RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 MBD4O95243 580 aa27.48■■□□□ 1.99
USP42-205ENST00000465073 ATP2B2Q01814 1243 aa27.48■■□□□ 1.99
USP42-205ENST00000465073 SLC44A5Q8NCS7 719 aa27.48■■□□□ 1.99
USP42-205ENST00000465073 SZT2Q5T011 3432 aa27.48■■□□□ 1.99
USP42-205ENST00000465073 DYNLL2Q96FJ2 89 aa27.47■■□□□ 1.99
USP42-205ENST00000465073 TANGO6Q9C0B7 1094 aa27.47■■□□□ 1.99
USP42-205ENST00000465073 FLRT1Q9NZU1 646 aa27.47■■□□□ 1.99
USP42-205ENST00000465073 RCAN3Q9UKA8 241 aa27.47■■□□□ 1.99
USP42-205ENST00000465073 PRKAB2O43741 272 aa27.46■■□□□ 1.99
USP42-205ENST00000465073 LPAR1Q92633 364 aa27.46■■□□□ 1.99
USP42-205ENST00000465073 STRNO43815 780 aa27.45■■□□□ 1.99
USP42-205ENST00000465073 UBE3CQ15386 1083 aa27.45■■□□□ 1.99
USP42-205ENST00000465073 SLFNL1Q499Z3 407 aa27.45■■□□□ 1.99
USP42-205ENST00000465073 AMOTL1Q8IY63 956 aa27.45■■□□□ 1.99
USP42-205ENST00000465073 CCDC17Q96LX7 622 aa27.45■■□□□ 1.99
USP42-205ENST00000465073 SH2D4AQ9H788 454 aa27.45■■□□□ 1.99
USP42-205ENST00000465073 ARHGEF10LQ9HCE6 1279 aa27.45■■□□□ 1.99
USP42-205ENST00000465073 MSCO60682 206 aa27.44■■□□□ 1.98
USP42-205ENST00000465073 MB21D1Q8N884 522 aa27.44■■□□□ 1.98
USP42-205ENST00000465073 SHCBP1Q8NEM2 672 aa27.44■■□□□ 1.98
USP42-205ENST00000465073 NPLOC4Q8TAT6 608 aa27.44■■□□□ 1.98
USP42-205ENST00000465073 DDRGK1Q96HY6 314 aa27.44■■□□□ 1.98
USP42-205ENST00000465073 MOV10L1Q9BXT6 1211 aaKnown RBP27.44■■□□□ 1.98
USP42-205ENST00000465073 SYN1P17600 705 aa27.44■■□□□ 1.98
USP42-205ENST00000465073 C12orf60Q5U649 245 aa27.44■■□□□ 1.98
USP42-205ENST00000465073 SIAH1Q8IUQ4 282 aa27.44■■□□□ 1.98
USP42-205ENST00000465073 LRRCC1Q9C099 1032 aa27.44■■□□□ 1.98
USP42-205ENST00000465073 SPATC1LQ9H0A9 340 aa27.44■■□□□ 1.98
USP42-205ENST00000465073 TMX2Q9Y320 296 aa27.44■■□□□ 1.98
USP42-205ENST00000465073 SOX1O00570 391 aaPredicted RBP27.43■■□□□ 1.98
USP42-205ENST00000465073 AKR1B1P15121 316 aa27.43■■□□□ 1.98
USP42-205ENST00000465073 ICA1Q05084 483 aa27.43■■□□□ 1.98
USP42-205ENST00000465073 KIAA1755Q5JYT7 1200 aa27.43■■□□□ 1.98
USP42-205ENST00000465073 DPP9Q86TI2 863 aa27.43■■□□□ 1.98
USP42-205ENST00000465073 DDX20Q9UHI6 824 aaKnown RBP27.43■■□□□ 1.98
USP42-205ENST00000465073 USP17L12C9JPN9 530 aa27.42■■□□□ 1.98
USP42-205ENST00000465073 USP17L21D6R901 530 aa27.42■■□□□ 1.98
USP42-205ENST00000465073 IGHA2P01877 340 aa27.42■■□□□ 1.98
USP42-205ENST00000465073 DSG3P32926 999 aa27.42■■□□□ 1.98
USP42-205ENST00000465073 MAGEA10P43363 369 aaPredicted RBP27.42■■□□□ 1.98
USP42-205ENST00000465073 CDK8P49336 464 aa27.42■■□□□ 1.98
USP42-205ENST00000465073 ZSCAN25Q6NSZ9 544 aa27.42■■□□□ 1.98
USP42-205ENST00000465073 CNGA1P29973 690 aa27.41■■□□□ 1.98
USP42-205ENST00000465073 CYP2C19P33261 490 aa27.41■■□□□ 1.98
USP42-205ENST00000465073 LRRC26Q2I0M4 334 aa27.41■■□□□ 1.98
USP42-205ENST00000465073 VCPKMTQ9H867 229 aa27.41■■□□□ 1.98
USP42-205ENST00000465073 ERCC3P19447 782 aa27.4■■□□□ 1.98
USP42-205ENST00000465073 ADORA2AP29274 412 aa27.4■■□□□ 1.98
USP42-205ENST00000465073 OLFML2BQ68BL8 750 aa27.4■■□□□ 1.98
USP42-205ENST00000465073 C16orf86Q6ZW13 317 aa27.4■■□□□ 1.98
USP42-205ENST00000465073 LRCH3Q96II8 777 aa27.4■■□□□ 1.98
USP42-205ENST00000465073 MROH8Q9H579 483 aa27.4■■□□□ 1.98
USP42-205ENST00000465073 SLC4A4Q9Y6R1 1079 aa27.4■■□□□ 1.98
USP42-205ENST00000465073 CYP2D7A0A087X1C5 515 aa27.39■■□□□ 1.98
USP42-205ENST00000465073 FLOT1O75955 427 aa27.39■■□□□ 1.98
USP42-205ENST00000465073 CLEC10AQ8IUN9 316 aa27.39■■□□□ 1.98
USP42-205ENST00000465073 SPICE1Q8N0Z3 855 aa27.39■■□□□ 1.98
USP42-205ENST00000465073 WDR46O15213 610 aaKnown RBP27.38■■□□□ 1.97
USP42-205ENST00000465073 CHGBP05060 677 aa27.38■■□□□ 1.97
USP42-205ENST00000465073 SLC5A4Q9NY91 659 aa27.38■■□□□ 1.97
USP42-205ENST00000465073 CYBAP13498 195 aa27.38■■□□□ 1.97
USP42-205ENST00000465073 PLS1Q14651 629 aa27.38■■□□□ 1.97
USP42-205ENST00000465073 ABRAQ8N0Z2 381 aa27.38■■□□□ 1.97
USP42-205ENST00000465073 TRPV1Q8NER1 839 aa27.38■■□□□ 1.97
USP42-205ENST00000465073 ATG4CQ96DT6 458 aa27.38■■□□□ 1.97
USP42-205ENST00000465073 KANSL2Q9H9L4 492 aa27.38■■□□□ 1.97
USP42-205ENST00000465073 SMIM22K7EJ46 135 aa27.37■■□□□ 1.97
USP42-205ENST00000465073 C20orf194Q5TEA3 1177 aa27.37■■□□□ 1.97
USP42-205ENST00000465073 GPR153Q6NV75 609 aa27.37■■□□□ 1.97
USP42-205ENST00000465073 CTR9Q6PD62 1173 aa27.37■■□□□ 1.97
USP42-205ENST00000465073 TDHQ8IZJ6 230 aa27.37■■□□□ 1.97
USP42-205ENST00000465073 UBE2OQ9C0C9 1292 aaKnown RBP27.37■■□□□ 1.97
USP42-205ENST00000465073 SENP6Q9GZR1 1112 aaPredicted RBP27.37■■□□□ 1.97
USP42-205ENST00000465073 PUS7LQ9H0K6 701 aaKnown RBP27.37■■□□□ 1.97
USP42-205ENST00000465073 LAMA3Q16787 3333 aa27.36■■□□□ 1.97
USP42-205ENST00000465073 DNM1LO00429 736 aa27.36■■□□□ 1.97
USP42-205ENST00000465073 SMARCA5O60264 1052 aaPredicted RBP27.36■■□□□ 1.97
USP42-205ENST00000465073 COBLO75128 1261 aa27.36■■□□□ 1.97
USP42-205ENST00000465073 LRIT3Q3SXY7 679 aa27.36■■□□□ 1.97
USP42-205ENST00000465073 NCAPG2Q86XI2 1143 aa27.36■■□□□ 1.97
USP42-205ENST00000465073 ECHDC1Q9NTX5 307 aa27.36■■□□□ 1.97
USP42-205ENST00000465073 EEF2P13639 858 aaKnown RBP27.35■■□□□ 1.97
USP42-205ENST00000465073 RLFQ13129 1914 aa27.35■■□□□ 1.97
USP42-205ENST00000465073 ZNF236Q9UL36 1845 aa27.34■■□□□ 1.97
USP42-205ENST00000465073 SLC25A27O95847 323 aa27.34■■□□□ 1.97
USP42-205ENST00000465073 ARRDC4Q8NCT1 418 aa27.34■■□□□ 1.97
USP42-205ENST00000465073 ARPP21Q9UBL0 812 aaPredicted RBP27.34■■□□□ 1.97
USP42-205ENST00000465073 ADAMTS5Q9UNA0 930 aa27.34■■□□□ 1.97
USP42-205ENST00000465073 BAZ2AQ9UIF9 1905 aaKnown RBP27.34■■□□□ 1.97
USP42-205ENST00000465073 A0A0G2JMZ2 1700 aa27.33■■□□□ 1.97
USP42-205ENST00000465073 FCER1AP12319 257 aa27.33■■□□□ 1.97
USP42-205ENST00000465073 TMEM132BQ14DG7 1078 aa27.33■■□□□ 1.97
USP42-205ENST00000465073 SAMD1Q6SPF0 538 aaPredicted RBP27.33■■□□□ 1.97
USP42-205ENST00000465073 STRBPQ96SI9 672 aaKnown RBP27.33■■□□□ 1.97
USP42-205ENST00000465073 GOPCQ9HD26 462 aa27.33■■□□□ 1.97
USP42-205ENST00000465073 MYH8P13535 1937 aa27.32■■□□□ 1.96
USP42-205ENST00000465073 SEPT4O43236 478 aa27.32■■□□□ 1.96
USP42-205ENST00000465073 SBK1Q52WX2 424 aa27.32■■□□□ 1.96
USP42-205ENST00000465073 GIMAP6Q6P9H5 292 aa27.31■■□□□ 1.96
USP42-205ENST00000465073 GPATCH3Q96I76 525 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms