RNA–Protein interactions for RNA: ENST00000465819.1

CSMD2-207, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 5

Gene CSMD2, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-207ENST00000465819 ATP8B2P98198 1209 aa13.58□□□□□ -0.24
CSMD2-207ENST00000465819 CERS3Q8IU89 383 aa13.58□□□□□ -0.24
CSMD2-207ENST00000465819 MIGA1Q8NAN2 632 aa13.58□□□□□ -0.24
CSMD2-207ENST00000465819 MOV10L1Q9BXT6 1211 aaKnown RBP13.58□□□□□ -0.24
CSMD2-207ENST00000465819 CABP5Q9NP86 173 aa13.58□□□□□ -0.24
CSMD2-207ENST00000465819 VCANP13611 3396 aa13.58□□□□□ -0.24
CSMD2-207ENST00000465819 EYSQ5T1H1 3165 aa13.58□□□□□ -0.24
CSMD2-207ENST00000465819 NAV1Q8NEY1 1877 aa13.57□□□□□ -0.24
CSMD2-207ENST00000465819 OS9Q13438 667 aaPredicted RBP13.57□□□□□ -0.24
CSMD2-207ENST00000465819 SH3RF1Q7Z6J0 888 aa13.57□□□□□ -0.24
CSMD2-207ENST00000465819 TTC6Q86TZ1 520 aa13.57□□□□□ -0.24
CSMD2-207ENST00000465819 SYMPKQ92797 1274 aaKnown RBP13.57□□□□□ -0.24
CSMD2-207ENST00000465819 TLR7Q9NYK1 1049 aaKnown RBP13.57□□□□□ -0.24
CSMD2-207ENST00000465819 LAMA2P24043 3122 aaKnown RBP13.57□□□□□ -0.24
CSMD2-207ENST00000465819 TMEM265A0A087WTH1 108 aa13.56□□□□□ -0.24
CSMD2-207ENST00000465819 TRIM43BA6NCK2 446 aa13.56□□□□□ -0.24
CSMD2-207ENST00000465819 COBLO75128 1261 aa13.56□□□□□ -0.24
CSMD2-207ENST00000465819 IDH1O75874 414 aaKnown RBP13.56□□□□□ -0.24
CSMD2-207ENST00000465819 ERCC3P19447 782 aa13.56□□□□□ -0.24
CSMD2-207ENST00000465819 GUCY1A2P33402 732 aa13.56□□□□□ -0.24
CSMD2-207ENST00000465819 SHMT1P34896 483 aa13.56□□□□□ -0.24
CSMD2-207ENST00000465819 ADCYAP1R1P41586 468 aa13.56□□□□□ -0.24
CSMD2-207ENST00000465819 C1orf53Q5VUE5 145 aa13.56□□□□□ -0.24
CSMD2-207ENST00000465819 MAGEB6Q8N7X4 407 aa13.56□□□□□ -0.24
CSMD2-207ENST00000465819 SHCBP1Q8NEM2 672 aa13.56□□□□□ -0.24
CSMD2-207ENST00000465819 FERMT2Q96AC1 680 aa13.56□□□□□ -0.24
CSMD2-207ENST00000465819 TRIM43Q96BQ3 446 aaPredicted RBP13.56□□□□□ -0.24
CSMD2-207ENST00000465819 RNPC3Q96LT9 517 aaKnown RBP13.56□□□□□ -0.24
CSMD2-207ENST00000465819 SPATC1LQ9H0A9 340 aa13.56□□□□□ -0.24
CSMD2-207ENST00000465819 SLC5A4Q9NY91 659 aa13.56□□□□□ -0.24
CSMD2-207ENST00000465819 COG2Q14746 738 aa13.55□□□□□ -0.24
CSMD2-207ENST00000465819 LRRC41Q15345 812 aa13.55□□□□□ -0.24
CSMD2-207ENST00000465819 FAM47AQ5JRC9 791 aa13.55□□□□□ -0.24
CSMD2-207ENST00000465819 PRAMEF19Q5SWL8 479 aa13.55□□□□□ -0.24
CSMD2-207ENST00000465819 TANGO6Q9C0B7 1094 aa13.55□□□□□ -0.24
CSMD2-207ENST00000465819 HOXC10Q9NYD6 342 aa13.55□□□□□ -0.24
CSMD2-207ENST00000465819 DBNLQ9UJU6 430 aaKnown RBP13.55□□□□□ -0.24
CSMD2-207ENST00000465819 NOP58Q9Y2X3 529 aaKnown RBP13.55□□□□□ -0.24
CSMD2-207ENST00000465819 ZNFX1Q9P2E3 1918 aaKnown RBP13.54□□□□□ -0.24
CSMD2-207ENST00000465819 SURF6O75683 361 aaKnown RBP13.54□□□□□ -0.24
CSMD2-207ENST00000465819 ITGB8P26012 769 aa13.54□□□□□ -0.24
CSMD2-207ENST00000465819 PLCD1P51178 756 aa13.54□□□□□ -0.24
CSMD2-207ENST00000465819 TLE2Q04725 743 aa13.54□□□□□ -0.24
CSMD2-207ENST00000465819 SEPT2Q15019 361 aa13.54□□□□□ -0.24
CSMD2-207ENST00000465819 PANK1Q8TE04 598 aa13.54□□□□□ -0.24
CSMD2-207ENST00000465819 EAF2Q96CJ1 260 aaPredicted RBP13.54□□□□□ -0.24
CSMD2-207ENST00000465819 PHF24Q9UPV7 400 aa13.54□□□□□ -0.24
CSMD2-207ENST00000465819 TACC3Q9Y6A5 838 aa13.54□□□□□ -0.24
CSMD2-207ENST00000465819 SMCHD1A6NHR9 2005 aa13.54□□□□□ -0.24
CSMD2-207ENST00000465819 CDH23Q9H251 3354 aa13.54□□□□□ -0.24
CSMD2-207ENST00000465819 PARP14Q460N5 1801 aa13.53□□□□□ -0.24
CSMD2-207ENST00000465819 A0A1W2PRG0 241 aa13.53□□□□□ -0.24
CSMD2-207ENST00000465819 POLR3DP05423 398 aaPredicted RBP13.53□□□□□ -0.24
CSMD2-207ENST00000465819 CLTBP09497 229 aa13.53□□□□□ -0.24
CSMD2-207ENST00000465819 GABPAQ06546 454 aa13.53□□□□□ -0.24
CSMD2-207ENST00000465819 PLS1Q14651 629 aa13.53□□□□□ -0.24
CSMD2-207ENST00000465819 NCAPG2Q86XI2 1143 aa13.53□□□□□ -0.24
CSMD2-207ENST00000465819 ABRAQ8N0Z2 381 aa13.53□□□□□ -0.24
CSMD2-207ENST00000465819 MB21D1Q8N884 522 aa13.53□□□□□ -0.24
CSMD2-207ENST00000465819 MAML3Q96JK9 1138 aa13.53□□□□□ -0.24
CSMD2-207ENST00000465819 CCDC8Q9H0W5 538 aaPredicted RBP13.53□□□□□ -0.24
CSMD2-207ENST00000465819 MROH8Q9H579 483 aa13.53□□□□□ -0.24
CSMD2-207ENST00000465819 MYH8P13535 1937 aa13.52□□□□□ -0.24
CSMD2-207ENST00000465819 SPTBN5Q9NRC6 3674 aaKnown RBP13.52□□□□□ -0.24
CSMD2-207ENST00000465819 MPHOSPH10O00566 681 aaKnown RBP13.52□□□□□ -0.25
CSMD2-207ENST00000465819 KIAA0355O15063 1070 aa13.52□□□□□ -0.25
CSMD2-207ENST00000465819 EPHB4P54760 987 aa13.52□□□□□ -0.25
CSMD2-207ENST00000465819 MAP3K12Q12852 859 aa13.52□□□□□ -0.25
CSMD2-207ENST00000465819 GRIN2CQ14957 1233 aa13.52□□□□□ -0.25
CSMD2-207ENST00000465819 TJAP1Q5JTD0 557 aa13.52□□□□□ -0.25
CSMD2-207ENST00000465819 CEP85Q6P2H3 762 aa13.52□□□□□ -0.25
CSMD2-207ENST00000465819 TMED8Q6PL24 325 aaPredicted RBP13.52□□□□□ -0.25
CSMD2-207ENST00000465819 ITPRIPQ8IWB1 547 aa13.52□□□□□ -0.25
CSMD2-207ENST00000465819 USP38Q8NB14 1042 aa13.52□□□□□ -0.25
CSMD2-207ENST00000465819 XPNPEP3Q9NQH7 507 aa13.52□□□□□ -0.25
CSMD2-207ENST00000465819 PLXNA1Q9UIW2 1896 aa13.52□□□□□ -0.25
CSMD2-207ENST00000465819 PRUNE2Q8WUY3 3088 aa13.51□□□□□ -0.25
CSMD2-207ENST00000465819 COL11A1P12107 1806 aaPredicted RBP13.51□□□□□ -0.25
CSMD2-207ENST00000465819 FLOT1O75955 427 aa13.51□□□□□ -0.25
CSMD2-207ENST00000465819 RARBP10826 455 aa13.51□□□□□ -0.25
CSMD2-207ENST00000465819 FCER1AP12319 257 aa13.51□□□□□ -0.25
CSMD2-207ENST00000465819 RAG1P15918 1043 aa13.51□□□□□ -0.25
CSMD2-207ENST00000465819 DNAJB2P25686 324 aa13.51□□□□□ -0.25
CSMD2-207ENST00000465819 DSG3P32926 999 aa13.51□□□□□ -0.25
CSMD2-207ENST00000465819 FPGSQ05932 587 aa13.51□□□□□ -0.25
CSMD2-207ENST00000465819 KIAA1755Q5JYT7 1200 aa13.51□□□□□ -0.25
CSMD2-207ENST00000465819 RNF180Q86T96 592 aa13.51□□□□□ -0.25
CSMD2-207ENST00000465819 RIOK1Q9BRS2 568 aaKnown RBP13.51□□□□□ -0.25
CSMD2-207ENST00000465819 ANTXR1Q9H6X2 564 aa13.51□□□□□ -0.25
CSMD2-207ENST00000465819 NRBP1Q9UHY1 535 aa13.51□□□□□ -0.25
CSMD2-207ENST00000465819 ROBO3Q96MS0 1386 aa13.5□□□□□ -0.25
CSMD2-207ENST00000465819 MAGEB6P1A0A0J9YX57 407 aa13.5□□□□□ -0.25
CSMD2-207ENST00000465819 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.5□□□□□ -0.25
CSMD2-207ENST00000465819 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.5□□□□□ -0.25
CSMD2-207ENST00000465819 A0A1W2PQ45 241 aaPredicted RBP13.5□□□□□ -0.25
CSMD2-207ENST00000465819 A0A1W2PQY0 241 aa13.5□□□□□ -0.25
CSMD2-207ENST00000465819 TNFRSF10AO00220 468 aa13.5□□□□□ -0.25
CSMD2-207ENST00000465819 PQBP1O60828 265 aaKnown RBP13.5□□□□□ -0.25
CSMD2-207ENST00000465819 EVX2Q03828 476 aa13.5□□□□□ -0.25
CSMD2-207ENST00000465819 SIRT2Q8IXJ6 389 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms