RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 LONRF3Q496Y0 759 aa23.2■■□□□ 1.3
CCM2-203ENST00000461377 STAG2Q8N3U4 1231 aa23.2■■□□□ 1.3
CCM2-203ENST00000461377 AOPEPQ8N6M6 819 aa23.2■■□□□ 1.3
CCM2-203ENST00000461377 RGPD3A6NKT7 1758 aaPredicted RBP23.2■■□□□ 1.3
CCM2-203ENST00000461377 RGPD4Q7Z3J3 1758 aa23.2■■□□□ 1.3
CCM2-203ENST00000461377 SPECC1Q5M775 1068 aa23.19■■□□□ 1.3
CCM2-203ENST00000461377 MSL1Q68DK7 614 aa23.19■■□□□ 1.3
CCM2-203ENST00000461377 METTL16Q86W50 562 aaKnown RBP23.19■■□□□ 1.3
CCM2-203ENST00000461377 FBXW7Q969H0 707 aa23.19■■□□□ 1.3
CCM2-203ENST00000461377 SH3GLB2Q9NR46 395 aa23.19■■□□□ 1.3
CCM2-203ENST00000461377 BMP15O95972 392 aa23.18■■□□□ 1.3
CCM2-203ENST00000461377 VEGFAP15692 232 aaPredicted RBP23.18■■□□□ 1.3
CCM2-203ENST00000461377 NLRP5P59047 1200 aa23.18■■□□□ 1.3
CCM2-203ENST00000461377 CNNM3Q8NE01 707 aa23.18■■□□□ 1.3
CCM2-203ENST00000461377 TMX4Q9H1E5 349 aaPredicted RBP23.18■■□□□ 1.3
CCM2-203ENST00000461377 BIN1O00499 593 aa23.18■■□□□ 1.3
CCM2-203ENST00000461377 DOK7Q18PE1 504 aa23.18■■□□□ 1.3
CCM2-203ENST00000461377 STX8Q9UNK0 236 aa23.18■■□□□ 1.3
CCM2-203ENST00000461377 MYH1P12882 1939 aa23.17■■□□□ 1.3
CCM2-203ENST00000461377 PALM3A6NDB9 673 aaPredicted RBP23.17■■□□□ 1.3
CCM2-203ENST00000461377 SLC35G1Q2M3R5 365 aa23.17■■□□□ 1.3
CCM2-203ENST00000461377 NOM1Q5C9Z4 860 aaKnown RBP23.17■■□□□ 1.3
CCM2-203ENST00000461377 PIBF1Q8WXW3 757 aa23.17■■□□□ 1.3
CCM2-203ENST00000461377 KCNF1Q9H3M0 494 aa23.17■■□□□ 1.3
CCM2-203ENST00000461377 WNT7AO00755 349 aa23.16■■□□□ 1.3
CCM2-203ENST00000461377 PNOCQ13519 176 aa23.16■■□□□ 1.3
CCM2-203ENST00000461377 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.16■■□□□ 1.3
CCM2-203ENST00000461377 MRFAP1L1Q96HT8 127 aa23.16■■□□□ 1.3
CCM2-203ENST00000461377 CSRNP2Q9H175 543 aa23.16■■□□□ 1.3
CCM2-203ENST00000461377 TTF2Q9UNY4 1162 aaKnown RBP23.16■■□□□ 1.3
CCM2-203ENST00000461377 F8W031 263 aaPredicted RBP23.16■■□□□ 1.3
CCM2-203ENST00000461377 CALML3P27482 149 aa23.16■■□□□ 1.3
CCM2-203ENST00000461377 TRAPPC10P48553 1259 aa23.16■■□□□ 1.3
CCM2-203ENST00000461377 NOVP48745 357 aa23.16■■□□□ 1.3
CCM2-203ENST00000461377 TTC38Q5R3I4 469 aa23.16■■□□□ 1.3
CCM2-203ENST00000461377 LZTS2Q9BRK4 669 aa23.16■■□□□ 1.3
CCM2-203ENST00000461377 MDM2Q00987 491 aaPredicted RBP23.15■■□□□ 1.3
CCM2-203ENST00000461377 C2CD5Q86YS7 1000 aa23.15■■□□□ 1.3
CCM2-203ENST00000461377 ZNF622Q969S3 477 aaKnown RBP eCLIP23.15■■□□□ 1.3
CCM2-203ENST00000461377 MXD3Q9BW11 206 aa23.15■■□□□ 1.3
CCM2-203ENST00000461377 STYK1Q6J9G0 422 aa23.14■■□□□ 1.3
CCM2-203ENST00000461377 FERMT2Q96AC1 680 aa23.14■■□□□ 1.3
CCM2-203ENST00000461377 PLIN4Q96Q06 1357 aa23.14■■□□□ 1.3
CCM2-203ENST00000461377 CYTH3O43739 400 aa23.14■■□□□ 1.29
CCM2-203ENST00000461377 GABPAQ06546 454 aa23.14■■□□□ 1.29
CCM2-203ENST00000461377 DRC7Q8IY82 874 aa23.14■■□□□ 1.29
CCM2-203ENST00000461377 CLIP2Q9UDT6 1046 aa23.14■■□□□ 1.29
CCM2-203ENST00000461377 HOOK1Q9UJC3 728 aaKnown RBP23.14■■□□□ 1.29
CCM2-203ENST00000461377 POLR2DO15514 142 aaKnown RBP23.13■■□□□ 1.29
CCM2-203ENST00000461377 PTGS1P23219 599 aa23.13■■□□□ 1.29
CCM2-203ENST00000461377 PICALMQ13492 652 aa23.13■■□□□ 1.29
CCM2-203ENST00000461377 HHIPL2Q6UWX4 724 aa23.13■■□□□ 1.29
CCM2-203ENST00000461377 PIK3AP1Q6ZUJ8 805 aa23.13■■□□□ 1.29
CCM2-203ENST00000461377 FOXP4Q8IVH2 680 aaPredicted RBP23.13■■□□□ 1.29
CCM2-203ENST00000461377 BLIDQ8IZY5 108 aa23.13■■□□□ 1.29
CCM2-203ENST00000461377 GPKOWQ92917 476 aaPredicted RBP eCLIP23.13■■□□□ 1.29
CCM2-203ENST00000461377 DDX4Q9NQI0 724 aaKnown RBP23.13■■□□□ 1.29
CCM2-203ENST00000461377 G3V3G9 751 aa23.12■■□□□ 1.29
CCM2-203ENST00000461377 ADAMTS3O15072 1205 aa23.12■■□□□ 1.29
CCM2-203ENST00000461377 TOP1P11387 765 aaKnown RBP23.12■■□□□ 1.29
CCM2-203ENST00000461377 ZNF174Q15697 407 aa23.12■■□□□ 1.29
CCM2-203ENST00000461377 DCAF8Q5TAQ9 597 aa23.12■■□□□ 1.29
CCM2-203ENST00000461377 CCDC186Q7Z3E2 898 aa23.12■■□□□ 1.29
CCM2-203ENST00000461377 PODNQ7Z5L7 613 aa23.12■■□□□ 1.29
CCM2-203ENST00000461377 CEP95Q96GE4 821 aa23.12■■□□□ 1.29
CCM2-203ENST00000461377 SPZ1Q9BXG8 430 aa23.12■■□□□ 1.29
CCM2-203ENST00000461377 SERTAD1Q9UHV2 236 aa23.12■■□□□ 1.29
CCM2-203ENST00000461377 PCDHA4Q9UN74 947 aa23.12■■□□□ 1.29
CCM2-203ENST00000461377 PCDHA5Q9Y5H7 936 aa23.12■■□□□ 1.29
CCM2-203ENST00000461377 IKBKBO14920 756 aa23.12■■□□□ 1.29
CCM2-203ENST00000461377 FOXN1O15353 648 aa23.12■■□□□ 1.29
CCM2-203ENST00000461377 ATP2C1P98194 919 aaPredicted RBP23.12■■□□□ 1.29
CCM2-203ENST00000461377 NCAPHQ15003 741 aa23.12■■□□□ 1.29
CCM2-203ENST00000461377 USP49Q70CQ1 688 aa23.12■■□□□ 1.29
CCM2-203ENST00000461377 FAM177A1Q8N128 213 aaPredicted RBP23.12■■□□□ 1.29
CCM2-203ENST00000461377 USP40Q9NVE5 1235 aa23.12■■□□□ 1.29
CCM2-203ENST00000461377 SMTNL1A8MU46 457 aa23.11■■□□□ 1.29
CCM2-203ENST00000461377 H0YIN7 160 aa23.11■■□□□ 1.29
CCM2-203ENST00000461377 ACTN4O43707 911 aaKnown RBP23.11■■□□□ 1.29
CCM2-203ENST00000461377 POSTNQ15063 836 aa23.11■■□□□ 1.29
CCM2-203ENST00000461377 WWC2Q6AWC2 1192 aa23.11■■□□□ 1.29
CCM2-203ENST00000461377 TYW1BQ6NUM6 668 aa23.11■■□□□ 1.29
CCM2-203ENST00000461377 DAGLBQ8NCG7 672 aa23.11■■□□□ 1.29
CCM2-203ENST00000461377 NRBP1Q9UHY1 535 aa23.11■■□□□ 1.29
CCM2-203ENST00000461377 KLRF2D3W0D1 207 aa23.1■■□□□ 1.29
CCM2-203ENST00000461377 M0R2N6 131 aa23.1■■□□□ 1.29
CCM2-203ENST00000461377 SCNN1DP51172 638 aa23.1■■□□□ 1.29
CCM2-203ENST00000461377 ISM2Q6H9L7 571 aa23.1■■□□□ 1.29
CCM2-203ENST00000461377 KANK3Q6NY19 840 aa23.1■■□□□ 1.29
CCM2-203ENST00000461377 CCDC148Q8NFR7 591 aa23.1■■□□□ 1.29
CCM2-203ENST00000461377 TEKT1Q969V4 418 aa23.1■■□□□ 1.29
CCM2-203ENST00000461377 ANO8Q9HCE9 1232 aaPredicted RBP23.1■■□□□ 1.29
CCM2-203ENST00000461377 MTMR7Q9Y216 660 aa23.1■■□□□ 1.29
CCM2-203ENST00000461377 STXBP3O00186 592 aa23.1■■□□□ 1.29
CCM2-203ENST00000461377 PARP1P09874 1014 aaKnown RBP23.1■■□□□ 1.29
CCM2-203ENST00000461377 NT5DC1Q5TFE4 455 aa23.1■■□□□ 1.29
CCM2-203ENST00000461377 GALNT17Q6IS24 598 aa23.1■■□□□ 1.29
CCM2-203ENST00000461377 APOBEC3HQ6NTF7 200 aaKnown RBP23.1■■□□□ 1.29
CCM2-203ENST00000461377 CDC42EP5Q6NZY7 148 aa23.1■■□□□ 1.29
CCM2-203ENST00000461377 NAP1L5Q96NT1 182 aaPredicted RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms