RNA–Protein interactions for RNA: ENST00000465057.5

CMTM1-207, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-207ENST00000465057 XAGE3Q8WTP9 111 aa7.06□□□□□ -1.28
CMTM1-207ENST00000465057 JDP2Q8WYK2 163 aa7.06□□□□□ -1.28
CMTM1-207ENST00000465057 RBM17Q96I25 401 aaKnown RBP7.06□□□□□ -1.28
CMTM1-207ENST00000465057 SUV39H2Q9H5I1 410 aa7.06□□□□□ -1.28
CMTM1-207ENST00000465057 EFCC1Q9HA90 598 aa7.06□□□□□ -1.28
CMTM1-207ENST00000465057 CNTNAP1P78357 1384 aa7.06□□□□□ -1.28
CMTM1-207ENST00000465057 POLR2AP24928 1970 aaKnown RBP7.06□□□□□ -1.28
CMTM1-207ENST00000465057 RRP9O43818 475 aaKnown RBP7.05□□□□□ -1.28
CMTM1-207ENST00000465057 PRMT3O60678 531 aa7.05□□□□□ -1.28
CMTM1-207ENST00000465057 IGHA1P01876 353 aa7.05□□□□□ -1.28
CMTM1-207ENST00000465057 HCLS1P14317 486 aaPredicted RBP7.05□□□□□ -1.28
CMTM1-207ENST00000465057 HSP90B1P14625 803 aaKnown RBP7.05□□□□□ -1.28
CMTM1-207ENST00000465057 COL8A1P27658 744 aa7.05□□□□□ -1.28
CMTM1-207ENST00000465057 HOXA10P31260 410 aaPredicted RBP7.05□□□□□ -1.28
CMTM1-207ENST00000465057 FMR1Q06787 632 aaKnown RBP eCLIP7.05□□□□□ -1.28
CMTM1-207ENST00000465057 AOC3Q16853 763 aa7.05□□□□□ -1.28
CMTM1-207ENST00000465057 PARP10Q53GL7 1025 aa7.05□□□□□ -1.28
CMTM1-207ENST00000465057 TMEM164Q5U3C3 297 aa7.05□□□□□ -1.28
CMTM1-207ENST00000465057 NLRP10Q86W26 655 aa7.05□□□□□ -1.28
CMTM1-207ENST00000465057 GPC2Q8N158 579 aa7.05□□□□□ -1.28
CMTM1-207ENST00000465057 BHMTQ93088 406 aa7.05□□□□□ -1.28
CMTM1-207ENST00000465057 CRAMP1Q96RY5 1269 aa7.05□□□□□ -1.28
CMTM1-207ENST00000465057 UTP14AQ9BVJ6 771 aaKnown RBP7.05□□□□□ -1.28
CMTM1-207ENST00000465057 GSX2Q9BZM3 304 aa7.05□□□□□ -1.28
CMTM1-207ENST00000465057 VPS33BQ9H267 617 aa7.05□□□□□ -1.28
CMTM1-207ENST00000465057 PRKRIP1Q9H875 184 aaPredicted RBP7.05□□□□□ -1.28
CMTM1-207ENST00000465057 CHPF2Q9P2E5 772 aa7.05□□□□□ -1.28
CMTM1-207ENST00000465057 LRFN2Q9ULH4 789 aa7.05□□□□□ -1.28
CMTM1-207ENST00000465057 SCN9AQ15858 1988 aa7.05□□□□□ -1.28
CMTM1-207ENST00000465057 PSME4Q14997 1843 aa7.05□□□□□ -1.28
CMTM1-207ENST00000465057 TMEM88BA6NKF7 163 aa7.04□□□□□ -1.28
CMTM1-207ENST00000465057 PPIP5K2O43314 1243 aa7.04□□□□□ -1.28
CMTM1-207ENST00000465057 MICAL2O94851 1124 aa7.04□□□□□ -1.28
CMTM1-207ENST00000465057 EPB42P16452 691 aa7.04□□□□□ -1.28
CMTM1-207ENST00000465057 INPP5BP32019 993 aa7.04□□□□□ -1.28
CMTM1-207ENST00000465057 EPS15P42566 896 aa7.04□□□□□ -1.28
CMTM1-207ENST00000465057 IDH3AP50213 366 aa7.04□□□□□ -1.28
CMTM1-207ENST00000465057 EIF6P56537 245 aaKnown RBP7.04□□□□□ -1.28
CMTM1-207ENST00000465057 HSP90AA2PQ14568 343 aaPredicted RBP7.04□□□□□ -1.28
CMTM1-207ENST00000465057 WDR43Q15061 677 aaKnown RBP eCLIP7.04□□□□□ -1.28
CMTM1-207ENST00000465057 PLA2G4EQ3MJ16 856 aa7.04□□□□□ -1.28
CMTM1-207ENST00000465057 GPAT2Q6NUI2 795 aa7.04□□□□□ -1.28
CMTM1-207ENST00000465057 RUNDC1Q96C34 613 aa7.04□□□□□ -1.28
CMTM1-207ENST00000465057 DDX21Q9NR30 783 aaKnown RBP eCLIP7.04□□□□□ -1.28
CMTM1-207ENST00000465057 CHL1O00533 1208 aa7.03□□□□□ -1.28
CMTM1-207ENST00000465057 FOXN1O15353 648 aa7.03□□□□□ -1.28
CMTM1-207ENST00000465057 ITGB2P05107 769 aa7.03□□□□□ -1.28
CMTM1-207ENST00000465057 GRNP28799 593 aaKnown RBP7.03□□□□□ -1.28
CMTM1-207ENST00000465057 ADH7P40394 386 aa7.03□□□□□ -1.28
CMTM1-207ENST00000465057 TCIRG1Q13488 830 aa7.03□□□□□ -1.28
CMTM1-207ENST00000465057 CCINQ13939 588 aa7.03□□□□□ -1.28
CMTM1-207ENST00000465057 BECN1Q14457 450 aa7.03□□□□□ -1.28
CMTM1-207ENST00000465057 NFKBIBQ15653 356 aa7.03□□□□□ -1.28
CMTM1-207ENST00000465057 HSP90AB3PQ58FF7 597 aa7.03□□□□□ -1.28
CMTM1-207ENST00000465057 SLC10A5Q5PT55 438 aa7.03□□□□□ -1.28
CMTM1-207ENST00000465057 PNMA8AQ86V59 439 aaPredicted RBP7.03□□□□□ -1.28
CMTM1-207ENST00000465057 NIM1KQ8IY84 436 aa7.03□□□□□ -1.28
CMTM1-207ENST00000465057 CNTROBQ8N137 903 aa7.03□□□□□ -1.28
CMTM1-207ENST00000465057 COL26A1Q96A83 441 aa7.03□□□□□ -1.28
CMTM1-207ENST00000465057 NAP1L5Q96NT1 182 aaPredicted RBP7.03□□□□□ -1.28
CMTM1-207ENST00000465057 BACH2Q9BYV9 841 aa7.03□□□□□ -1.28
CMTM1-207ENST00000465057 C11orf16Q9NQ32 467 aa7.03□□□□□ -1.28
CMTM1-207ENST00000465057 NOP53Q9NZM5 478 aaKnown RBP7.03□□□□□ -1.28
CMTM1-207ENST00000465057 TRMT112Q9UI30 125 aaKnown RBP7.03□□□□□ -1.28
CMTM1-207ENST00000465057 BRPF3Q9ULD4 1205 aa7.03□□□□□ -1.28
CMTM1-207ENST00000465057 ATP6V0A2Q9Y487 856 aa7.03□□□□□ -1.28
CMTM1-207ENST00000465057 ZNF646O15015 1829 aaPredicted RBP7.03□□□□□ -1.28
CMTM1-207ENST00000465057 SH3TC1Q8TE82 1336 aa7.02□□□□□ -1.28
CMTM1-207ENST00000465057 KRBA1A5PL33 1030 aa7.02□□□□□ -1.29
CMTM1-207ENST00000465057 ARSDP51689 593 aa7.02□□□□□ -1.29
CMTM1-207ENST00000465057 GRAPQ13588 217 aa7.02□□□□□ -1.29
CMTM1-207ENST00000465057 COX20Q5RI15 118 aa7.02□□□□□ -1.29
CMTM1-207ENST00000465057 DPP8Q6V1X1 898 aaPredicted RBP7.02□□□□□ -1.29
CMTM1-207ENST00000465057 GRAPLQ8TC17 118 aaPredicted RBP7.02□□□□□ -1.29
CMTM1-207ENST00000465057 CLP1Q92989 425 aaKnown RBP7.02□□□□□ -1.29
CMTM1-207ENST00000465057 IFT43Q96FT9 208 aa7.02□□□□□ -1.29
CMTM1-207ENST00000465057 CXXC1Q9P0U4 656 aaPredicted RBP7.02□□□□□ -1.29
CMTM1-207ENST00000465057 STARD13Q9Y3M8 1113 aa7.02□□□□□ -1.29
CMTM1-207ENST00000465057 A0A1B0GUL6 1792 aa7.02□□□□□ -1.29
CMTM1-207ENST00000465057 SHTN1A0MZ66 631 aa7.01□□□□□ -1.29
CMTM1-207ENST00000465057 RASSF10A6NK89 507 aa7.01□□□□□ -1.29
CMTM1-207ENST00000465057 YDJCA8MPS7 323 aa7.01□□□□□ -1.29
CMTM1-207ENST00000465057 TRAF5O00463 557 aa7.01□□□□□ -1.29
CMTM1-207ENST00000465057 ELL2O00472 640 aaPredicted RBP7.01□□□□□ -1.29
CMTM1-207ENST00000465057 APAF1O14727 1248 aa7.01□□□□□ -1.29
CMTM1-207ENST00000465057 GMPSP49915 693 aaPredicted RBP7.01□□□□□ -1.29
CMTM1-207ENST00000465057 CXCL9Q07325 125 aa7.01□□□□□ -1.29
CMTM1-207ENST00000465057 KIAA2012Q0VF49 1180 aa7.01□□□□□ -1.29
CMTM1-207ENST00000465057 GRM1Q13255 1194 aa7.01□□□□□ -1.29
CMTM1-207ENST00000465057 DUSP27Q5VZP5 1158 aa7.01□□□□□ -1.29
CMTM1-207ENST00000465057 DDX46Q7L014 1031 aaKnown RBP7.01□□□□□ -1.29
CMTM1-207ENST00000465057 TMC4Q7Z404 712 aa7.01□□□□□ -1.29
CMTM1-207ENST00000465057 MICALL1Q8N3F8 863 aa7.01□□□□□ -1.29
CMTM1-207ENST00000465057 PLBD2Q8NHP8 589 aa7.01□□□□□ -1.29
CMTM1-207ENST00000465057 FRAT1Q92837 279 aaPredicted RBP7.01□□□□□ -1.29
CMTM1-207ENST00000465057 CELF1Q92879 486 aaKnown RBP7.01□□□□□ -1.29
CMTM1-207ENST00000465057 TRIM11Q96F44 468 aa7.01□□□□□ -1.29
CMTM1-207ENST00000465057 FAM89AQ96GI7 184 aa7.01□□□□□ -1.29
CMTM1-207ENST00000465057 PNMA5Q96PV4 448 aa7.01□□□□□ -1.29
CMTM1-207ENST00000465057 TMX4Q9H1E5 349 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms