RNA–Protein interactions for RNA: ENST00000461173.5

DHFR2-203, Transcript of dihydrofolate reductase 2, humanhuman

TSL 1 (best)

Gene DHFR2, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-203ENST00000461173 FANCLQ9NW38 375 aa11.25□□□□□ -0.61
DHFR2-203ENST00000461173 GOLGA6L9A6NEM1 432 aa11.24□□□□□ -0.61
DHFR2-203ENST00000461173 TSPY2A6NKD2 308 aa11.24□□□□□ -0.61
DHFR2-203ENST00000461173 ARHGAP6O43182 974 aa11.24□□□□□ -0.61
DHFR2-203ENST00000461173 PRDM1O75626 825 aa11.24□□□□□ -0.61
DHFR2-203ENST00000461173 TRAPPC3LQ5T215 181 aa11.24□□□□□ -0.61
DHFR2-203ENST00000461173 ZNF804AQ7Z570 1209 aa11.24□□□□□ -0.61
DHFR2-203ENST00000461173 PDCL2Q8N4E4 241 aa11.24□□□□□ -0.61
DHFR2-203ENST00000461173 PPP1R13BQ96KQ4 1090 aa11.24□□□□□ -0.61
DHFR2-203ENST00000461173 L2HGDHQ9H9P8 463 aa11.24□□□□□ -0.61
DHFR2-203ENST00000461173 NFE2L3Q9Y4A8 694 aa11.24□□□□□ -0.61
DHFR2-203ENST00000461173 USP27XA6NNY8 438 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 SMIM22K7EJ46 135 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 SMARCA1P28370 1054 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 RFC4P35249 363 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 LONP1P36776 959 aaKnown RBP11.23□□□□□ -0.61
DHFR2-203ENST00000461173 GRM4Q14833 912 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 CRY2Q49AN0 593 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 SPECC1Q5M775 1068 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 SPATA1Q5VX52 437 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 IQUBQ8NA54 791 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 SYMPKQ92797 1274 aaKnown RBP11.23□□□□□ -0.61
DHFR2-203ENST00000461173 FAM163AQ96GL9 167 aaPredicted RBP11.23□□□□□ -0.61
DHFR2-203ENST00000461173 PAGE5Q96GU1 130 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 ERO1AQ96HE7 468 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 CTAGE1Q96RT6 745 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 KAT14Q9H8E8 782 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 MCM9Q9NXL9 1143 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 TFCP2L1Q9NZI6 479 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 LAD1O00515 517 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 FOXN1O15353 648 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 ZSCAN12O43309 604 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 ONECUT3O60422 494 aaPredicted RBP11.23□□□□□ -0.61
DHFR2-203ENST00000461173 STX10O60499 249 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 MYL1P05976 194 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 PRR29P0C7W0 189 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 PLCG2P16885 1265 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 NLRP5P59047 1200 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 NCBP1Q09161 790 aaKnown RBP11.23□□□□□ -0.61
DHFR2-203ENST00000461173 DPYDQ12882 1025 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 EARS2Q5JPH6 523 aaKnown RBP11.23□□□□□ -0.61
DHFR2-203ENST00000461173 SPECC1LQ69YQ0 1117 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 ISM2Q6H9L7 571 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 CCDC148Q8NFR7 591 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 DPF2Q92785 391 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 C8orf37Q96NL8 207 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 INTS13Q9NVM9 706 aa11.23□□□□□ -0.61
DHFR2-203ENST00000461173 TNRC6CQ9HCJ0 1690 aaKnown RBP11.23□□□□□ -0.61
DHFR2-203ENST00000461173 PHLPP2Q6ZVD8 1323 aa11.22□□□□□ -0.61
DHFR2-203ENST00000461173 A0A1B0GTH6 734 aa11.22□□□□□ -0.61
DHFR2-203ENST00000461173 M0R2N6 131 aa11.22□□□□□ -0.61
DHFR2-203ENST00000461173 IL1R1P14778 569 aa11.22□□□□□ -0.61
DHFR2-203ENST00000461173 ATP2B4P23634 1241 aa11.22□□□□□ -0.61
DHFR2-203ENST00000461173 FMR1Q06787 632 aaKnown RBP eCLIP11.22□□□□□ -0.61
DHFR2-203ENST00000461173 PTGDRQ13258 359 aa11.22□□□□□ -0.61
DHFR2-203ENST00000461173 CUL4BQ13620 913 aa11.22□□□□□ -0.61
DHFR2-203ENST00000461173 NR1I3Q14994 352 aa11.22□□□□□ -0.61
DHFR2-203ENST00000461173 E2F4Q16254 413 aa11.22□□□□□ -0.61
DHFR2-203ENST00000461173 TMC4Q7Z404 712 aa11.22□□□□□ -0.61
DHFR2-203ENST00000461173 TXNRD3Q86VQ6 643 aa11.22□□□□□ -0.61
DHFR2-203ENST00000461173 SLF2Q8IX21 1173 aa11.22□□□□□ -0.61
DHFR2-203ENST00000461173 CNBD1Q8NA66 436 aa11.22□□□□□ -0.61
DHFR2-203ENST00000461173 FEZ1Q99689 392 aa11.22□□□□□ -0.61
DHFR2-203ENST00000461173 CGNQ9P2M7 1197 aaKnown RBP11.22□□□□□ -0.61
DHFR2-203ENST00000461173 PCDHA4Q9UN74 947 aa11.22□□□□□ -0.61
DHFR2-203ENST00000461173 GTPBP6O43824 516 aaPredicted RBP11.21□□□□□ -0.61
DHFR2-203ENST00000461173 USP5P45974 858 aa11.21□□□□□ -0.61
DHFR2-203ENST00000461173 NOVP48745 357 aa11.21□□□□□ -0.61
DHFR2-203ENST00000461173 ETF1P62495 437 aaKnown RBP11.21□□□□□ -0.61
DHFR2-203ENST00000461173 TFAP4Q01664 338 aa11.21□□□□□ -0.61
DHFR2-203ENST00000461173 ORC2Q13416 577 aaPredicted RBP11.21□□□□□ -0.61
DHFR2-203ENST00000461173 NFIXQ14938 502 aa11.21□□□□□ -0.61
DHFR2-203ENST00000461173 FAM47AQ5JRC9 791 aa11.21□□□□□ -0.61
DHFR2-203ENST00000461173 USP49Q70CQ1 688 aa11.21□□□□□ -0.61
DHFR2-203ENST00000461173 PTF1AQ7RTS3 328 aa11.21□□□□□ -0.61
DHFR2-203ENST00000461173 BLIDQ8IZY5 108 aa11.21□□□□□ -0.61
DHFR2-203ENST00000461173 PNMA1Q8ND90 353 aa11.21□□□□□ -0.61
DHFR2-203ENST00000461173 DHX58Q96C10 678 aa11.21□□□□□ -0.61
DHFR2-203ENST00000461173 SRRTQ9BXP5 876 aaKnown RBP11.21□□□□□ -0.61
DHFR2-203ENST00000461173 IL17RBQ9NRM6 502 aa11.21□□□□□ -0.61
DHFR2-203ENST00000461173 ANKIB1Q9P2G1 1089 aa11.21□□□□□ -0.61
DHFR2-203ENST00000461173 USP21Q9UK80 565 aa11.21□□□□□ -0.61
DHFR2-203ENST00000461173 SBF2Q86WG5 1849 aa11.21□□□□□ -0.61
DHFR2-203ENST00000461173 A0A087X0B3 334 aa11.21□□□□□ -0.62
DHFR2-203ENST00000461173 GPR75-ASB3A0A0A6YYF3 556 aa11.21□□□□□ -0.62
DHFR2-203ENST00000461173 PALM3A6NDB9 673 aaPredicted RBP11.21□□□□□ -0.62
DHFR2-203ENST00000461173 FAM205CA6NFA0 338 aa11.21□□□□□ -0.62
DHFR2-203ENST00000461173 LRRC10BA6NIK2 292 aa11.21□□□□□ -0.62
DHFR2-203ENST00000461173 BBOX1O75936 387 aa11.21□□□□□ -0.62
DHFR2-203ENST00000461173 SLU7O95391 586 aaKnown RBP11.21□□□□□ -0.62
DHFR2-203ENST00000461173 CYP2D6P10635 497 aa11.21□□□□□ -0.62
DHFR2-203ENST00000461173 CDK11BP21127 795 aaKnown RBP11.21□□□□□ -0.62
DHFR2-203ENST00000461173 KCNQ4P56696 695 aa11.21□□□□□ -0.62
DHFR2-203ENST00000461173 ZNF174Q15697 407 aa11.21□□□□□ -0.62
DHFR2-203ENST00000461173 CCDC93Q567U6 631 aa11.21□□□□□ -0.62
DHFR2-203ENST00000461173 CDKAL1Q5VV42 579 aa11.21□□□□□ -0.62
DHFR2-203ENST00000461173 TMEM139Q8IV31 216 aa11.21□□□□□ -0.62
DHFR2-203ENST00000461173 C4orf32Q8N8J7 132 aa11.21□□□□□ -0.62
DHFR2-203ENST00000461173 TBC1D22AQ8WUA7 517 aa11.21□□□□□ -0.62
DHFR2-203ENST00000461173 EPSTI1Q96J88 318 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms