RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 SLC39A5Q6ZMH5 540 aa9.55□□□□□ -0.88
SMC3-202ENST00000462899 ERICH6Q7L0X2 663 aa9.55□□□□□ -0.88
SMC3-202ENST00000462899 SH3RF1Q7Z6J0 888 aa9.55□□□□□ -0.88
SMC3-202ENST00000462899 NPLOC4Q8TAT6 608 aa9.55□□□□□ -0.88
SMC3-202ENST00000462899 SSH1Q8WYL5 1049 aa9.55□□□□□ -0.88
SMC3-202ENST00000462899 BADQ92934 168 aa9.55□□□□□ -0.88
SMC3-202ENST00000462899 TRIM43Q96BQ3 446 aaPredicted RBP9.55□□□□□ -0.88
SMC3-202ENST00000462899 EDC3Q96F86 508 aaKnown RBP9.55□□□□□ -0.88
SMC3-202ENST00000462899 XAGE2Q96GT9 111 aa9.55□□□□□ -0.88
SMC3-202ENST00000462899 TMOD4Q9NZQ9 345 aa9.55□□□□□ -0.88
SMC3-202ENST00000462899 HMG20BQ9P0W2 317 aa9.55□□□□□ -0.88
SMC3-202ENST00000462899 PI4KBQ9UBF8 816 aa9.55□□□□□ -0.88
SMC3-202ENST00000462899 ZBTB21Q9ULJ3 1066 aa9.55□□□□□ -0.88
SMC3-202ENST00000462899 NAV1Q8NEY1 1877 aa9.55□□□□□ -0.88
SMC3-202ENST00000462899 FLT1P17948 1338 aa9.55□□□□□ -0.88
SMC3-202ENST00000462899 PIEZO1Q92508 2521 aa9.54□□□□□ -0.88
SMC3-202ENST00000462899 NUDT7P0C024 238 aa9.54□□□□□ -0.88
SMC3-202ENST00000462899 PLA2G5P39877 138 aa9.54□□□□□ -0.88
SMC3-202ENST00000462899 EPHB4P54760 987 aa9.54□□□□□ -0.88
SMC3-202ENST00000462899 TRIM60Q495X7 471 aa9.54□□□□□ -0.88
SMC3-202ENST00000462899 MFSD14CQ5VZR4 134 aa9.54□□□□□ -0.88
SMC3-202ENST00000462899 SH3RF3Q8TEJ3 882 aaPredicted RBP9.54□□□□□ -0.88
SMC3-202ENST00000462899 PAGR1Q9BTK6 254 aa9.54□□□□□ -0.88
SMC3-202ENST00000462899 DHX36Q9H2U1 1008 aaKnown RBP9.54□□□□□ -0.88
SMC3-202ENST00000462899 BTBD7Q9P203 1132 aa9.54□□□□□ -0.88
SMC3-202ENST00000462899 ATP11BQ9Y2G3 1177 aa9.54□□□□□ -0.88
SMC3-202ENST00000462899 TCF20Q9UGU0 1960 aaKnown RBP9.54□□□□□ -0.88
SMC3-202ENST00000462899 ROBO3Q96MS0 1386 aa9.53□□□□□ -0.88
SMC3-202ENST00000462899 GDF11O95390 407 aa9.53□□□□□ -0.88
SMC3-202ENST00000462899 LDHCP07864 332 aa9.53□□□□□ -0.88
SMC3-202ENST00000462899 CYP2C19P33261 490 aa9.53□□□□□ -0.88
SMC3-202ENST00000462899 MCAMP43121 646 aa9.53□□□□□ -0.88
SMC3-202ENST00000462899 PPP4CP60510 307 aa9.53□□□□□ -0.88
SMC3-202ENST00000462899 GSTO1P78417 241 aa9.53□□□□□ -0.88
SMC3-202ENST00000462899 MVPQ14764 893 aaKnown RBP9.53□□□□□ -0.88
SMC3-202ENST00000462899 GRIN2CQ14957 1233 aa9.53□□□□□ -0.88
SMC3-202ENST00000462899 GJC2Q5T442 439 aaPredicted RBP9.53□□□□□ -0.88
SMC3-202ENST00000462899 OLFML2BQ68BL8 750 aa9.53□□□□□ -0.88
SMC3-202ENST00000462899 USP17L2Q6R6M4 530 aa9.53□□□□□ -0.88
SMC3-202ENST00000462899 TBC1D9Q6ZT07 1266 aa9.53□□□□□ -0.88
SMC3-202ENST00000462899 ADGRA1Q86SQ6 560 aa9.53□□□□□ -0.88
SMC3-202ENST00000462899 TEX11Q8IYF3 940 aa9.53□□□□□ -0.88
SMC3-202ENST00000462899 SPATA5Q8NB90 893 aa9.53□□□□□ -0.88
SMC3-202ENST00000462899 OXER1Q8TDS5 423 aa9.53□□□□□ -0.88
SMC3-202ENST00000462899 PRKAG2Q9UGJ0 569 aa9.53□□□□□ -0.88
SMC3-202ENST00000462899 SPDYE16A6NNV3 312 aaPredicted RBP9.52□□□□□ -0.89
SMC3-202ENST00000462899 HOXB1P14653 301 aaPredicted RBP9.52□□□□□ -0.89
SMC3-202ENST00000462899 MTX1Q13505 466 aa9.52□□□□□ -0.89
SMC3-202ENST00000462899 E2F4Q16254 413 aa9.52□□□□□ -0.89
SMC3-202ENST00000462899 TATDN1Q6P1N9 297 aa9.52□□□□□ -0.89
SMC3-202ENST00000462899 CATSPERGQ6ZRH7 1159 aa9.52□□□□□ -0.89
SMC3-202ENST00000462899 PTCD2Q8WV60 388 aaKnown RBP9.52□□□□□ -0.89
SMC3-202ENST00000462899 NDUFB9Q9Y6M9 179 aa9.52□□□□□ -0.89
SMC3-202ENST00000462899 USP17L15C9J2P7 530 aa9.51□□□□□ -0.89
SMC3-202ENST00000462899 USP17L13C9JLJ4 530 aa9.51□□□□□ -0.89
SMC3-202ENST00000462899 USP17L11C9JVI0 530 aa9.51□□□□□ -0.89
SMC3-202ENST00000462899 USP17L18D6R9N7 530 aa9.51□□□□□ -0.89
SMC3-202ENST00000462899 USP17L22D6RA61 530 aa9.51□□□□□ -0.89
SMC3-202ENST00000462899 USP17L17D6RBQ6 530 aa9.51□□□□□ -0.89
SMC3-202ENST00000462899 USP17L19D6RCP7 530 aa9.51□□□□□ -0.89
SMC3-202ENST00000462899 USP17L20D6RJB6 530 aa9.51□□□□□ -0.89
SMC3-202ENST00000462899 DPYSL4O14531 572 aa9.51□□□□□ -0.89
SMC3-202ENST00000462899 KIAA0355O15063 1070 aa9.51□□□□□ -0.89
SMC3-202ENST00000462899 SEPT4O43236 478 aa9.51□□□□□ -0.89
SMC3-202ENST00000462899 GLRX3O76003 335 aaKnown RBP9.51□□□□□ -0.89
SMC3-202ENST00000462899 UBTFL1P0CB47 393 aaPredicted RBP9.51□□□□□ -0.89
SMC3-202ENST00000462899 VCAM1P19320 739 aa9.51□□□□□ -0.89
SMC3-202ENST00000462899 DNAJB2P25686 324 aa9.51□□□□□ -0.89
SMC3-202ENST00000462899 EMP3P54852 163 aa9.51□□□□□ -0.89
SMC3-202ENST00000462899 CCNA1P78396 465 aa9.51□□□□□ -0.89
SMC3-202ENST00000462899 USP17L24Q0WX57 530 aa9.51□□□□□ -0.89
SMC3-202ENST00000462899 TFCP2Q12800 502 aa9.51□□□□□ -0.89
SMC3-202ENST00000462899 CAMK2BQ13554 666 aa9.51□□□□□ -0.89
SMC3-202ENST00000462899 LRRC41Q15345 812 aa9.51□□□□□ -0.89
SMC3-202ENST00000462899 FOXP4Q8IVH2 680 aaPredicted RBP9.51□□□□□ -0.89
SMC3-202ENST00000462899 ARRDC4Q8NCT1 418 aa9.51□□□□□ -0.89
SMC3-202ENST00000462899 KIAA1683Q9H0B3 1180 aa9.51□□□□□ -0.89
SMC3-202ENST00000462899 MRS2Q9HD23 443 aa9.51□□□□□ -0.89
SMC3-202ENST00000462899 PRDM5Q9NQX1 630 aaPredicted RBP9.51□□□□□ -0.89
SMC3-202ENST00000462899 AATFQ9NY61 560 aaKnown RBP eCLIP9.51□□□□□ -0.89
SMC3-202ENST00000462899 MCM3APO60318 1980 aa9.51□□□□□ -0.89
SMC3-202ENST00000462899 WDFY4Q6ZS81 3184 aa9.5□□□□□ -0.89
SMC3-202ENST00000462899 KBTBD13C9JR72 458 aa9.5□□□□□ -0.89
SMC3-202ENST00000462899 GH2P01242 217 aa9.5□□□□□ -0.89
SMC3-202ENST00000462899 ADORA2AP29274 412 aa9.5□□□□□ -0.89
SMC3-202ENST00000462899 CNGA1P29973 690 aa9.5□□□□□ -0.89
SMC3-202ENST00000462899 ATP2B2Q01814 1243 aa9.5□□□□□ -0.89
SMC3-202ENST00000462899 ALDH1L2Q3SY69 923 aa9.5□□□□□ -0.89
SMC3-202ENST00000462899 FAM47AQ5JRC9 791 aa9.5□□□□□ -0.89
SMC3-202ENST00000462899 RASIP1Q5U651 963 aa9.5□□□□□ -0.89
SMC3-202ENST00000462899 MAPKAPK5Q8IW41 473 aa9.5□□□□□ -0.89
SMC3-202ENST00000462899 CCAR1Q8IX12 1150 aaKnown RBP9.5□□□□□ -0.89
SMC3-202ENST00000462899 KCNV2Q8TDN2 545 aa9.5□□□□□ -0.89
SMC3-202ENST00000462899 TGFBRAP1Q8WUH2 860 aa9.5□□□□□ -0.89
SMC3-202ENST00000462899 RNPC3Q96LT9 517 aaKnown RBP9.5□□□□□ -0.89
SMC3-202ENST00000462899 ZSWIM6Q9HCJ5 1215 aa9.5□□□□□ -0.89
SMC3-202ENST00000462899 PALD1Q9ULE6 856 aa9.5□□□□□ -0.89
SMC3-202ENST00000462899 PHF24Q9UPV7 400 aa9.5□□□□□ -0.89
SMC3-202ENST00000462899 AKAP2Q9Y2D5 859 aa9.5□□□□□ -0.89
SMC3-202ENST00000462899 COBLO75128 1261 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms