RNA–Protein interactions for RNA: ENST00000465705.3

TMCO1-204, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5

Gene TMCO1, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-204ENST00000465705 MAP4K1Q92918 833 aa13.37□□□□□ -0.27
TMCO1-204ENST00000465705 LSG1Q9H089 658 aaKnown RBP13.37□□□□□ -0.27
TMCO1-204ENST00000465705 NBPF3Q9H094 633 aa13.37□□□□□ -0.27
TMCO1-204ENST00000465705 RBM8AQ9Y5S9 174 aaKnown RBP13.37□□□□□ -0.27
TMCO1-204ENST00000465705 PLIN4Q96Q06 1357 aa13.36□□□□□ -0.27
TMCO1-204ENST00000465705 TESPA1A2RU30 521 aaPredicted RBP13.36□□□□□ -0.27
TMCO1-204ENST00000465705 USP17L10C9JJH3 530 aa13.36□□□□□ -0.27
TMCO1-204ENST00000465705 RANBP6O60518 1105 aaKnown RBP13.36□□□□□ -0.27
TMCO1-204ENST00000465705 REC8O95072 547 aa13.36□□□□□ -0.27
TMCO1-204ENST00000465705 HMGCS2P54868 508 aa13.36□□□□□ -0.27
TMCO1-204ENST00000465705 TFAP4Q01664 338 aa13.36□□□□□ -0.27
TMCO1-204ENST00000465705 FAM47AQ5JRC9 791 aa13.36□□□□□ -0.27
TMCO1-204ENST00000465705 GADL1Q6ZQY3 521 aa13.36□□□□□ -0.27
TMCO1-204ENST00000465705 FASTKD5Q7L8L6 764 aaKnown RBP13.36□□□□□ -0.27
TMCO1-204ENST00000465705 CLEC10AQ8IUN9 316 aa13.36□□□□□ -0.27
TMCO1-204ENST00000465705 KANSL2Q9H9L4 492 aa13.36□□□□□ -0.27
TMCO1-204ENST00000465705 ARHGEF10LQ9HCE6 1279 aa13.36□□□□□ -0.27
TMCO1-204ENST00000465705 INCENPQ9NQS7 918 aa13.36□□□□□ -0.27
TMCO1-204ENST00000465705 WBP1LQ9NX94 342 aa13.36□□□□□ -0.27
TMCO1-204ENST00000465705 TMOD4Q9NZQ9 345 aa13.36□□□□□ -0.27
TMCO1-204ENST00000465705 PTPRFP10586 1907 aa13.36□□□□□ -0.27
TMCO1-204ENST00000465705 NEDD4P46934 1319 aa13.36□□□□□ -0.27
TMCO1-204ENST00000465705 GREB1LQ9C091 1923 aaPredicted RBP13.35□□□□□ -0.27
TMCO1-204ENST00000465705 C19orf81C9J6K1 198 aa13.35□□□□□ -0.27
TMCO1-204ENST00000465705 IGF2BP3O00425 579 aaKnown RBP eCLIP13.35□□□□□ -0.27
TMCO1-204ENST00000465705 CA12O43570 354 aa13.35□□□□□ -0.27
TMCO1-204ENST00000465705 ALDH1A1P00352 501 aa13.35□□□□□ -0.27
TMCO1-204ENST00000465705 CYP21A2P08686 494 aa13.35□□□□□ -0.27
TMCO1-204ENST00000465705 FGRP09769 529 aa13.35□□□□□ -0.27
TMCO1-204ENST00000465705 BACE1P56817 501 aa13.35□□□□□ -0.27
TMCO1-204ENST00000465705 ATP2B2Q01814 1243 aa13.35□□□□□ -0.27
TMCO1-204ENST00000465705 ZYXQ15942 572 aaKnown RBP13.35□□□□□ -0.27
TMCO1-204ENST00000465705 NEDD1Q8NHV4 660 aa13.35□□□□□ -0.27
TMCO1-204ENST00000465705 ESR2Q92731 530 aa13.35□□□□□ -0.27
TMCO1-204ENST00000465705 PTPN18Q99952 460 aa13.35□□□□□ -0.27
TMCO1-204ENST00000465705 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.35□□□□□ -0.27
TMCO1-204ENST00000465705 SH2D4AQ9H788 454 aa13.35□□□□□ -0.27
TMCO1-204ENST00000465705 TACC3Q9Y6A5 838 aa13.35□□□□□ -0.27
TMCO1-204ENST00000465705 LOC285556D6RIA3 1793 aa13.35□□□□□ -0.27
TMCO1-204ENST00000465705 BTBD19C9JJ37 291 aa13.34□□□□□ -0.27
TMCO1-204ENST00000465705 HSPA1AP0DMV8 641 aaKnown RBP13.34□□□□□ -0.27
TMCO1-204ENST00000465705 HSPA1BP0DMV9 641 aaKnown RBP13.34□□□□□ -0.27
TMCO1-204ENST00000465705 EEF2P13639 858 aaKnown RBP13.34□□□□□ -0.27
TMCO1-204ENST00000465705 HOXB3P14651 431 aaPredicted RBP13.34□□□□□ -0.27
TMCO1-204ENST00000465705 NT5C2P49902 561 aa13.34□□□□□ -0.27
TMCO1-204ENST00000465705 USP14P54578 494 aa13.34□□□□□ -0.27
TMCO1-204ENST00000465705 SH3D19Q5HYK7 790 aa13.34□□□□□ -0.27
TMCO1-204ENST00000465705 PPP4R3BQ5MIZ7 849 aa13.34□□□□□ -0.27
TMCO1-204ENST00000465705 USP17L2Q6R6M4 530 aa13.34□□□□□ -0.27
TMCO1-204ENST00000465705 FAM43AQ8N2R8 423 aa13.34□□□□□ -0.27
TMCO1-204ENST00000465705 PROCA1Q8NCQ7 364 aaPredicted RBP13.34□□□□□ -0.27
TMCO1-204ENST00000465705 ACER1Q8TDN7 264 aa13.34□□□□□ -0.27
TMCO1-204ENST00000465705 CEP95Q96GE4 821 aa13.34□□□□□ -0.27
TMCO1-204ENST00000465705 KRT23Q9C075 422 aa13.34□□□□□ -0.27
TMCO1-204ENST00000465705 KIAA1683Q9H0B3 1180 aa13.34□□□□□ -0.27
TMCO1-204ENST00000465705 CNNM2Q9H8M5 875 aa13.34□□□□□ -0.27
TMCO1-204ENST00000465705 ZCCHC17Q9NP64 241 aaKnown RBP13.34□□□□□ -0.27
TMCO1-204ENST00000465705 RNF186Q9NXI6 227 aa13.34□□□□□ -0.27
TMCO1-204ENST00000465705 SAGE1Q9NXZ1 904 aa13.34□□□□□ -0.27
TMCO1-204ENST00000465705 IGKV6D-41A0A0C4DH26 115 aa13.33□□□□□ -0.28
TMCO1-204ENST00000465705 B4E1Z4 1266 aa13.33□□□□□ -0.28
TMCO1-204ENST00000465705 TRPA1O75762 1119 aa13.33□□□□□ -0.28
TMCO1-204ENST00000465705 TRDNQ13061 729 aa13.33□□□□□ -0.28
TMCO1-204ENST00000465705 DGKZQ13574 1117 aa13.33□□□□□ -0.28
TMCO1-204ENST00000465705 MOGSQ13724 837 aa13.33□□□□□ -0.28
TMCO1-204ENST00000465705 RNF20Q5VTR2 975 aa13.33□□□□□ -0.28
TMCO1-204ENST00000465705 ANKRD23Q86SG2 305 aa13.33□□□□□ -0.28
TMCO1-204ENST00000465705 AGTPBP1Q9UPW5 1226 aa13.33□□□□□ -0.28
TMCO1-204ENST00000465705 A0A1W2PRG0 241 aa13.32□□□□□ -0.28
TMCO1-204ENST00000465705 PDHXO00330 501 aa13.32□□□□□ -0.28
TMCO1-204ENST00000465705 SLC27A2O14975 620 aa13.32□□□□□ -0.28
TMCO1-204ENST00000465705 KDM4AO75164 1064 aa13.32□□□□□ -0.28
TMCO1-204ENST00000465705 TTLL1O95922 423 aa13.32□□□□□ -0.28
TMCO1-204ENST00000465705 PABPC4Q13310 644 aaKnown RBP eCLIP13.32□□□□□ -0.28
TMCO1-204ENST00000465705 TAF1CQ15572 869 aaPredicted RBP13.32□□□□□ -0.28
TMCO1-204ENST00000465705 CREB3L3Q68CJ9 461 aa13.32□□□□□ -0.28
TMCO1-204ENST00000465705 RALYLQ86SE5 291 aaKnown RBP13.32□□□□□ -0.28
TMCO1-204ENST00000465705 MARVELD3Q96A59 401 aa13.32□□□□□ -0.28
TMCO1-204ENST00000465705 C12orf42Q96LP6 360 aa13.32□□□□□ -0.28
TMCO1-204ENST00000465705 PARK7Q99497 189 aaKnown RBP13.32□□□□□ -0.28
TMCO1-204ENST00000465705 GOPCQ9HD26 462 aa13.32□□□□□ -0.28
TMCO1-204ENST00000465705 EMILIN3Q9NT22 766 aa13.32□□□□□ -0.28
TMCO1-204ENST00000465705 MTMR4Q9NYA4 1195 aa13.32□□□□□ -0.28
TMCO1-204ENST00000465705 NYAP2Q9P242 653 aa13.32□□□□□ -0.28
TMCO1-204ENST00000465705 STX8Q9UNK0 236 aa13.32□□□□□ -0.28
TMCO1-204ENST00000465705 TMX2Q9Y320 296 aa13.32□□□□□ -0.28
TMCO1-204ENST00000465705 E7EWF7 191 aa13.31□□□□□ -0.28
TMCO1-204ENST00000465705 RAD21O60216 631 aa13.31□□□□□ -0.28
TMCO1-204ENST00000465705 NMT2O60551 498 aa13.31□□□□□ -0.28
TMCO1-204ENST00000465705 EIF5BO60841 1220 aaKnown RBP13.31□□□□□ -0.28
TMCO1-204ENST00000465705 VCAM1P19320 739 aa13.31□□□□□ -0.28
TMCO1-204ENST00000465705 NECTIN1Q15223 517 aa13.31□□□□□ -0.28
TMCO1-204ENST00000465705 TREML2Q5T2D2 321 aa13.31□□□□□ -0.28
TMCO1-204ENST00000465705 GPAT2Q6NUI2 795 aa13.31□□□□□ -0.28
TMCO1-204ENST00000465705 IQCA1Q86XH1 822 aa13.31□□□□□ -0.28
TMCO1-204ENST00000465705 SIAH1Q8IUQ4 282 aa13.31□□□□□ -0.28
TMCO1-204ENST00000465705 NCOA7Q8NI08 942 aa13.31□□□□□ -0.28
TMCO1-204ENST00000465705 LPAR1Q92633 364 aa13.31□□□□□ -0.28
TMCO1-204ENST00000465705 VCPKMTQ9H867 229 aa13.31□□□□□ -0.28
TMCO1-204ENST00000465705 CLIP2Q9UDT6 1046 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms