RNA–Protein interactions for RNA: ENST00000460625.1

UPK1B-202, Transcript of uroplakin 1B, humanhuman

TSL 1 (best) BASIC

Gene UPK1B, Length 1,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1B-202ENST00000460625 GOLGA8HP0CJ92 632 aa12.65□□□□□ -0.38
UPK1B-202ENST00000460625 TNNI2P48788 182 aa12.65□□□□□ -0.38
UPK1B-202ENST00000460625 ABCB5Q2M3G0 1257 aa12.65□□□□□ -0.38
UPK1B-202ENST00000460625 C8orf76Q96K31 380 aa12.65□□□□□ -0.38
UPK1B-202ENST00000460625 KIF3AQ9Y496 699 aa12.65□□□□□ -0.38
UPK1B-202ENST00000460625 USP17L5A8MUK1 530 aa12.64□□□□□ -0.39
UPK1B-202ENST00000460625 GH2P01242 217 aa12.64□□□□□ -0.39
UPK1B-202ENST00000460625 ATP2B2Q01814 1243 aa12.64□□□□□ -0.39
UPK1B-202ENST00000460625 RESTQ13127 1097 aa12.64□□□□□ -0.39
UPK1B-202ENST00000460625 PKN1Q16512 942 aa12.64□□□□□ -0.39
UPK1B-202ENST00000460625 USP17L2Q6R6M4 530 aa12.64□□□□□ -0.39
UPK1B-202ENST00000460625 FBXO18Q8NFZ0 1043 aa12.64□□□□□ -0.39
UPK1B-202ENST00000460625 SHISA4Q96DD7 197 aa12.64□□□□□ -0.39
UPK1B-202ENST00000460625 MAP3K14Q99558 947 aa12.64□□□□□ -0.39
UPK1B-202ENST00000460625 DEFB129Q9H1M3 183 aa12.64□□□□□ -0.39
UPK1B-202ENST00000460625 CPVLQ9H3G5 476 aa12.64□□□□□ -0.39
UPK1B-202ENST00000460625 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.64□□□□□ -0.39
UPK1B-202ENST00000460625 PALM3A6NDB9 673 aaPredicted RBP12.64□□□□□ -0.39
UPK1B-202ENST00000460625 TBC1D12O60347 775 aa12.64□□□□□ -0.39
UPK1B-202ENST00000460625 EEF2P13639 858 aaKnown RBP12.64□□□□□ -0.39
UPK1B-202ENST00000460625 PDIA4P13667 645 aaKnown RBP12.64□□□□□ -0.39
UPK1B-202ENST00000460625 TNFAIP1Q13829 316 aa12.64□□□□□ -0.39
UPK1B-202ENST00000460625 PRAMEF18Q5VWM3 479 aa12.64□□□□□ -0.39
UPK1B-202ENST00000460625 TMEM179Q6ZVK1 233 aa12.64□□□□□ -0.39
UPK1B-202ENST00000460625 TRIM22Q8IYM9 498 aa12.64□□□□□ -0.39
UPK1B-202ENST00000460625 RNF26Q9BY78 433 aaPredicted RBP12.64□□□□□ -0.39
UPK1B-202ENST00000460625 GDPD2Q9HCC8 539 aa12.64□□□□□ -0.39
UPK1B-202ENST00000460625 GGA3Q9NZ52 723 aa12.64□□□□□ -0.39
UPK1B-202ENST00000460625 V9GY48 417 aaPredicted RBP12.64□□□□□ -0.39
UPK1B-202ENST00000460625 SOCS7O14512 581 aa12.63□□□□□ -0.39
UPK1B-202ENST00000460625 PRPF3O43395 683 aaKnown RBP12.63□□□□□ -0.39
UPK1B-202ENST00000460625 CYTH3O43739 400 aa12.63□□□□□ -0.39
UPK1B-202ENST00000460625 DEXIO95424 95 aa12.63□□□□□ -0.39
UPK1B-202ENST00000460625 PDHBP11177 359 aa12.63□□□□□ -0.39
UPK1B-202ENST00000460625 VEGFAP15692 232 aaPredicted RBP12.63□□□□□ -0.39
UPK1B-202ENST00000460625 KIF5BP33176 963 aa12.63□□□□□ -0.39
UPK1B-202ENST00000460625 MAP3K10Q02779 954 aa12.63□□□□□ -0.39
UPK1B-202ENST00000460625 DNM1Q05193 864 aaKnown RBP12.63□□□□□ -0.39
UPK1B-202ENST00000460625 NBPF12Q5TAG4 269 aaPredicted RBP12.63□□□□□ -0.39
UPK1B-202ENST00000460625 PIBF1Q8WXW3 757 aa12.63□□□□□ -0.39
UPK1B-202ENST00000460625 KANSL2Q9H9L4 492 aa12.63□□□□□ -0.39
UPK1B-202ENST00000460625 CNPY2Q9Y2B0 182 aa12.63□□□□□ -0.39
UPK1B-202ENST00000460625 FRMPD2Q68DX3 1309 aaPredicted RBP12.63□□□□□ -0.39
UPK1B-202ENST00000460625 ICA1Q05084 483 aa12.62□□□□□ -0.39
UPK1B-202ENST00000460625 KRT40Q6A162 431 aa12.62□□□□□ -0.39
UPK1B-202ENST00000460625 MYH15Q9Y2K3 1946 aa12.62□□□□□ -0.39
UPK1B-202ENST00000460625 PHF20L1A8MW92 1017 aa12.62□□□□□ -0.39
UPK1B-202ENST00000460625 KIF28PB7ZC32 967 aa12.62□□□□□ -0.39
UPK1B-202ENST00000460625 KLRF2D3W0D1 207 aa12.62□□□□□ -0.39
UPK1B-202ENST00000460625 GRIN3BO60391 1043 aa12.62□□□□□ -0.39
UPK1B-202ENST00000460625 PARP1P09874 1014 aaKnown RBP12.62□□□□□ -0.39
UPK1B-202ENST00000460625 SNHG28P0DPA3 235 aa12.62□□□□□ -0.39
UPK1B-202ENST00000460625 LMOD1P29536 600 aaPredicted RBP12.62□□□□□ -0.39
UPK1B-202ENST00000460625 DLK2Q6UY11 383 aa12.62□□□□□ -0.39
UPK1B-202ENST00000460625 MKL1Q969V6 931 aa12.62□□□□□ -0.39
UPK1B-202ENST00000460625 ADARB2Q9NS39 739 aaKnown RBP12.62□□□□□ -0.39
UPK1B-202ENST00000460625 NYAP2Q9P242 653 aa12.62□□□□□ -0.39
UPK1B-202ENST00000460625 ZBTB21Q9ULJ3 1066 aa12.62□□□□□ -0.39
UPK1B-202ENST00000460625 KCNJ14Q9UNX9 436 aa12.62□□□□□ -0.39
UPK1B-202ENST00000460625 A0A1W2PRG0 241 aa12.61□□□□□ -0.39
UPK1B-202ENST00000460625 DDX11L8A8MPP1 907 aa12.61□□□□□ -0.39
UPK1B-202ENST00000460625 PRPF40AO75400 957 aaKnown RBP12.61□□□□□ -0.39
UPK1B-202ENST00000460625 APOBEC3FQ8IUX4 373 aaKnown RBP12.61□□□□□ -0.39
UPK1B-202ENST00000460625 CABP5Q9NP86 173 aa12.61□□□□□ -0.39
UPK1B-202ENST00000460625 LMBRD1Q9NUN5 540 aa12.61□□□□□ -0.39
UPK1B-202ENST00000460625 FZD1Q9UP38 647 aa12.61□□□□□ -0.39
UPK1B-202ENST00000460625 ATAD5Q96QE3 1844 aa12.61□□□□□ -0.39
UPK1B-202ENST00000460625 CAP2P40123 477 aa12.6□□□□□ -0.39
UPK1B-202ENST00000460625 ECE1P42892 770 aa12.6□□□□□ -0.39
UPK1B-202ENST00000460625 AKAP17AQ02040 695 aaKnown RBP12.6□□□□□ -0.39
UPK1B-202ENST00000460625 KIF23Q02241 960 aaPredicted RBP12.6□□□□□ -0.39
UPK1B-202ENST00000460625 CCDC84Q86UT8 332 aaPredicted RBP12.6□□□□□ -0.39
UPK1B-202ENST00000460625 ACER1Q8TDN7 264 aa12.6□□□□□ -0.39
UPK1B-202ENST00000460625 WASF1Q92558 559 aa12.6□□□□□ -0.39
UPK1B-202ENST00000460625 ANP32EQ9BTT0 268 aa12.6□□□□□ -0.39
UPK1B-202ENST00000460625 UBA5Q9GZZ9 404 aa12.6□□□□□ -0.39
UPK1B-202ENST00000460625 ZSCAN16Q9H4T2 348 aaPredicted RBP12.6□□□□□ -0.39
UPK1B-202ENST00000460625 VPS54Q9P1Q0 977 aa12.6□□□□□ -0.39
UPK1B-202ENST00000460625 ATP6V1DQ9Y5K8 247 aa12.6□□□□□ -0.39
UPK1B-202ENST00000460625 NCLP19338 710 aaKnown RBP12.6□□□□□ -0.39
UPK1B-202ENST00000460625 GNAQP50148 359 aa12.6□□□□□ -0.39
UPK1B-202ENST00000460625 TTBK2Q6IQ55 1244 aa12.6□□□□□ -0.39
UPK1B-202ENST00000460625 DPY19L2Q6NUT2 758 aa12.6□□□□□ -0.39
UPK1B-202ENST00000460625 L3MBTL3Q96JM7 780 aaPredicted RBP12.6□□□□□ -0.39
UPK1B-202ENST00000460625 GPCPD1Q9NPB8 672 aa12.6□□□□□ -0.39
UPK1B-202ENST00000460625 TFIP11Q9UBB9 837 aaKnown RBP12.6□□□□□ -0.39
UPK1B-202ENST00000460625 GLTPD2A6NH11 291 aa12.59□□□□□ -0.39
UPK1B-202ENST00000460625 FIBPO43427 364 aa12.59□□□□□ -0.39
UPK1B-202ENST00000460625 RAD21O60216 631 aa12.59□□□□□ -0.39
UPK1B-202ENST00000460625 ZNF543Q08ER8 600 aa12.59□□□□□ -0.39
UPK1B-202ENST00000460625 PFKFB3Q16875 520 aaPredicted RBP12.59□□□□□ -0.39
UPK1B-202ENST00000460625 PPP4R3BQ5MIZ7 849 aa12.59□□□□□ -0.39
UPK1B-202ENST00000460625 KCTD1Q719H9 257 aa12.59□□□□□ -0.39
UPK1B-202ENST00000460625 USP48Q86UV5 1035 aa12.59□□□□□ -0.39
UPK1B-202ENST00000460625 GLIS2Q9BZE0 524 aaPredicted RBP12.59□□□□□ -0.39
UPK1B-202ENST00000460625 FTOQ9C0B1 505 aaKnown RBP eCLIP12.59□□□□□ -0.39
UPK1B-202ENST00000460625 SSC5DA1L4H1 1573 aa12.59□□□□□ -0.39
UPK1B-202ENST00000460625 F5H6K3 240 aa12.58□□□□□ -0.39
UPK1B-202ENST00000460625 GOLGA6L22H0YM25 854 aa12.58□□□□□ -0.39
UPK1B-202ENST00000460625 MMP1P03956 469 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms