RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 CYP2D6P10635 497 aa18.53■□□□□ 0.56
SKA3-204ENST00000462482 ICA1Q05084 483 aa18.53■□□□□ 0.56
SKA3-204ENST00000462482 SIRT2Q8IXJ6 389 aa18.53■□□□□ 0.56
SKA3-204ENST00000462482 HAUS7Q99871 368 aa18.53■□□□□ 0.56
SKA3-204ENST00000462482 DDX20Q9UHI6 824 aaKnown RBP18.53■□□□□ 0.56
SKA3-204ENST00000462482 RCAN3Q9UKA8 241 aa18.53■□□□□ 0.56
SKA3-204ENST00000462482 PFASO15067 1338 aa18.52■□□□□ 0.56
SKA3-204ENST00000462482 A0A1W2PRG0 241 aa18.52■□□□□ 0.56
SKA3-204ENST00000462482 FLOT1O75955 427 aa18.52■□□□□ 0.56
SKA3-204ENST00000462482 COL6A1P12109 1028 aa18.52■□□□□ 0.56
SKA3-204ENST00000462482 PLS1Q14651 629 aa18.52■□□□□ 0.56
SKA3-204ENST00000462482 SLC44A5Q8NCS7 719 aa18.52■□□□□ 0.56
SKA3-204ENST00000462482 SHCBP1Q8NEM2 672 aa18.52■□□□□ 0.56
SKA3-204ENST00000462482 DYNLL2Q96FJ2 89 aa18.52■□□□□ 0.56
SKA3-204ENST00000462482 MOV10L1Q9BXT6 1211 aaKnown RBP18.52■□□□□ 0.56
SKA3-204ENST00000462482 LRRCC1Q9C099 1032 aa18.52■□□□□ 0.56
SKA3-204ENST00000462482 UBE2OQ9C0C9 1292 aaKnown RBP18.52■□□□□ 0.56
SKA3-204ENST00000462482 SPATC1LQ9H0A9 340 aa18.52■□□□□ 0.56
SKA3-204ENST00000462482 FOCADQ5VW36 1801 aa18.51■□□□□ 0.55
SKA3-204ENST00000462482 PRKAB2O43741 272 aa18.51■□□□□ 0.55
SKA3-204ENST00000462482 MAGEA10P43363 369 aaPredicted RBP18.51■□□□□ 0.55
SKA3-204ENST00000462482 UBE3CQ15386 1083 aa18.51■□□□□ 0.55
SKA3-204ENST00000462482 SAMD1Q6SPF0 538 aaPredicted RBP18.51■□□□□ 0.55
SKA3-204ENST00000462482 MROH8Q9H579 483 aa18.51■□□□□ 0.55
SKA3-204ENST00000462482 FLRT1Q9NZU1 646 aa18.51■□□□□ 0.55
SKA3-204ENST00000462482 TMX2Q9Y320 296 aa18.51■□□□□ 0.55
SKA3-204ENST00000462482 SLC4A4Q9Y6R1 1079 aa18.51■□□□□ 0.55
SKA3-204ENST00000462482 USP17L12C9JPN9 530 aa18.5■□□□□ 0.55
SKA3-204ENST00000462482 USP17L21D6R901 530 aa18.5■□□□□ 0.55
SKA3-204ENST00000462482 AKR1B1P15121 316 aa18.5■□□□□ 0.55
SKA3-204ENST00000462482 ERCC3P19447 782 aa18.5■□□□□ 0.55
SKA3-204ENST00000462482 ADORA2AP29274 412 aa18.5■□□□□ 0.55
SKA3-204ENST00000462482 DSG3P32926 999 aa18.5■□□□□ 0.55
SKA3-204ENST00000462482 CYP2C19P33261 490 aa18.5■□□□□ 0.55
SKA3-204ENST00000462482 CDK8P49336 464 aa18.5■□□□□ 0.55
SKA3-204ENST00000462482 C12orf60Q5U649 245 aa18.5■□□□□ 0.55
SKA3-204ENST00000462482 NCAPG2Q86XI2 1143 aa18.5■□□□□ 0.55
SKA3-204ENST00000462482 SPICE1Q8N0Z3 855 aa18.5■□□□□ 0.55
SKA3-204ENST00000462482 NPLOC4Q8TAT6 608 aa18.5■□□□□ 0.55
SKA3-204ENST00000462482 GPATCH3Q96I76 525 aa18.5■□□□□ 0.55
SKA3-204ENST00000462482 SENP6Q9GZR1 1112 aaPredicted RBP18.5■□□□□ 0.55
SKA3-204ENST00000462482 VCPKMTQ9H867 229 aa18.5■□□□□ 0.55
SKA3-204ENST00000462482 PRKAG2Q9UGJ0 569 aa18.5■□□□□ 0.55
SKA3-204ENST00000462482 WDR46O15213 610 aaKnown RBP18.49■□□□□ 0.55
SKA3-204ENST00000462482 EVX2Q03828 476 aa18.49■□□□□ 0.55
SKA3-204ENST00000462482 OLFML2BQ68BL8 750 aa18.49■□□□□ 0.55
SKA3-204ENST00000462482 TDHQ8IZJ6 230 aa18.49■□□□□ 0.55
SKA3-204ENST00000462482 ARRDC4Q8NCT1 418 aa18.49■□□□□ 0.55
SKA3-204ENST00000462482 LRCH3Q96II8 777 aa18.49■□□□□ 0.55
SKA3-204ENST00000462482 LBHD1Q9BQE6 289 aaPredicted RBP18.49■□□□□ 0.55
SKA3-204ENST00000462482 KANSL2Q9H9L4 492 aa18.49■□□□□ 0.55
SKA3-204ENST00000462482 DNM1LO00429 736 aa18.48■□□□□ 0.55
SKA3-204ENST00000462482 SOX1O00570 391 aaPredicted RBP18.48■□□□□ 0.55
SKA3-204ENST00000462482 RAD21O60216 631 aa18.48■□□□□ 0.55
SKA3-204ENST00000462482 SLC25A27O95847 323 aa18.48■□□□□ 0.55
SKA3-204ENST00000462482 LRRC26Q2I0M4 334 aa18.48■□□□□ 0.55
SKA3-204ENST00000462482 ABRAQ8N0Z2 381 aa18.48■□□□□ 0.55
SKA3-204ENST00000462482 GOPCQ9HD26 462 aa18.48■□□□□ 0.55
SKA3-204ENST00000462482 MYH1P12882 1939 aa18.47■□□□□ 0.55
SKA3-204ENST00000462482 KBTBD13C9JR72 458 aa18.47■□□□□ 0.55
SKA3-204ENST00000462482 FCER1AP12319 257 aa18.47■□□□□ 0.55
SKA3-204ENST00000462482 GPR153Q6NV75 609 aa18.47■□□□□ 0.55
SKA3-204ENST00000462482 C16orf86Q6ZW13 317 aa18.47■□□□□ 0.55
SKA3-204ENST00000462482 ATG4CQ96DT6 458 aa18.47■□□□□ 0.55
SKA3-204ENST00000462482 ECHDC1Q9NTX5 307 aa18.47■□□□□ 0.55
SKA3-204ENST00000462482 ARPP21Q9UBL0 812 aaPredicted RBP18.47■□□□□ 0.55
SKA3-204ENST00000462482 CDK5RAP2Q96SN8 1893 aa18.47■□□□□ 0.55
SKA3-204ENST00000462482 CYP2D7A0A087X1C5 515 aa18.46■□□□□ 0.55
SKA3-204ENST00000462482 MYCNP04198 464 aaPredicted RBP18.46■□□□□ 0.55
SKA3-204ENST00000462482 CYBAP13498 195 aa18.46■□□□□ 0.55
SKA3-204ENST00000462482 EEF2P13639 858 aaKnown RBP18.46■□□□□ 0.55
SKA3-204ENST00000462482 LRIT3Q3SXY7 679 aa18.46■□□□□ 0.55
SKA3-204ENST00000462482 SLFNL1Q499Z3 407 aa18.46■□□□□ 0.55
SKA3-204ENST00000462482 CLEC10AQ8IUN9 316 aa18.46■□□□□ 0.55
SKA3-204ENST00000462482 DOCK3Q8IZD9 2030 aa18.45■□□□□ 0.54
SKA3-204ENST00000462482 PLXNB2O15031 1838 aa18.45■□□□□ 0.54
SKA3-204ENST00000462482 COPB2P35606 906 aa18.45■□□□□ 0.54
SKA3-204ENST00000462482 ATN1P54259 1190 aaPredicted RBP18.45■□□□□ 0.54
SKA3-204ENST00000462482 KIAA1755Q5JYT7 1200 aa18.45■□□□□ 0.54
SKA3-204ENST00000462482 CTR9Q6PD62 1173 aa18.45■□□□□ 0.54
SKA3-204ENST00000462482 SIAH1Q8IUQ4 282 aa18.45■□□□□ 0.54
SKA3-204ENST00000462482 MKNK2Q9HBH9 465 aa18.45■□□□□ 0.54
SKA3-204ENST00000462482 MYO5AQ9Y4I1 1855 aaKnown RBP18.45■□□□□ 0.54
SKA3-204ENST00000462482 DDX60LQ5H9U9 1706 aaKnown RBP18.44■□□□□ 0.54
SKA3-204ENST00000462482 SEPT4O43236 478 aa18.44■□□□□ 0.54
SKA3-204ENST00000462482 SMARCA5O60264 1052 aaPredicted RBP18.44■□□□□ 0.54
SKA3-204ENST00000462482 MDM2Q00987 491 aaPredicted RBP18.44■□□□□ 0.54
SKA3-204ENST00000462482 KCTD2Q14681 263 aa18.44■□□□□ 0.54
SKA3-204ENST00000462482 LRRFIP1Q32MZ4 808 aaKnown RBP18.44■□□□□ 0.54
SKA3-204ENST00000462482 SLC17A8Q8NDX2 589 aa18.44■□□□□ 0.54
SKA3-204ENST00000462482 MMP19Q99542 508 aa18.44■□□□□ 0.54
SKA3-204ENST00000462482 PUS7LQ9H0K6 701 aaKnown RBP18.44■□□□□ 0.54
SKA3-204ENST00000462482 ZNF287Q9HBT7 754 aa18.44■□□□□ 0.54
SKA3-204ENST00000462482 COBLO75128 1261 aa18.43■□□□□ 0.54
SKA3-204ENST00000462482 GJC2Q5T442 439 aaPredicted RBP18.43■□□□□ 0.54
SKA3-204ENST00000462482 GIMAP6Q6P9H5 292 aa18.43■□□□□ 0.54
SKA3-204ENST00000462482 DEFB123Q8N688 67 aa18.43■□□□□ 0.54
SKA3-204ENST00000462482 TRPV1Q8NER1 839 aa18.43■□□□□ 0.54
SKA3-204ENST00000462482 CTDP1Q9Y5B0 961 aaPredicted RBP18.43■□□□□ 0.54
SKA3-204ENST00000462482 NAV1Q8NEY1 1877 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms