RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 ZSCAN16Q9H4T2 348 aaPredicted RBP17.41■□□□□ 0.38
RPRD1B-203ENST00000462548 TFIP11Q9UBB9 837 aaKnown RBP17.41■□□□□ 0.38
RPRD1B-203ENST00000462548 CERKLQ49MI3 558 aaPredicted RBP17.41■□□□□ 0.38
RPRD1B-203ENST00000462548 TMEM87AQ8NBN3 555 aa17.41■□□□□ 0.38
RPRD1B-203ENST00000462548 V9GY48 417 aaPredicted RBP17.41■□□□□ 0.38
RPRD1B-203ENST00000462548 PRPF3O43395 683 aaKnown RBP17.4■□□□□ 0.38
RPRD1B-203ENST00000462548 GDF11O95390 407 aa17.4■□□□□ 0.38
RPRD1B-203ENST00000462548 PTMSP20962 102 aa17.4■□□□□ 0.38
RPRD1B-203ENST00000462548 KIF23Q02241 960 aaPredicted RBP17.4■□□□□ 0.38
RPRD1B-203ENST00000462548 LRRC47Q8N1G4 583 aaKnown RBP17.4■□□□□ 0.38
RPRD1B-203ENST00000462548 GPT2Q8TD30 523 aa17.4■□□□□ 0.38
RPRD1B-203ENST00000462548 PKNOX2Q96KN3 472 aa17.4■□□□□ 0.38
RPRD1B-203ENST00000462548 CCDC17Q96LX7 622 aa17.4■□□□□ 0.38
RPRD1B-203ENST00000462548 CLIP2Q9UDT6 1046 aa17.4■□□□□ 0.38
RPRD1B-203ENST00000462548 GOLGA8HP0CJ92 632 aa17.4■□□□□ 0.38
RPRD1B-203ENST00000462548 PALM3A6NDB9 673 aaPredicted RBP17.39■□□□□ 0.37
RPRD1B-203ENST00000462548 MYO1BO43795 1136 aa17.39■□□□□ 0.37
RPRD1B-203ENST00000462548 VEGFAP15692 232 aaPredicted RBP17.39■□□□□ 0.37
RPRD1B-203ENST00000462548 KIF5BP33176 963 aa17.39■□□□□ 0.37
RPRD1B-203ENST00000462548 FAM83AQ86UY5 434 aa17.39■□□□□ 0.37
RPRD1B-203ENST00000462548 WASF1Q92558 559 aa17.39■□□□□ 0.37
RPRD1B-203ENST00000462548 TRIM34Q9BYJ4 488 aa17.39■□□□□ 0.37
RPRD1B-203ENST00000462548 KCNJ14Q9UNX9 436 aa17.39■□□□□ 0.37
RPRD1B-203ENST00000462548 TTLL1O95922 423 aa17.39■□□□□ 0.37
RPRD1B-203ENST00000462548 MMP14P50281 582 aa17.39■□□□□ 0.37
RPRD1B-203ENST00000462548 USP17L2Q6R6M4 530 aa17.39■□□□□ 0.37
RPRD1B-203ENST00000462548 RGS22Q8NE09 1264 aa17.39■□□□□ 0.37
RPRD1B-203ENST00000462548 PIBF1Q8WXW3 757 aa17.39■□□□□ 0.37
RPRD1B-203ENST00000462548 FTOQ9C0B1 505 aaKnown RBP eCLIP17.39■□□□□ 0.37
RPRD1B-203ENST00000462548 CPVLQ9H3G5 476 aa17.39■□□□□ 0.37
RPRD1B-203ENST00000462548 DDX49Q9Y6V7 483 aaKnown RBP17.39■□□□□ 0.37
RPRD1B-203ENST00000462548 USP17L5A8MUK1 530 aa17.38■□□□□ 0.37
RPRD1B-203ENST00000462548 CYTH3O43739 400 aa17.38■□□□□ 0.37
RPRD1B-203ENST00000462548 KRT85P78386 507 aa17.38■□□□□ 0.37
RPRD1B-203ENST00000462548 SIAH1Q8IUQ4 282 aa17.38■□□□□ 0.37
RPRD1B-203ENST00000462548 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.38■□□□□ 0.37
RPRD1B-203ENST00000462548 MYH4Q9Y623 1939 aa17.38■□□□□ 0.37
RPRD1B-203ENST00000462548 SEPT2Q15019 361 aa17.38■□□□□ 0.37
RPRD1B-203ENST00000462548 KIF4BQ2VIQ3 1234 aa17.38■□□□□ 0.37
RPRD1B-203ENST00000462548 AKAP17AQ02040 695 aaKnown RBP17.37■□□□□ 0.37
RPRD1B-203ENST00000462548 RASA3Q14644 834 aa17.37■□□□□ 0.37
RPRD1B-203ENST00000462548 VPS54Q9P1Q0 977 aa17.37■□□□□ 0.37
RPRD1B-203ENST00000462548 HERC5Q9UII4 1024 aaKnown RBP17.37■□□□□ 0.37
RPRD1B-203ENST00000462548 PDHBP11177 359 aa17.37■□□□□ 0.37
RPRD1B-203ENST00000462548 ATP2B2Q01814 1243 aa17.37■□□□□ 0.37
RPRD1B-203ENST00000462548 ABCB5Q2M3G0 1257 aa17.37■□□□□ 0.37
RPRD1B-203ENST00000462548 KLHL40Q2TBA0 621 aa17.37■□□□□ 0.37
RPRD1B-203ENST00000462548 SKOR2Q2VWA4 1001 aaPredicted RBP17.37■□□□□ 0.37
RPRD1B-203ENST00000462548 GPC2Q8N158 579 aa17.37■□□□□ 0.37
RPRD1B-203ENST00000462548 TRPM4Q8TD43 1214 aa17.37■□□□□ 0.37
RPRD1B-203ENST00000462548 USP28Q96RU2 1077 aa17.37■□□□□ 0.37
RPRD1B-203ENST00000462548 GZF1Q9H116 711 aaPredicted RBP17.37■□□□□ 0.37
RPRD1B-203ENST00000462548 RNF181Q9P0P0 153 aa17.37■□□□□ 0.37
RPRD1B-203ENST00000462548 GH2P01242 217 aa17.36■□□□□ 0.37
RPRD1B-203ENST00000462548 MMP1P03956 469 aa17.36■□□□□ 0.37
RPRD1B-203ENST00000462548 EEF2P13639 858 aaKnown RBP17.36■□□□□ 0.37
RPRD1B-203ENST00000462548 TRIM29Q14134 588 aa17.36■□□□□ 0.37
RPRD1B-203ENST00000462548 MIGA2Q7L4E1 593 aa17.36■□□□□ 0.37
RPRD1B-203ENST00000462548 TEPSINQ96N21 525 aa17.36■□□□□ 0.37
RPRD1B-203ENST00000462548 GPRC5DQ9NZD1 345 aa17.36■□□□□ 0.37
RPRD1B-203ENST00000462548 HACL1Q9UJ83 578 aa17.36■□□□□ 0.37
RPRD1B-203ENST00000462548 KLRF2D3W0D1 207 aa17.36■□□□□ 0.37
RPRD1B-203ENST00000462548 PARP1P09874 1014 aaKnown RBP17.36■□□□□ 0.37
RPRD1B-203ENST00000462548 SNHG28P0DPA3 235 aa17.36■□□□□ 0.37
RPRD1B-203ENST00000462548 FRMPD2Q68DX3 1309 aaPredicted RBP17.35■□□□□ 0.37
RPRD1B-203ENST00000462548 EPS15P42566 896 aa17.35■□□□□ 0.37
RPRD1B-203ENST00000462548 GNAQP50148 359 aa17.35■□□□□ 0.37
RPRD1B-203ENST00000462548 CEBPZQ03701 1054 aaKnown RBP17.35■□□□□ 0.37
RPRD1B-203ENST00000462548 TPRNQ4KMQ1 711 aa17.35■□□□□ 0.37
RPRD1B-203ENST00000462548 TMEM179Q6ZVK1 233 aa17.35■□□□□ 0.37
RPRD1B-203ENST00000462548 LEO1Q8WVC0 666 aaPredicted RBP17.35■□□□□ 0.37
RPRD1B-203ENST00000462548 DDNO94850 711 aaPredicted RBP17.35■□□□□ 0.37
RPRD1B-203ENST00000462548 PFKFB3Q16875 520 aaPredicted RBP17.35■□□□□ 0.37
RPRD1B-203ENST00000462548 OXER1Q8TDS5 423 aa17.35■□□□□ 0.37
RPRD1B-203ENST00000462548 KANSL2Q9H9L4 492 aa17.35■□□□□ 0.37
RPRD1B-203ENST00000462548 NYAP2Q9P242 653 aa17.35■□□□□ 0.37
RPRD1B-203ENST00000462548 BTBD18B2RXH4 712 aa17.34■□□□□ 0.37
RPRD1B-203ENST00000462548 H7C1D1 291 aa17.34■□□□□ 0.37
RPRD1B-203ENST00000462548 SCG2P13521 617 aa17.34■□□□□ 0.37
RPRD1B-203ENST00000462548 U2AF2P26368 475 aaKnown RBP eCLIP17.34■□□□□ 0.375e-8■■■■□ 20
RPRD1B-203ENST00000462548 MYSM1Q5VVJ2 828 aa17.34■□□□□ 0.37
RPRD1B-203ENST00000462548 BRAPQ7Z569 592 aa17.34■□□□□ 0.37
RPRD1B-203ENST00000462548 DIS3L2Q8IYB7 885 aaKnown RBP17.34■□□□□ 0.37
RPRD1B-203ENST00000462548 MKL1Q969V6 931 aa17.34■□□□□ 0.37
RPRD1B-203ENST00000462548 TBC1D12O60347 775 aa17.33■□□□□ 0.37
RPRD1B-203ENST00000462548 TNNI2P48788 182 aa17.33■□□□□ 0.37
RPRD1B-203ENST00000462548 HIRAP54198 1017 aaPredicted RBP17.33■□□□□ 0.37
RPRD1B-203ENST00000462548 ICA1Q05084 483 aa17.33■□□□□ 0.37
RPRD1B-203ENST00000462548 C9orf131Q5VYM1 1079 aa17.33■□□□□ 0.37
RPRD1B-203ENST00000462548 SPATA32Q96LK8 384 aa17.33■□□□□ 0.37
RPRD1B-203ENST00000462548 PHF20Q9BVI0 1012 aa17.33■□□□□ 0.37
RPRD1B-203ENST00000462548 UBA5Q9GZZ9 404 aa17.33■□□□□ 0.37
RPRD1B-203ENST00000462548 RBM27Q9P2N5 1060 aaKnown RBP17.33■□□□□ 0.37
RPRD1B-203ENST00000462548 ADAMTS3O15072 1205 aa17.33■□□□□ 0.36
RPRD1B-203ENST00000462548 MAP3K10Q02779 954 aa17.33■□□□□ 0.36
RPRD1B-203ENST00000462548 NR5A1Q13285 461 aa17.33■□□□□ 0.36
RPRD1B-203ENST00000462548 NPY5RQ15761 445 aa17.33■□□□□ 0.36
RPRD1B-203ENST00000462548 GPKOWQ92917 476 aaPredicted RBP eCLIP17.33■□□□□ 0.36
RPRD1B-203ENST00000462548 SCAND2PQ9GZW5 306 aaPredicted RBP17.33■□□□□ 0.36
RPRD1B-203ENST00000462548 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms