RNA–Protein interactions for RNA: ENST00000461074.1

MCF2L2-205, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 7,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-205ENST00000461074 LCMT1Q9UIC8 334 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 GJA3Q9Y6H8 435 aa9.35□□□□□ -0.91
MCF2L2-205ENST00000461074 PSMC4P43686 418 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 AK8Q96MA6 479 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 ARMT1Q9H993 441 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 V9GY48 417 aaPredicted RBP9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 EXOC3O60645 756 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 GAS7O60861 476 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 EIF4A1P60842 406 aaKnown RBP9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 SPATS2Q86XZ4 545 aaKnown RBP9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 CALR3Q96L12 384 aaKnown RBP9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 I3L4J1 428 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 TNNC2P02585 160 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 RASSF2P50749 326 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 TPD52P55327 224 aaPredicted RBP9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 ARID5AQ03989 594 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 ASPRV1Q53RT3 343 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 CABP7Q86V35 215 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 TYW1Q9NV66 732 aaKnown RBP9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 THRAP3Q9Y2W1 955 aaKnown RBP9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 SH3BP5O60239 455 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 HADHQ16836 314 aaKnown RBP9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 HERC4Q5GLZ8 1057 aaPredicted RBP9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 DEPTORQ8TB45 409 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 JARID2Q92833 1246 aaPredicted RBP9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 NEURL1BA8MQ27 555 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 POLR2MP0CAP2 368 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 PPARAQ07869 468 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 ODR4Q5SWX8 454 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 NRBP2Q9NSY0 501 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 LMNB2Q03252 620 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 SEPT2Q15019 361 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 TTLL7Q6ZT98 887 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 RSPH3Q86UC2 560 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 MYCT1Q8N699 235 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 SEC62Q99442 399 aaKnown RBP9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 CARD14Q9BXL6 1004 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 TRPC5Q9UL62 973 aaPredicted RBP9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 ABCC4O15439 1325 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 ZMYM6O95789 1325 aa9.34□□□□□ -0.91
MCF2L2-205ENST00000461074 LONP1P36776 959 aaKnown RBP9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 NCAPH2Q6IBW4 605 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 PHACTR3Q96KR7 559 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 HAUS7Q99871 368 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 VCX3BQ9H321 246 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 MRPL44Q9H9J2 332 aaKnown RBP9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 COL4A3BPQ9Y5P4 624 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 ARHGAP31Q2M1Z3 1444 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 IL6STP40189 918 aaPredicted RBP9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 YARSP54577 528 aaKnown RBP9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 CBX1P83916 185 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 SLC4A8Q2Y0W8 1093 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 TRIM58Q8NG06 486 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 LARP6Q9BRS8 491 aaKnown RBP9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 SNX14Q9Y5W7 946 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 ZEB2O60315 1214 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 ZNF189O75820 626 aaPredicted RBP9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 GAP43P17677 238 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 GJC1P36383 396 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 ZNF445P59923 1031 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 ATP11AP98196 1134 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 ALCAMQ13740 583 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 MCM6Q14566 821 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 TRMT1LQ7Z2T5 733 aaKnown RBP9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 HELBQ8NG08 1087 aaPredicted RBP9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 SSH3Q8TE77 659 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 NACA2Q9H009 215 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 IPO11Q9UI26 975 aaKnown RBP9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 XDHP47989 1333 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 ZNF532Q9HCE3 1301 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 PER1O15534 1290 aaPredicted RBP9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 PPIP5K2O43314 1243 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 ARHGAP25P42331 645 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 APBA1Q02410 837 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 ADALQ6DHV7 355 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 MIER3Q7Z3K6 550 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 DBNDD2Q9BQY9 259 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 LARSQ9P2J5 1176 aaKnown RBP9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 ZSCAN10Q96SZ4 725 aaPredicted RBP9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 TEKT3Q9BXF9 490 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 OGFRQ9NZT2 677 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 ZBTB21Q9ULJ3 1066 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 ZNF233A6NK53 670 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 PPFIA4O75335 1185 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 XRCC5P13010 732 aaKnown RBP9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 KRT10P13645 584 aa9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 SMCR8Q8TEV9 937 aaPredicted RBP9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 ADD3Q9UEY8 706 aaKnown RBP9.33□□□□□ -0.92
MCF2L2-205ENST00000461074 ZNF202O95125 648 aa9.32□□□□□ -0.92
MCF2L2-205ENST00000461074 CAPN2P17655 700 aa9.32□□□□□ -0.92
MCF2L2-205ENST00000461074 MNAT1P51948 309 aa9.32□□□□□ -0.92
MCF2L2-205ENST00000461074 SAP30BPQ9UHR5 308 aaKnown RBP9.32□□□□□ -0.92
MCF2L2-205ENST00000461074 WWC3Q9ULE0 1092 aa9.32□□□□□ -0.92
MCF2L2-205ENST00000461074 HECW2Q9P2P5 1572 aa9.32□□□□□ -0.92
MCF2L2-205ENST00000461074 RPS6KA1Q15418 735 aa9.32□□□□□ -0.92
MCF2L2-205ENST00000461074 KRT40Q6A162 431 aa9.32□□□□□ -0.92
MCF2L2-205ENST00000461074 CCDC62Q6P9F0 684 aa9.32□□□□□ -0.92
MCF2L2-205ENST00000461074 GTF3C6Q969F1 213 aa9.32□□□□□ -0.92
MCF2L2-205ENST00000461074 USP19O94966 1318 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms