa7.04□□□□□ -1.28
CHMP3-206ENST00000466032 WTAPQ15007 396 aa7.04□□□□□ -1.28
CHMP3-206ENST00000466032 ADCK5Q3MIX3 580 aa7.04□□□□□ -1.28
CHMP3-206ENST00000466032 SUPT20HL1Q3ZLR7 823 aa7.04□□□□□ -1.28
CHMP3-206ENST00000466032 KANK3Q6NY19 840 aa7.04□□□□□ -1.28
CHMP3-206ENST00000466032 ZSCAN29Q8IWY8 852 aaPredicted RBP7.04□□□□□ -1.28
CHMP3-206ENST00000466032 CRACR2BQ8N4Y2 399 aaPredicted RBP7.04□□□□□ -1.28
CHMP3-206ENST00000466032 ANKS1AQ92625 1134 aa7.04□□□□□ -1.28
CHMP3-206ENST00000466032 EPAS1Q99814 870 aa7.04□□□□□ -1.28
CHMP3-206ENST00000466032 LLPHQ9BRT6 129 aaKnown RBP7.04□□□□□ -1.28
CHMP3-206ENST00000466032 MXD3Q9BW11 206 aa7.04□□□□□ -1.28
CHMP3-206ENST00000466032 TBC1D2Q9BYX2 928 aa7.04□□□□□ -1.28
CHMP3-206ENST00000466032 UPF3BQ9BZI7 483 aaKnown RBP7.04□□□□□ -1.28
CHMP3-206ENST00000466032 TDRD3Q9H7E2 651 aaKnown RBP7.04□□□□□ -1.28
CHMP3-206ENST00000466032 CABP5Q9NP86 173 aa7.04□□□□□ -1.28
CHMP3-206ENST00000466032 HACL1Q9UJ83 578 aa7.04□□□□□ -1.28
CHMP3-206ENST00000466032 FOCADQ5VW36 1801 aa7.04□□□□□ -1.28
CHMP3-206ENST00000466032 ZNF541Q9H0D2 1346 aa7.03□□□□□ -1.28
CHMP3-206ENST00000466032 COL4A5P29400 1685 aa7.03□□□□□ -1.28
CHMP3-206ENST00000466032 UNCXA6NJT0 531 aa7.03□□□□□ -1.28
CHMP3-206ENST00000466032 RANBP6O60518 1105 aaKnown RBP7.03□□□□□ -1.28
CHMP3-206ENST00000466032 ECM2O94769 699 aaPredicted RBP7.03□□□□□ -1.28
CHMP3-206ENST00000466032 PDCP20941 246 aa7.03□□□□□ -1.28
CHMP3-206ENST00000466032 NF2P35240 595 aa7.03□□□□□ -1.28
CHMP3-206ENST00000466032 GNAQP50148 359 aa7.03□□□□□ -1.28
CHMP3-206ENST00000466032 AK2P54819 239 aa7.03□□□□□ -1.28
CHMP3-206ENST00000466032 HMGN5P82970 282 aaKnown RBP7.03□□□□□ -1.28
CHMP3-206ENST00000466032 CTDSPL2Q05D32 466 aa7.03□□□□□ -1.28
CHMP3-206ENST00000466032 PICALMQ13492 652 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms