RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 SEPT2Q15019 361 aa17.75■□□□□ 0.43
MCF2L-220ENST00000464800 FTSJ3Q8IY81 847 aaKnown RBP17.75■□□□□ 0.43
MCF2L-220ENST00000464800 MOV10L1Q9BXT6 1211 aaKnown RBP17.75■□□□□ 0.43
MCF2L-220ENST00000464800 UNC80Q8N2C7 3258 aa17.74■□□□□ 0.43
MCF2L-220ENST00000464800 MAGEB6P1A0A0J9YX57 407 aa17.74■□□□□ 0.43
MCF2L-220ENST00000464800 MPHOSPH10O00566 681 aaKnown RBP17.74■□□□□ 0.43
MCF2L-220ENST00000464800 COG2Q14746 738 aa17.74■□□□□ 0.43
MCF2L-220ENST00000464800 ITPRIPQ8IWB1 547 aa17.74■□□□□ 0.43
MCF2L-220ENST00000464800 SHCBP1Q8NEM2 672 aa17.74■□□□□ 0.43
MCF2L-220ENST00000464800 RIOK1Q9BRS2 568 aaKnown RBP17.74■□□□□ 0.43
MCF2L-220ENST00000464800 SPATC1LQ9H0A9 340 aa17.74■□□□□ 0.43
MCF2L-220ENST00000464800 PRDM5Q9NQX1 630 aaPredicted RBP17.74■□□□□ 0.43
MCF2L-220ENST00000464800 HOXC10Q9NYD6 342 aa17.74■□□□□ 0.43
MCF2L-220ENST00000464800 COL11A1P12107 1806 aaPredicted RBP17.73■□□□□ 0.43
MCF2L-220ENST00000464800 GABPAQ06546 454 aa17.73■□□□□ 0.43
MCF2L-220ENST00000464800 SLC39A5Q6ZMH5 540 aa17.73■□□□□ 0.43
MCF2L-220ENST00000464800 AACSQ86V21 672 aa17.73■□□□□ 0.43
MCF2L-220ENST00000464800 CRNKL1Q9BZJ0 848 aaKnown RBP17.73■□□□□ 0.43
MCF2L-220ENST00000464800 SLC5A4Q9NY91 659 aa17.73■□□□□ 0.43
MCF2L-220ENST00000464800 ZNFX1Q9P2E3 1918 aaKnown RBP17.72■□□□□ 0.43
MCF2L-220ENST00000464800 A0A1W2PRG0 241 aa17.72■□□□□ 0.43
MCF2L-220ENST00000464800 SEPT4O43236 478 aa17.72■□□□□ 0.43
MCF2L-220ENST00000464800 MYCNP04198 464 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-220ENST00000464800 ERCC3P19447 782 aa17.72■□□□□ 0.43
MCF2L-220ENST00000464800 TTF1Q15361 905 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-220ENST00000464800 ANO1Q5XXA6 986 aa17.72■□□□□ 0.43
MCF2L-220ENST00000464800 ERC1Q8IUD2 1116 aa17.72■□□□□ 0.43
MCF2L-220ENST00000464800 MB21D1Q8N884 522 aa17.72■□□□□ 0.43
MCF2L-220ENST00000464800 MCM9Q9NXL9 1143 aa17.72■□□□□ 0.43
MCF2L-220ENST00000464800 PLXNA1Q9UIW2 1896 aa17.71■□□□□ 0.43
MCF2L-220ENST00000464800 PLS1Q14651 629 aa17.71■□□□□ 0.43
MCF2L-220ENST00000464800 SNX17Q15036 470 aa17.71■□□□□ 0.43
MCF2L-220ENST00000464800 SHHQ15465 462 aa17.71■□□□□ 0.43
MCF2L-220ENST00000464800 TRIM60Q495X7 471 aa17.71■□□□□ 0.43
MCF2L-220ENST00000464800 MROH8Q9H579 483 aa17.71■□□□□ 0.43
MCF2L-220ENST00000464800 BAZ2AQ9UIF9 1905 aaKnown RBP17.7■□□□□ 0.42
MCF2L-220ENST00000464800 COBLO75128 1261 aa17.7■□□□□ 0.42
MCF2L-220ENST00000464800 PDE6AP16499 860 aa17.7■□□□□ 0.42
MCF2L-220ENST00000464800 EVX2Q03828 476 aa17.7■□□□□ 0.42
MCF2L-220ENST00000464800 C9orf50Q5SZB4 431 aa17.7■□□□□ 0.42
MCF2L-220ENST00000464800 SLC9C2Q5TAH2 1124 aa17.7■□□□□ 0.42
MCF2L-220ENST00000464800 TMEM179Q6ZVK1 233 aa17.7■□□□□ 0.42
MCF2L-220ENST00000464800 NCAPG2Q86XI2 1143 aa17.7■□□□□ 0.42
MCF2L-220ENST00000464800 ABRAQ8N0Z2 381 aa17.7■□□□□ 0.42
MCF2L-220ENST00000464800 BADQ92934 168 aa17.7■□□□□ 0.42
MCF2L-220ENST00000464800 CDX2Q99626 313 aaPredicted RBP17.7■□□□□ 0.42
MCF2L-220ENST00000464800 PDLIM7Q9NR12 457 aa17.7■□□□□ 0.42
MCF2L-220ENST00000464800 EXOC6BQ9Y2D4 811 aa17.7■□□□□ 0.42
MCF2L-220ENST00000464800 LAMA2P24043 3122 aaKnown RBP17.69■□□□□ 0.42
MCF2L-220ENST00000464800 FLOT1O75955 427 aa17.69■□□□□ 0.42
MCF2L-220ENST00000464800 ADCYAP1R1P41586 468 aa17.69■□□□□ 0.42
MCF2L-220ENST00000464800 LRRC41Q15345 812 aa17.69■□□□□ 0.42
MCF2L-220ENST00000464800 CEP85Q6P2H3 762 aa17.69■□□□□ 0.42
MCF2L-220ENST00000464800 MAFAQ8NHW3 353 aaPredicted RBP17.69■□□□□ 0.42
MCF2L-220ENST00000464800 ARHGEF10LQ9HCE6 1279 aa17.69■□□□□ 0.42
MCF2L-220ENST00000464800 SWAP70Q9UH65 585 aa17.69■□□□□ 0.42
MCF2L-220ENST00000464800 RLBP1P12271 317 aa17.68■□□□□ 0.42
MCF2L-220ENST00000464800 DSG3P32926 999 aa17.68■□□□□ 0.42
MCF2L-220ENST00000464800 SMAD3P84022 425 aaKnown RBP17.68■□□□□ 0.42
MCF2L-220ENST00000464800 FAM47AQ5JRC9 791 aa17.68■□□□□ 0.42
MCF2L-220ENST00000464800 KIAA1755Q5JYT7 1200 aa17.68■□□□□ 0.42
MCF2L-220ENST00000464800 PRAMEF19Q5SWL8 479 aa17.68■□□□□ 0.42
MCF2L-220ENST00000464800 C1orf53Q5VUE5 145 aa17.68■□□□□ 0.42
MCF2L-220ENST00000464800 SLC44A5Q8NCS7 719 aa17.68■□□□□ 0.42
MCF2L-220ENST00000464800 SDR42E1Q8WUS8 393 aa17.68■□□□□ 0.42
MCF2L-220ENST00000464800 FERMT2Q96AC1 680 aa17.68■□□□□ 0.42
MCF2L-220ENST00000464800 ATG4CQ96DT6 458 aa17.68■□□□□ 0.42
MCF2L-220ENST00000464800 MAML3Q96JK9 1138 aa17.68■□□□□ 0.42
MCF2L-220ENST00000464800 SH2D4AQ9H788 454 aa17.68■□□□□ 0.42
MCF2L-220ENST00000464800 DCP1AQ9NPI6 582 aaPredicted RBP17.68■□□□□ 0.42
MCF2L-220ENST00000464800 ZNF532Q9HCE3 1301 aa17.68■□□□□ 0.42
MCF2L-220ENST00000464800 MYH7P12883 1935 aa17.67■□□□□ 0.42
MCF2L-220ENST00000464800 FCER1AP12319 257 aa17.67■□□□□ 0.42
MCF2L-220ENST00000464800 ICA1Q05084 483 aa17.67■□□□□ 0.42
MCF2L-220ENST00000464800 SPICE1Q8N0Z3 855 aa17.67■□□□□ 0.42
MCF2L-220ENST00000464800 SEMA6BQ9H3T3 888 aa17.67■□□□□ 0.42
MCF2L-220ENST00000464800 SMCHD1A6NHR9 2005 aa17.67■□□□□ 0.42
MCF2L-220ENST00000464800 TRIM43BA6NCK2 446 aa17.66■□□□□ 0.42
MCF2L-220ENST00000464800 CYP2D6P10635 497 aa17.66■□□□□ 0.42
MCF2L-220ENST00000464800 HSP90AB4PQ58FF6 505 aa17.66■□□□□ 0.42
MCF2L-220ENST00000464800 SAMD1Q6SPF0 538 aaPredicted RBP17.66■□□□□ 0.42
MCF2L-220ENST00000464800 SH3RF1Q7Z6J0 888 aa17.66■□□□□ 0.42
MCF2L-220ENST00000464800 CLEC10AQ8IUN9 316 aa17.66■□□□□ 0.42
MCF2L-220ENST00000464800 LCORLQ8N3X6 602 aa17.66■□□□□ 0.42
MCF2L-220ENST00000464800 TRIM43Q96BQ3 446 aaPredicted RBP17.66■□□□□ 0.42
MCF2L-220ENST00000464800 DNAJC2Q99543 621 aaKnown RBP17.66■□□□□ 0.42
MCF2L-220ENST00000464800 VCPKMTQ9H867 229 aa17.66■□□□□ 0.42
MCF2L-220ENST00000464800 IL1RAPL2Q9NP60 686 aa17.66■□□□□ 0.42
MCF2L-220ENST00000464800 XPNPEP3Q9NQH7 507 aa17.66■□□□□ 0.42
MCF2L-220ENST00000464800 NRBP1Q9UHY1 535 aa17.66■□□□□ 0.42
MCF2L-220ENST00000464800 PHF24Q9UPV7 400 aa17.66■□□□□ 0.42
MCF2L-220ENST00000464800 TMX2Q9Y320 296 aa17.66■□□□□ 0.42
MCF2L-220ENST00000464800 ROBO3Q96MS0 1386 aa17.66■□□□□ 0.42
MCF2L-220ENST00000464800 GOLIM4O00461 696 aa17.65■□□□□ 0.42
MCF2L-220ENST00000464800 WDR46O15213 610 aaKnown RBP17.65■□□□□ 0.42
MCF2L-220ENST00000464800 SLC25A27O95847 323 aa17.65■□□□□ 0.42
MCF2L-220ENST00000464800 RARBP10826 455 aa17.65■□□□□ 0.42
MCF2L-220ENST00000464800 AKR1B1P15121 316 aa17.65■□□□□ 0.42
MCF2L-220ENST00000464800 TLE2Q04725 743 aa17.65■□□□□ 0.42
MCF2L-220ENST00000464800 DYNLL2Q96FJ2 89 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms