RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 LIFRP42702 1097 aa9.65□□□□□ -0.86
UBE4B-205ENST00000465408 SP3Q02447 781 aa9.65□□□□□ -0.86
UBE4B-205ENST00000465408 CEBPZQ03701 1054 aaKnown RBP9.65□□□□□ -0.86
UBE4B-205ENST00000465408 CRHR2Q13324 411 aa9.65□□□□□ -0.86
UBE4B-205ENST00000465408 CCDC183Q5T5S1 534 aa9.65□□□□□ -0.86
UBE4B-205ENST00000465408 FAM109BQ6ICB4 259 aaPredicted RBP9.65□□□□□ -0.86
UBE4B-205ENST00000465408 GIMAP6Q6P9H5 292 aa9.65□□□□□ -0.86
UBE4B-205ENST00000465408 LRSAM1Q6UWE0 723 aa9.65□□□□□ -0.86
UBE4B-205ENST00000465408 SGMS1Q86VZ5 419 aa9.65□□□□□ -0.86
UBE4B-205ENST00000465408 SP8Q8IXZ3 490 aa9.65□□□□□ -0.86
UBE4B-205ENST00000465408 ESR2Q92731 530 aa9.65□□□□□ -0.86
UBE4B-205ENST00000465408 DPF2Q92785 391 aa9.65□□□□□ -0.86
UBE4B-205ENST00000465408 PHKBQ93100 1093 aa9.65□□□□□ -0.86
UBE4B-205ENST00000465408 AIFM3Q96NN9 605 aa9.65□□□□□ -0.86
UBE4B-205ENST00000465408 FTOQ9C0B1 505 aaKnown RBP eCLIP9.65□□□□□ -0.86
UBE4B-205ENST00000465408 RBSNQ9H1K0 784 aa9.65□□□□□ -0.86
UBE4B-205ENST00000465408 VPS33BQ9H267 617 aa9.65□□□□□ -0.86
UBE4B-205ENST00000465408 DCP1AQ9NPI6 582 aaPredicted RBP9.65□□□□□ -0.86
UBE4B-205ENST00000465408 FAM217BQ9NTX9 383 aaPredicted RBP9.65□□□□□ -0.86
UBE4B-205ENST00000465408 PODXL2Q9NZ53 605 aa9.65□□□□□ -0.86
UBE4B-205ENST00000465408 HCN4Q9Y3Q4 1203 aa9.65□□□□□ -0.86
UBE4B-205ENST00000465408 SLC12A7Q9Y666 1083 aa9.65□□□□□ -0.86
UBE4B-205ENST00000465408 NCOR1O75376 2440 aa9.64□□□□□ -0.87
UBE4B-205ENST00000465408 TNKSO95271 1327 aa9.64□□□□□ -0.87
UBE4B-205ENST00000465408 DUOX1Q9NRD9 1551 aa9.64□□□□□ -0.87
UBE4B-205ENST00000465408 ERICH2A1L162 156 aa9.64□□□□□ -0.87
UBE4B-205ENST00000465408 RANBP6O60518 1105 aaKnown RBP9.64□□□□□ -0.87
UBE4B-205ENST00000465408 CDKL5O76039 1030 aa9.64□□□□□ -0.87
UBE4B-205ENST00000465408 USP17L8P0C7I0 530 aa9.64□□□□□ -0.87
UBE4B-205ENST00000465408 IL1R1P14778 569 aa9.64□□□□□ -0.87
UBE4B-205ENST00000465408 LIG1P18858 919 aa9.64□□□□□ -0.87
UBE4B-205ENST00000465408 USP5P45974 858 aa9.64□□□□□ -0.87
UBE4B-205ENST00000465408 GSTO1P78417 241 aa9.64□□□□□ -0.87
UBE4B-205ENST00000465408 SART3Q15020 963 aaKnown RBP9.64□□□□□ -0.87
UBE4B-205ENST00000465408 KIF4BQ2VIQ3 1234 aa9.64□□□□□ -0.87
UBE4B-205ENST00000465408 CPLX2Q6PUV4 134 aaKnown RBP9.64□□□□□ -0.87
UBE4B-205ENST00000465408 SYNE3Q6ZMZ3 975 aa9.64□□□□□ -0.87
UBE4B-205ENST00000465408 FBXW7Q969H0 707 aa9.64□□□□□ -0.87
UBE4B-205ENST00000465408 P2RX7Q99572 595 aaKnown RBP9.64□□□□□ -0.87
UBE4B-205ENST00000465408 CDX2Q99626 313 aaPredicted RBP9.64□□□□□ -0.87
UBE4B-205ENST00000465408 UBAC1Q9BSL1 405 aa9.64□□□□□ -0.87
UBE4B-205ENST00000465408 ALG1Q9BT22 464 aa9.64□□□□□ -0.87
UBE4B-205ENST00000465408 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.64□□□□□ -0.87
UBE4B-205ENST00000465408 ATP6V0A2Q9Y487 856 aa9.64□□□□□ -0.87
UBE4B-205ENST00000465408 ZNF646O15015 1829 aaPredicted RBP9.63□□□□□ -0.87
UBE4B-205ENST00000465408 MROH7-TTC4A0A0A0MT08 1334 aa9.63□□□□□ -0.87
UBE4B-205ENST00000465408 ELP1O95163 1332 aa9.63□□□□□ -0.87
UBE4B-205ENST00000465408 LRRC37AA6NMS7 1700 aa9.63□□□□□ -0.87
UBE4B-205ENST00000465408 ALPK3Q96L96 1907 aa9.63□□□□□ -0.87
UBE4B-205ENST00000465408 KIF28PB7ZC32 967 aa9.63□□□□□ -0.87
UBE4B-205ENST00000465408 GJA8P48165 433 aa9.63□□□□□ -0.87
UBE4B-205ENST00000465408 SEC23AQ15436 765 aa9.63□□□□□ -0.87
UBE4B-205ENST00000465408 NTRK3Q16288 839 aa9.63□□□□□ -0.87
UBE4B-205ENST00000465408 RTN1Q16799 776 aa9.63□□□□□ -0.87
UBE4B-205ENST00000465408 FAM47AQ5JRC9 791 aa9.63□□□□□ -0.87
UBE4B-205ENST00000465408 ANGEL2Q5VTE6 544 aaKnown RBP9.63□□□□□ -0.87
UBE4B-205ENST00000465408 PRAMEF18Q5VWM3 479 aa9.63□□□□□ -0.87
UBE4B-205ENST00000465408 SPRYD7Q5W111 196 aa9.63□□□□□ -0.87
UBE4B-205ENST00000465408 TMC4Q7Z404 712 aa9.63□□□□□ -0.87
UBE4B-205ENST00000465408 ZNF654Q8IZM8 581 aa9.63□□□□□ -0.87
UBE4B-205ENST00000465408 NUP133Q8WUM0 1156 aa9.63□□□□□ -0.87
UBE4B-205ENST00000465408 PGBD1Q96JS3 809 aa9.63□□□□□ -0.87
UBE4B-205ENST00000465408 ZNF396Q96N95 335 aaPredicted RBP9.63□□□□□ -0.87
UBE4B-205ENST00000465408 USP28Q96RU2 1077 aa9.63□□□□□ -0.87
UBE4B-205ENST00000465408 ZSCAN10Q96SZ4 725 aaPredicted RBP9.63□□□□□ -0.87
UBE4B-205ENST00000465408 NOL10Q9BSC4 688 aaKnown RBP9.63□□□□□ -0.87
UBE4B-205ENST00000465408 SLC26A6Q9BXS9 759 aa9.63□□□□□ -0.87
UBE4B-205ENST00000465408 RTFDC1Q9BY42 306 aaPredicted RBP9.63□□□□□ -0.87
UBE4B-205ENST00000465408 SCAND2PQ9GZW5 306 aaPredicted RBP9.63□□□□□ -0.87
UBE4B-205ENST00000465408 TSPY26PQ9H489 355 aa9.63□□□□□ -0.87
UBE4B-205ENST00000465408 ATP8A2Q9NTI2 1148 aa9.63□□□□□ -0.87
UBE4B-205ENST00000465408 MCM9Q9NXL9 1143 aa9.63□□□□□ -0.87
UBE4B-205ENST00000465408 ARPP21Q9UBL0 812 aaPredicted RBP9.63□□□□□ -0.87
UBE4B-205ENST00000465408 ZMYND8Q9ULU4 1186 aaPredicted RBP9.63□□□□□ -0.87
UBE4B-205ENST00000465408 SCAF8Q9UPN6 1271 aaKnown RBP9.63□□□□□ -0.87
UBE4B-205ENST00000465408 NID2Q14112 1375 aa9.63□□□□□ -0.87
UBE4B-205ENST00000465408 GOLGA6L4A6NEF3 574 aa9.62□□□□□ -0.87
UBE4B-205ENST00000465408 PSMD14O00487 310 aa9.62□□□□□ -0.87
UBE4B-205ENST00000465408 ORC4O43929 436 aa9.62□□□□□ -0.87
UBE4B-205ENST00000465408 FARP2O94887 1054 aaPredicted RBP9.62□□□□□ -0.87
UBE4B-205ENST00000465408 BAG3O95817 575 aa9.62□□□□□ -0.87
UBE4B-205ENST00000465408 LDHCP07864 332 aa9.62□□□□□ -0.87
UBE4B-205ENST00000465408 BTDP43251 543 aa9.62□□□□□ -0.87
UBE4B-205ENST00000465408 NASPP49321 788 aaPredicted RBP9.62□□□□□ -0.87
UBE4B-205ENST00000465408 GTF2IP78347 998 aa9.62□□□□□ -0.87
UBE4B-205ENST00000465408 SSRP1Q08945 709 aaKnown RBP9.62□□□□□ -0.87
UBE4B-205ENST00000465408 KIAA2012Q0VF49 1180 aa9.62□□□□□ -0.87
UBE4B-205ENST00000465408 DOK7Q18PE1 504 aa9.62□□□□□ -0.87
UBE4B-205ENST00000465408 SBK1Q52WX2 424 aa9.62□□□□□ -0.87
UBE4B-205ENST00000465408 MFSD14BQ5SR56 506 aa9.62□□□□□ -0.87
UBE4B-205ENST00000465408 TMED8Q6PL24 325 aaPredicted RBP9.62□□□□□ -0.87
UBE4B-205ENST00000465408 DPP8Q6V1X1 898 aaPredicted RBP9.62□□□□□ -0.87
UBE4B-205ENST00000465408 MAPKAPK5Q8IW41 473 aa9.62□□□□□ -0.87
UBE4B-205ENST00000465408 CMTR1Q8N1G2 835 aaKnown RBP9.62□□□□□ -0.87
UBE4B-205ENST00000465408 ENAHQ8N8S7 591 aaPredicted RBP9.62□□□□□ -0.87
UBE4B-205ENST00000465408 RNF214Q8ND24 703 aa9.62□□□□□ -0.87
UBE4B-205ENST00000465408 FBXO18Q8NFZ0 1043 aa9.62□□□□□ -0.87
UBE4B-205ENST00000465408 BICD2Q8TD16 824 aa9.62□□□□□ -0.87
UBE4B-205ENST00000465408 TGFBRAP1Q8WUH2 860 aa9.62□□□□□ -0.87
UBE4B-205ENST00000465408 MTA3Q9BTC8 594 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms