RNA–Protein interactions for RNA: ENST00000460834.1

LST1-218, leukocyte specific transcript 1, humanhuman

TSL 3

Gene LST1, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-218ENST00000460834 ERVK-9P63128 1117 aa22.72■■□□□ 1.23
LST1-218ENST00000460834 ERVK-24P63145 666 aa22.72■■□□□ 1.23
LST1-218ENST00000460834 IRF5Q13568 498 aa22.72■■□□□ 1.23
LST1-218ENST00000460834 MCMDC2Q4G0Z9 681 aa22.72■■□□□ 1.23
LST1-218ENST00000460834 LBX2Q6XYB7 198 aa22.72■■□□□ 1.23
LST1-218ENST00000460834 RILPL2Q969X0 211 aa22.72■■□□□ 1.23
LST1-218ENST00000460834 VCPKMTQ9H867 229 aa22.72■■□□□ 1.23
LST1-218ENST00000460834 MKNK2Q9HBH9 465 aa22.72■■□□□ 1.23
LST1-218ENST00000460834 ARHGEF10LQ9HCE6 1279 aa22.72■■□□□ 1.23
LST1-218ENST00000460834 TACC3Q9Y6A5 838 aa22.72■■□□□ 1.23
LST1-218ENST00000460834 COL11A1P12107 1806 aaPredicted RBP22.71■■□□□ 1.23
LST1-218ENST00000460834 SPDYE16A6NNV3 312 aaPredicted RBP22.71■■□□□ 1.23
LST1-218ENST00000460834 PRDM1O75626 825 aa22.71■■□□□ 1.23
LST1-218ENST00000460834 SDSP20132 328 aa22.71■■□□□ 1.23
LST1-218ENST00000460834 PPARAQ07869 468 aa22.71■■□□□ 1.23
LST1-218ENST00000460834 ALX1Q15699 326 aa22.71■■□□□ 1.23
LST1-218ENST00000460834 GTF3C2Q8WUA4 911 aaPredicted RBP22.71■■□□□ 1.23
LST1-218ENST00000460834 COA7Q96BR5 231 aa22.71■■□□□ 1.23
LST1-218ENST00000460834 NAPBQ9H115 298 aa22.71■■□□□ 1.23
LST1-218ENST00000460834 PORCNQ9H237 461 aa22.71■■□□□ 1.23
LST1-218ENST00000460834 BTBD7Q9P203 1132 aa22.71■■□□□ 1.23
LST1-218ENST00000460834 RABGAP1Q9Y3P9 1069 aa22.71■■□□□ 1.23
LST1-218ENST00000460834 MTFR1Q15390 333 aa22.7■■□□□ 1.22
LST1-218ENST00000460834 ZNF589Q86UQ0 364 aaPredicted RBP22.7■■□□□ 1.22
LST1-218ENST00000460834 PAGR1Q9BTK6 254 aa22.7■■□□□ 1.22
LST1-218ENST00000460834 ADCY3O60266 1144 aa22.69■■□□□ 1.22
LST1-218ENST00000460834 MYCP01106 439 aaPredicted RBP22.69■■□□□ 1.22
LST1-218ENST00000460834 ELNP15502 786 aa22.69■■□□□ 1.22
LST1-218ENST00000460834 EN2P19622 333 aaPredicted RBP22.69■■□□□ 1.22
LST1-218ENST00000460834 COG2Q14746 738 aa22.69■■□□□ 1.22
LST1-218ENST00000460834 SPICE1Q8N0Z3 855 aa22.69■■□□□ 1.22
LST1-218ENST00000460834 PXYLP1Q8TE99 480 aa22.69■■□□□ 1.22
LST1-218ENST00000460834 LPAR1Q92633 364 aa22.69■■□□□ 1.22
LST1-218ENST00000460834 SH2D4AQ9H788 454 aa22.69■■□□□ 1.22
LST1-218ENST00000460834 INCENPQ9NQS7 918 aa22.69■■□□□ 1.22
LST1-218ENST00000460834 NYAP2Q9P242 653 aa22.69■■□□□ 1.22
LST1-218ENST00000460834 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.69■■□□□ 1.22
LST1-218ENST00000460834 ATP2B2Q01814 1243 aa22.68■■□□□ 1.22
LST1-218ENST00000460834 CTDSPL2Q05D32 466 aa22.68■■□□□ 1.22
LST1-218ENST00000460834 ZNF444Q8N0Y2 327 aaPredicted RBP22.68■■□□□ 1.22
LST1-218ENST00000460834 SLAIN1Q8ND83 568 aa22.68■■□□□ 1.22
LST1-218ENST00000460834 ANAPC4Q9UJX5 808 aa22.68■■□□□ 1.22
LST1-218ENST00000460834 ZNFX1Q9P2E3 1918 aaKnown RBP22.67■■□□□ 1.22
LST1-218ENST00000460834 FGAP02671 866 aa22.67■■□□□ 1.22
LST1-218ENST00000460834 HSPD1P10809 573 aaKnown RBP22.67■■□□□ 1.22
LST1-218ENST00000460834 DSG3P32926 999 aa22.67■■□□□ 1.22
LST1-218ENST00000460834 NEDD1Q8NHV4 660 aa22.67■■□□□ 1.22
LST1-218ENST00000460834 USP6NLQ92738 828 aa22.67■■□□□ 1.22
LST1-218ENST00000460834 TMEM106CQ9BVX2 250 aa22.67■■□□□ 1.22
LST1-218ENST00000460834 HOXC10Q9NYD6 342 aa22.67■■□□□ 1.22
LST1-218ENST00000460834 MAPK4P31152 587 aa22.66■■□□□ 1.22
LST1-218ENST00000460834 MKL1Q969V6 931 aa22.66■■□□□ 1.22
LST1-218ENST00000460834 TANGO6Q9C0B7 1094 aa22.66■■□□□ 1.22
LST1-218ENST00000460834 ZNF287Q9HBT7 754 aa22.66■■□□□ 1.22
LST1-218ENST00000460834 PLIN4Q96Q06 1357 aa22.65■■□□□ 1.22
LST1-218ENST00000460834 CCDC171Q6TFL3 1326 aa22.65■■□□□ 1.22
LST1-218ENST00000460834 WDR46O15213 610 aaKnown RBP22.65■■□□□ 1.22
LST1-218ENST00000460834 FGRP09769 529 aa22.65■■□□□ 1.22
LST1-218ENST00000460834 PDE4BQ07343 736 aa22.65■■□□□ 1.22
LST1-218ENST00000460834 FAM47AQ5JRC9 791 aa22.65■■□□□ 1.22
LST1-218ENST00000460834 MORN1Q5T089 497 aa22.65■■□□□ 1.22
LST1-218ENST00000460834 GPR142Q7Z601 462 aa22.65■■□□□ 1.22
LST1-218ENST00000460834 CEP95Q96GE4 821 aa22.65■■□□□ 1.22
LST1-218ENST00000460834 MTMR4Q9NYA4 1195 aa22.65■■□□□ 1.22
LST1-218ENST00000460834 ADAMTS5Q9UNA0 930 aa22.65■■□□□ 1.22
LST1-218ENST00000460834 PDE4DIPQ5VU43 2346 aa22.64■■□□□ 1.22
LST1-218ENST00000460834 BRCA2P51587 3418 aa22.64■■□□□ 1.22
LST1-218ENST00000460834 SLC3A2P08195 630 aaKnown RBP22.64■■□□□ 1.21
LST1-218ENST00000460834 CCL5P13501 91 aa22.64■■□□□ 1.21
LST1-218ENST00000460834 GSPT1P15170 499 aaKnown RBP22.64■■□□□ 1.21
LST1-218ENST00000460834 TFAP4Q01664 338 aa22.64■■□□□ 1.21
LST1-218ENST00000460834 TTC22Q5TAA0 569 aa22.64■■□□□ 1.21
LST1-218ENST00000460834 PLEKHH3Q7Z736 793 aa22.64■■□□□ 1.21
LST1-218ENST00000460834 CLIP2Q9UDT6 1046 aa22.64■■□□□ 1.21
LST1-218ENST00000460834 INHAP05111 366 aa22.63■■□□□ 1.21
LST1-218ENST00000460834 ATG4CQ96DT6 458 aa22.63■■□□□ 1.21
LST1-218ENST00000460834 UNC93B1Q9H1C4 597 aa22.63■■□□□ 1.21
LST1-218ENST00000460834 GOPCQ9HD26 462 aa22.63■■□□□ 1.21
LST1-218ENST00000460834 FBXO28Q9NVF7 368 aa22.63■■□□□ 1.21
LST1-218ENST00000460834 BIN2Q9UBW5 565 aaPredicted RBP22.63■■□□□ 1.21
LST1-218ENST00000460834 ZMYM6O95789 1325 aa22.62■■□□□ 1.21
LST1-218ENST00000460834 F5H6K3 240 aa22.62■■□□□ 1.21
LST1-218ENST00000460834 FLOT1O75955 427 aa22.62■■□□□ 1.21
LST1-218ENST00000460834 CYP2B6P20813 491 aa22.62■■□□□ 1.21
LST1-218ENST00000460834 UBXN2AP68543 259 aa22.62■■□□□ 1.21
LST1-218ENST00000460834 KLRC3Q07444 240 aa22.62■■□□□ 1.21
LST1-218ENST00000460834 FAM83BQ5T0W9 1011 aa22.62■■□□□ 1.21
LST1-218ENST00000460834 CWC27Q6UX04 472 aaKnown RBP22.62■■□□□ 1.21
LST1-218ENST00000460834 NUDT12Q9BQG2 462 aa22.62■■□□□ 1.21
LST1-218ENST00000460834 MOV10L1Q9BXT6 1211 aaKnown RBP22.62■■□□□ 1.21
LST1-218ENST00000460834 NBPF3Q9H094 633 aa22.62■■□□□ 1.21
LST1-218ENST00000460834 IL17RBQ9NRM6 502 aa22.62■■□□□ 1.21
LST1-218ENST00000460834 LAMA4Q16363 1823 aa22.61■■□□□ 1.21
LST1-218ENST00000460834 ORC4O43929 436 aa22.61■■□□□ 1.21
LST1-218ENST00000460834 TSPY3P0CV98 308 aa22.61■■□□□ 1.21
LST1-218ENST00000460834 TSPY8P0CW00 308 aa22.61■■□□□ 1.21
LST1-218ENST00000460834 CCNA1P78396 465 aa22.61■■□□□ 1.21
LST1-218ENST00000460834 TRIM32Q13049 653 aa22.61■■□□□ 1.21
LST1-218ENST00000460834 SHISA4Q96DD7 197 aa22.61■■□□□ 1.21
LST1-218ENST00000460834 NUP88Q99567 741 aaPredicted RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms