RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.11■□□□□ 0.65
SND1-203ENST00000463020 SLC44A5Q8NCS7 719 aa19.11■□□□□ 0.65
SND1-203ENST00000463020 ATP11BQ9Y2G3 1177 aa19.11■□□□□ 0.65
SND1-203ENST00000463020 ZNF236Q9UL36 1845 aa19.11■□□□□ 0.65
SND1-203ENST00000463020 USP14P54578 494 aa19.1■□□□□ 0.65
SND1-203ENST00000463020 SHHQ15465 462 aa19.1■□□□□ 0.65
SND1-203ENST00000463020 SLFNL1Q499Z3 407 aa19.1■□□□□ 0.65
SND1-203ENST00000463020 ZKSCAN2Q63HK3 967 aa19.1■□□□□ 0.65
SND1-203ENST00000463020 SH3RF1Q7Z6J0 888 aa19.1■□□□□ 0.65
SND1-203ENST00000463020 GLRX3O76003 335 aaKnown RBP19.09■□□□□ 0.65
SND1-203ENST00000463020 FAM109BQ6ICB4 259 aaPredicted RBP19.09■□□□□ 0.65
SND1-203ENST00000463020 SIAH1Q8IUQ4 282 aa19.09■□□□□ 0.65
SND1-203ENST00000463020 EXOC6BQ9Y2D4 811 aa19.09■□□□□ 0.65
SND1-203ENST00000463020 MUC3AQ02505 3323 aa19.09■□□□□ 0.65
SND1-203ENST00000463020 ERCC3P19447 782 aa19.08■□□□□ 0.64
SND1-203ENST00000463020 TRIM60Q495X7 471 aa19.08■□□□□ 0.64
SND1-203ENST00000463020 SLC39A5Q6ZMH5 540 aa19.08■□□□□ 0.64
SND1-203ENST00000463020 TTC6Q86TZ1 520 aa19.08■□□□□ 0.64
SND1-203ENST00000463020 SDR42E1Q8WUS8 393 aa19.08■□□□□ 0.64
SND1-203ENST00000463020 LBHD1Q9BQE6 289 aaPredicted RBP19.08■□□□□ 0.64
SND1-203ENST00000463020 SPATC1LQ9H0A9 340 aa19.08■□□□□ 0.64
SND1-203ENST00000463020 IVNS1ABPQ9Y6Y0 642 aa19.08■□□□□ 0.64
SND1-203ENST00000463020 TRIM43BA6NCK2 446 aa19.07■□□□□ 0.64
SND1-203ENST00000463020 ITGB8P26012 769 aa19.07■□□□□ 0.64
SND1-203ENST00000463020 OLFML2BQ68BL8 750 aa19.07■□□□□ 0.64
SND1-203ENST00000463020 CEP85Q6P2H3 762 aa19.07■□□□□ 0.64
SND1-203ENST00000463020 AACSQ86V21 672 aa19.07■□□□□ 0.64
SND1-203ENST00000463020 BADQ92934 168 aa19.07■□□□□ 0.64
SND1-203ENST00000463020 TRIM43Q96BQ3 446 aaPredicted RBP19.07■□□□□ 0.64
SND1-203ENST00000463020 DYNLL2Q96FJ2 89 aa19.07■□□□□ 0.64
SND1-203ENST00000463020 MAGEB6P1A0A0J9YX57 407 aa19.06■□□□□ 0.64
SND1-203ENST00000463020 TCRBV5S4A2TA0A5A2 114 aa19.06■□□□□ 0.64
SND1-203ENST00000463020 MPHOSPH10O00566 681 aaKnown RBP19.06■□□□□ 0.64
SND1-203ENST00000463020 IGSF3O75054 1194 aa19.06■□□□□ 0.64
SND1-203ENST00000463020 MYCNP04198 464 aaPredicted RBP19.06■□□□□ 0.64
SND1-203ENST00000463020 CHGBP05060 677 aa19.06■□□□□ 0.64
SND1-203ENST00000463020 PDE6AP16499 860 aa19.06■□□□□ 0.64
SND1-203ENST00000463020 MAP3K12Q12852 859 aa19.06■□□□□ 0.64
SND1-203ENST00000463020 FAM47AQ5JRC9 791 aa19.06■□□□□ 0.64
SND1-203ENST00000463020 DPP9Q86TI2 863 aa19.06■□□□□ 0.64
SND1-203ENST00000463020 ITPRIPQ8IWB1 547 aa19.06■□□□□ 0.64
SND1-203ENST00000463020 SPICE1Q8N0Z3 855 aa19.06■□□□□ 0.64
SND1-203ENST00000463020 LCORLQ8N3X6 602 aa19.06■□□□□ 0.64
SND1-203ENST00000463020 FERMT2Q96AC1 680 aa19.06■□□□□ 0.64
SND1-203ENST00000463020 ATG4CQ96DT6 458 aa19.06■□□□□ 0.64
SND1-203ENST00000463020 CDX2Q99626 313 aaPredicted RBP19.06■□□□□ 0.64
SND1-203ENST00000463020 TANGO6Q9C0B7 1094 aa19.06■□□□□ 0.64
SND1-203ENST00000463020 TTYH1Q9H313 450 aaPredicted RBP19.06■□□□□ 0.64
SND1-203ENST00000463020 IL1RAPL2Q9NP60 686 aa19.06■□□□□ 0.64
SND1-203ENST00000463020 CABP5Q9NP86 173 aa19.06■□□□□ 0.64
SND1-203ENST00000463020 PRDM5Q9NQX1 630 aaPredicted RBP19.06■□□□□ 0.64
SND1-203ENST00000463020 PDLIM7Q9NR12 457 aa19.06■□□□□ 0.64
SND1-203ENST00000463020 MSCO60682 206 aa19.05■□□□□ 0.64
SND1-203ENST00000463020 POLR3DP05423 398 aaPredicted RBP19.05■□□□□ 0.64
SND1-203ENST00000463020 ADCYAP1R1P41586 468 aa19.05■□□□□ 0.64
SND1-203ENST00000463020 COG2Q14746 738 aa19.05■□□□□ 0.64
SND1-203ENST00000463020 SNX17Q15036 470 aa19.05■□□□□ 0.64
SND1-203ENST00000463020 MCM9Q9NXL9 1143 aa19.05■□□□□ 0.64
SND1-203ENST00000463020 ZNF532Q9HCE3 1301 aa19.04■□□□□ 0.64
SND1-203ENST00000463020 CYP2D7A0A087X1C5 515 aa19.04■□□□□ 0.64
SND1-203ENST00000463020 PRKAB2O43741 272 aa19.04■□□□□ 0.64
SND1-203ENST00000463020 AKR1B1P15121 316 aa19.04■□□□□ 0.64
SND1-203ENST00000463020 EPHB4P54760 987 aa19.04■□□□□ 0.64
SND1-203ENST00000463020 LRRC41Q15345 812 aa19.04■□□□□ 0.64
SND1-203ENST00000463020 LENG1Q96BZ8 264 aaPredicted RBP19.04■□□□□ 0.64
SND1-203ENST00000463020 SEMA6BQ9H3T3 888 aa19.04■□□□□ 0.64
SND1-203ENST00000463020 DCP1AQ9NPI6 582 aaPredicted RBP19.04■□□□□ 0.64
SND1-203ENST00000463020 PARP14Q460N5 1801 aa19.04■□□□□ 0.64
SND1-203ENST00000463020 SEPT4O43236 478 aa19.03■□□□□ 0.64
SND1-203ENST00000463020 TAL1P17542 331 aaPredicted RBP19.03■□□□□ 0.64
SND1-203ENST00000463020 DSG3P32926 999 aa19.03■□□□□ 0.64
SND1-203ENST00000463020 PLS1Q14651 629 aa19.03■□□□□ 0.64
SND1-203ENST00000463020 SLC9C2Q5TAH2 1124 aa19.03■□□□□ 0.64
SND1-203ENST00000463020 ZNF697Q5TEC3 545 aa19.03■□□□□ 0.64
SND1-203ENST00000463020 CERS3Q8IU89 383 aa19.03■□□□□ 0.64
SND1-203ENST00000463020 MAML3Q96JK9 1138 aa19.03■□□□□ 0.64
SND1-203ENST00000463020 TMEM132BQ14DG7 1078 aa19.02■□□□□ 0.64
SND1-203ENST00000463020 SAMD1Q6SPF0 538 aaPredicted RBP19.02■□□□□ 0.64
SND1-203ENST00000463020 NCAPG2Q86XI2 1143 aa19.02■□□□□ 0.64
SND1-203ENST00000463020 SHCBP1Q8NEM2 672 aa19.02■□□□□ 0.64
SND1-203ENST00000463020 MYLIPQ8WY64 445 aa19.02■□□□□ 0.64
SND1-203ENST00000463020 ARMT1Q9H993 441 aa19.02■□□□□ 0.64
SND1-203ENST00000463020 PRKAG2Q9UGJ0 569 aa19.02■□□□□ 0.64
SND1-203ENST00000463020 CHD9Q3L8U1 2897 aa19.02■□□□□ 0.63
SND1-203ENST00000463020 KBTBD13C9JR72 458 aa19.01■□□□□ 0.63
SND1-203ENST00000463020 GOLIM4O00461 696 aa19.01■□□□□ 0.63
SND1-203ENST00000463020 PGK2P07205 417 aa19.01■□□□□ 0.63
SND1-203ENST00000463020 FTSJ3Q8IY81 847 aaKnown RBP19.01■□□□□ 0.63
SND1-203ENST00000463020 ARRDC4Q8NCT1 418 aa19.01■□□□□ 0.63
SND1-203ENST00000463020 CRNKL1Q9BZJ0 848 aaKnown RBP19.01■□□□□ 0.63
SND1-203ENST00000463020 FBXO28Q9NVF7 368 aa19.01■□□□□ 0.63
SND1-203ENST00000463020 HOXC10Q9NYD6 342 aa19.01■□□□□ 0.63
SND1-203ENST00000463020 COL11A1P12107 1806 aaPredicted RBP19■□□□□ 0.63
SND1-203ENST00000463020 STRNO43815 780 aa19■□□□□ 0.63
SND1-203ENST00000463020 FLOT1O75955 427 aa19■□□□□ 0.63
SND1-203ENST00000463020 TLE2Q04725 743 aa19■□□□□ 0.63
SND1-203ENST00000463020 MAFAQ8NHW3 353 aaPredicted RBP19■□□□□ 0.63
SND1-203ENST00000463020 PANK1Q8TE04 598 aa19■□□□□ 0.63
SND1-203ENST00000463020 DNAJC2Q99543 621 aaKnown RBP19■□□□□ 0.63
SND1-203ENST00000463020 APBB1O00213 710 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms