RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 ZNF503-AS2A6NEH8 195 aa7.69□□□□□ -1.18
CD46-211ENST00000464082 MPSTP25325 297 aa7.69□□□□□ -1.18
CD46-211ENST00000464082 MEX3CQ5U5Q3 659 aaKnown RBP7.69□□□□□ -1.18
CD46-211ENST00000464082 ZNF772Q68DY9 489 aaPredicted RBP7.69□□□□□ -1.18
CD46-211ENST00000464082 KRT28Q7Z3Y7 464 aa7.69□□□□□ -1.18
CD46-211ENST00000464082 BHLHE22Q8NFJ8 381 aaPredicted RBP7.69□□□□□ -1.18
CD46-211ENST00000464082 SNX29Q8TEQ0 813 aa7.69□□□□□ -1.18
CD46-211ENST00000464082 C8orf37Q96NL8 207 aa7.69□□□□□ -1.18
CD46-211ENST00000464082 CLEC4MQ9H2X3 399 aaPredicted RBP7.69□□□□□ -1.18
CD46-211ENST00000464082 CRIM1Q9NZV1 1036 aa7.69□□□□□ -1.18
CD46-211ENST00000464082 GPRASP1Q5JY77 1395 aa7.69□□□□□ -1.18
CD46-211ENST00000464082 COL14A1Q05707 1796 aaKnown RBP7.69□□□□□ -1.18
CD46-211ENST00000464082 RGPD5Q99666 1765 aa7.69□□□□□ -1.18
CD46-211ENST00000464082 PIK3C2AO00443 1686 aa7.68□□□□□ -1.18
CD46-211ENST00000464082 PRRG2O14669 202 aa7.68□□□□□ -1.18
CD46-211ENST00000464082 EIF4EBP3O60516 100 aaPredicted RBP7.68□□□□□ -1.18
CD46-211ENST00000464082 AOC2O75106 756 aa7.68□□□□□ -1.18
CD46-211ENST00000464082 POLR3DP05423 398 aaPredicted RBP7.68□□□□□ -1.18
CD46-211ENST00000464082 RAP1GAPP47736 663 aa7.68□□□□□ -1.18
CD46-211ENST00000464082 GRIA4P48058 902 aa7.68□□□□□ -1.18
CD46-211ENST00000464082 TRIM26Q12899 539 aaPredicted RBP7.68□□□□□ -1.18
CD46-211ENST00000464082 MLANAQ16655 118 aa7.68□□□□□ -1.18
CD46-211ENST00000464082 AOC3Q16853 763 aa7.68□□□□□ -1.18
CD46-211ENST00000464082 PMFBP1Q8TBY8 1022 aa7.68□□□□□ -1.18
CD46-211ENST00000464082 WDR18Q9BV38 432 aa7.68□□□□□ -1.18
CD46-211ENST00000464082 PRDM7Q9NQW5 492 aa7.68□□□□□ -1.18
CD46-211ENST00000464082 NCANO14594 1321 aa7.68□□□□□ -1.18
CD46-211ENST00000464082 POLR3AO14802 1390 aaPredicted RBP7.68□□□□□ -1.18
CD46-211ENST00000464082 EIF3AQ14152 1382 aaKnown RBP7.68□□□□□ -1.18
CD46-211ENST00000464082 RALGAPBQ86X10 1494 aa7.68□□□□□ -1.18
CD46-211ENST00000464082 LMO7Q8WWI1 1683 aa7.67□□□□□ -1.18
CD46-211ENST00000464082 ATP2B4P23634 1241 aa7.67□□□□□ -1.18
CD46-211ENST00000464082 CORO1BQ9BR76 489 aa7.67□□□□□ -1.18
CD46-211ENST00000464082 KRTAP9-3Q9BYQ3 159 aa7.67□□□□□ -1.18
CD46-211ENST00000464082 USP54Q70EL1 1684 aa7.67□□□□□ -1.18
CD46-211ENST00000464082 COL18A1P39060 1754 aa7.66□□□□□ -1.18
CD46-211ENST00000464082 LEFTY1O75610 366 aa7.66□□□□□ -1.18
CD46-211ENST00000464082 ATG7O95352 703 aa7.66□□□□□ -1.18
CD46-211ENST00000464082 HP1BP3Q5SSJ5 553 aaPredicted RBP7.66□□□□□ -1.18
CD46-211ENST00000464082 ZSWIM9Q86XI8 627 aa7.66□□□□□ -1.18
CD46-211ENST00000464082 CCNJLQ8IV13 435 aa7.66□□□□□ -1.18
CD46-211ENST00000464082 LRRC56Q8IYG6 542 aaPredicted RBP7.66□□□□□ -1.18
CD46-211ENST00000464082 TOX2Q96NM4 488 aa7.66□□□□□ -1.18
CD46-211ENST00000464082 CDK19Q9BWU1 502 aa7.66□□□□□ -1.18
CD46-211ENST00000464082 PLAGL2Q9UPG8 496 aa7.66□□□□□ -1.18
CD46-211ENST00000464082 CENPJQ9HC77 1338 aaPredicted RBP7.66□□□□□ -1.18
CD46-211ENST00000464082 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.65□□□□□ -1.18
CD46-211ENST00000464082 ARHGEF10O15013 1369 aa7.65□□□□□ -1.18
CD46-211ENST00000464082 IFI16Q16666 785 aaKnown RBP7.65□□□□□ -1.18
CD46-211ENST00000464082 SSH2Q76I76 1423 aa7.65□□□□□ -1.18
CD46-211ENST00000464082 FLAD1Q8NFF5 587 aa7.65□□□□□ -1.18
CD46-211ENST00000464082 LIN37Q96GY3 246 aaPredicted RBP7.65□□□□□ -1.18
CD46-211ENST00000464082 TCF12Q99081 682 aa7.65□□□□□ -1.18
CD46-211ENST00000464082 WNK3Q9BYP7 1800 aa7.65□□□□□ -1.18
CD46-211ENST00000464082 THSD7AQ9UPZ6 1657 aa7.64□□□□□ -1.19
CD46-211ENST00000464082 PPIP5K1Q6PFW1 1433 aa7.64□□□□□ -1.19
CD46-211ENST00000464082 ROCK2O75116 1388 aaKnown RBP7.64□□□□□ -1.19
CD46-211ENST00000464082 ACEP12821 1306 aa7.64□□□□□ -1.19
CD46-211ENST00000464082 B8ZZF3 427 aa7.64□□□□□ -1.19
CD46-211ENST00000464082 BUD31P41223 144 aaPredicted RBP7.64□□□□□ -1.19
CD46-211ENST00000464082 OXCT1P55809 520 aa7.64□□□□□ -1.19
CD46-211ENST00000464082 RBM6P78332 1123 aaKnown RBP7.64□□□□□ -1.19
CD46-211ENST00000464082 MTMR3Q13615 1198 aa7.64□□□□□ -1.19
CD46-211ENST00000464082 PDE3AQ14432 1141 aa7.64□□□□□ -1.19
CD46-211ENST00000464082 ECM1Q16610 540 aa7.64□□□□□ -1.19
CD46-211ENST00000464082 SLC23A3Q6PIS1 610 aa7.64□□□□□ -1.19
CD46-211ENST00000464082 WDR89Q96FK6 387 aaPredicted RBP7.64□□□□□ -1.19
CD46-211ENST00000464082 HRASLS5Q96KN8 279 aa7.64□□□□□ -1.19
CD46-211ENST00000464082 ZFYVE1Q9HBF4 777 aa7.64□□□□□ -1.19
CD46-211ENST00000464082 ZFYVE28Q9HCC9 887 aa7.64□□□□□ -1.19
CD46-211ENST00000464082 SBNO2Q9Y2G9 1366 aa7.63□□□□□ -1.19
CD46-211ENST00000464082 A0A1W2PP55 124 aa7.63□□□□□ -1.19
CD46-211ENST00000464082 TSPAN15O95858 294 aa7.63□□□□□ -1.19
CD46-211ENST00000464082 KCNMB1Q16558 191 aa7.63□□□□□ -1.19
CD46-211ENST00000464082 LMCD1Q9NZU5 365 aa7.63□□□□□ -1.19
CD46-211ENST00000464082 LTN1O94822 1766 aa7.63□□□□□ -1.19
CD46-211ENST00000464082 SLIT3O75094 1523 aa7.62□□□□□ -1.19
CD46-211ENST00000464082 CD163L1Q9NR16 1453 aa7.62□□□□□ -1.19
CD46-211ENST00000464082 USP6P35125 1406 aa7.62□□□□□ -1.19
CD46-211ENST00000464082 TMPRSS2O15393 492 aa7.62□□□□□ -1.19
CD46-211ENST00000464082 B3GALT4O96024 378 aa7.62□□□□□ -1.19
CD46-211ENST00000464082 CEACAM5P06731 702 aa7.62□□□□□ -1.19
CD46-211ENST00000464082 ZSCAN22P10073 491 aaPredicted RBP7.62□□□□□ -1.19
CD46-211ENST00000464082 ZSCAN18Q8TBC5 510 aaPredicted RBP7.62□□□□□ -1.19
CD46-211ENST00000464082 LIN7BQ9HAP6 207 aa7.62□□□□□ -1.19
CD46-211ENST00000464082 FAM53CQ9NYF3 392 aa7.62□□□□□ -1.19
CD46-211ENST00000464082 TRPC5Q9UL62 973 aaPredicted RBP7.62□□□□□ -1.19
CD46-211ENST00000464082 MYOM1P52179 1685 aa7.62□□□□□ -1.19
CD46-211ENST00000464082 TNS1Q9HBL0 1735 aaKnown RBP7.61□□□□□ -1.19
CD46-211ENST00000464082 CAMTA1Q9Y6Y1 1673 aa7.61□□□□□ -1.19
CD46-211ENST00000464082 USP19O94966 1318 aa7.61□□□□□ -1.19
CD46-211ENST00000464082 FAM83GA6ND36 823 aa7.61□□□□□ -1.19
CD46-211ENST00000464082 LIG1P18858 919 aa7.61□□□□□ -1.19
CD46-211ENST00000464082 ANGEL2Q5VTE6 544 aaKnown RBP7.61□□□□□ -1.19
CD46-211ENST00000464082 FYB2Q5VWT5 728 aa7.61□□□□□ -1.19
CD46-211ENST00000464082 UNC5CLQ8IV45 518 aa7.61□□□□□ -1.19
CD46-211ENST00000464082 NGDNQ8NEJ9 315 aaKnown RBP7.61□□□□□ -1.19
CD46-211ENST00000464082 GTF3C2Q8WUA4 911 aaPredicted RBP7.61□□□□□ -1.19
CD46-211ENST00000464082 SBF2Q86WG5 1849 aa7.61□□□□□ -1.19
CD46-211ENST00000464082 CPSF1Q10570 1443 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms