RNA–Protein interactions for RNA: ENST00000460480.1

SLC6A1-203, Transcript of solute carrier family 6 member 1, humanhuman

TSL 4

Gene SLC6A1, Length 457 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-203ENST00000460480 NPLOC4Q8TAT6 608 aa17.77■□□□□ 0.44
SLC6A1-203ENST00000460480 DYNLL2Q96FJ2 89 aa17.77■□□□□ 0.44
SLC6A1-203ENST00000460480 HAUS7Q99871 368 aa17.77■□□□□ 0.44
SLC6A1-203ENST00000460480 BOLA2Q9H3K6 86 aa17.77■□□□□ 0.44
SLC6A1-203ENST00000460480 ARMT1Q9H993 441 aa17.77■□□□□ 0.44
SLC6A1-203ENST00000460480 ATP8A2Q9NTI2 1148 aa17.77■□□□□ 0.44
SLC6A1-203ENST00000460480 PAG1Q9NWQ8 432 aa17.77■□□□□ 0.44
SLC6A1-203ENST00000460480 HOXC10Q9NYD6 342 aa17.77■□□□□ 0.44
SLC6A1-203ENST00000460480 GLRX3O76003 335 aaKnown RBP17.76■□□□□ 0.43
SLC6A1-203ENST00000460480 ZMYND8Q9ULU4 1186 aaPredicted RBP17.76■□□□□ 0.43
SLC6A1-203ENST00000460480 C12orf60Q5U649 245 aa17.75■□□□□ 0.43
SLC6A1-203ENST00000460480 TMEM179Q6ZVK1 233 aa17.75■□□□□ 0.43
SLC6A1-203ENST00000460480 MOV10L1Q9BXT6 1211 aaKnown RBP17.75■□□□□ 0.43
SLC6A1-203ENST00000460480 SWAP70Q9UH65 585 aa17.75■□□□□ 0.43
SLC6A1-203ENST00000460480 TMX2Q9Y320 296 aa17.75■□□□□ 0.43
SLC6A1-203ENST00000460480 STRNO43815 780 aa17.74■□□□□ 0.43
SLC6A1-203ENST00000460480 MBD4O95243 580 aa17.74■□□□□ 0.43
SLC6A1-203ENST00000460480 AKR1B1P15121 316 aa17.74■□□□□ 0.43
SLC6A1-203ENST00000460480 UBE3CQ15386 1083 aa17.74■□□□□ 0.43
SLC6A1-203ENST00000460480 LRRC26Q2I0M4 334 aa17.74■□□□□ 0.43
SLC6A1-203ENST00000460480 C20orf194Q5TEA3 1177 aa17.74■□□□□ 0.43
SLC6A1-203ENST00000460480 MFSD14CQ5VZR4 134 aa17.74■□□□□ 0.43
SLC6A1-203ENST00000460480 TRPV1Q8NER1 839 aa17.74■□□□□ 0.43
SLC6A1-203ENST00000460480 LRCH3Q96II8 777 aa17.74■□□□□ 0.43
SLC6A1-203ENST00000460480 RCAN3Q9UKA8 241 aa17.74■□□□□ 0.43
SLC6A1-203ENST00000460480 USP17L12C9JPN9 530 aa17.73■□□□□ 0.43
SLC6A1-203ENST00000460480 USP17L21D6R901 530 aa17.73■□□□□ 0.43
SLC6A1-203ENST00000460480 MPHOSPH10O00566 681 aaKnown RBP17.73■□□□□ 0.43
SLC6A1-203ENST00000460480 DSG3P32926 999 aa17.73■□□□□ 0.43
SLC6A1-203ENST00000460480 MAGEA10P43363 369 aaPredicted RBP17.73■□□□□ 0.43
SLC6A1-203ENST00000460480 SHCBP1Q8NEM2 672 aa17.73■□□□□ 0.43
SLC6A1-203ENST00000460480 CCDC17Q96LX7 622 aa17.73■□□□□ 0.43
SLC6A1-203ENST00000460480 SPATC1LQ9H0A9 340 aa17.73■□□□□ 0.43
SLC6A1-203ENST00000460480 ADAMTS5Q9UNA0 930 aa17.73■□□□□ 0.43
SLC6A1-203ENST00000460480 NAV1Q8NEY1 1877 aa17.72■□□□□ 0.43
SLC6A1-203ENST00000460480 CYP2D7A0A087X1C5 515 aa17.72■□□□□ 0.43
SLC6A1-203ENST00000460480 COBLO75128 1261 aa17.72■□□□□ 0.43
SLC6A1-203ENST00000460480 SYN1P17600 705 aa17.72■□□□□ 0.43
SLC6A1-203ENST00000460480 CYP2C19P33261 490 aa17.72■□□□□ 0.43
SLC6A1-203ENST00000460480 CDK8P49336 464 aa17.72■□□□□ 0.43
SLC6A1-203ENST00000460480 ATP2B2Q01814 1243 aa17.72■□□□□ 0.43
SLC6A1-203ENST00000460480 C16orf86Q6ZW13 317 aa17.72■□□□□ 0.43
SLC6A1-203ENST00000460480 CLEC10AQ8IUN9 316 aa17.72■□□□□ 0.43
SLC6A1-203ENST00000460480 LPAR1Q92633 364 aa17.72■□□□□ 0.43
SLC6A1-203ENST00000460480 PUS7LQ9H0K6 701 aaKnown RBP17.72■□□□□ 0.43
SLC6A1-203ENST00000460480 CHMP4BQ9H444 224 aaKnown RBP17.72■□□□□ 0.43
SLC6A1-203ENST00000460480 IVNS1ABPQ9Y6Y0 642 aa17.72■□□□□ 0.43
SLC6A1-203ENST00000460480 LRIT3Q3SXY7 679 aa17.71■□□□□ 0.43
SLC6A1-203ENST00000460480 WDR78Q5VTH9 848 aa17.71■□□□□ 0.43
SLC6A1-203ENST00000460480 OLFML2BQ68BL8 750 aa17.71■□□□□ 0.43
SLC6A1-203ENST00000460480 CTR9Q6PD62 1173 aa17.71■□□□□ 0.43
SLC6A1-203ENST00000460480 MB21D1Q8N884 522 aa17.71■□□□□ 0.43
SLC6A1-203ENST00000460480 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.71■□□□□ 0.43
SLC6A1-203ENST00000460480 VCPKMTQ9H867 229 aa17.71■□□□□ 0.43
SLC6A1-203ENST00000460480 DDX20Q9UHI6 824 aaKnown RBP17.71■□□□□ 0.43
SLC6A1-203ENST00000460480 SMARCA5O60264 1052 aaPredicted RBP17.7■□□□□ 0.42
SLC6A1-203ENST00000460480 CYBAP13498 195 aa17.7■□□□□ 0.42
SLC6A1-203ENST00000460480 ERCC3P19447 782 aa17.7■□□□□ 0.42
SLC6A1-203ENST00000460480 ADORA2AP29274 412 aa17.7■□□□□ 0.42
SLC6A1-203ENST00000460480 GPR153Q6NV75 609 aa17.7■□□□□ 0.42
SLC6A1-203ENST00000460480 ABRAQ8N0Z2 381 aa17.7■□□□□ 0.42
SLC6A1-203ENST00000460480 LRRCC1Q9C099 1032 aa17.7■□□□□ 0.42
SLC6A1-203ENST00000460480 TANGO6Q9C0B7 1094 aa17.7■□□□□ 0.42
SLC6A1-203ENST00000460480 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.7■□□□□ 0.42
SLC6A1-203ENST00000460480 CWC22Q9HCG8 908 aaKnown RBP17.7■□□□□ 0.42
SLC6A1-203ENST00000460480 BAZ2AQ9UIF9 1905 aaKnown RBP17.69■□□□□ 0.42
SLC6A1-203ENST00000460480 MSCO60682 206 aa17.69■□□□□ 0.42
SLC6A1-203ENST00000460480 SPICE1Q8N0Z3 855 aa17.69■□□□□ 0.42
SLC6A1-203ENST00000460480 ATG4CQ96DT6 458 aa17.69■□□□□ 0.42
SLC6A1-203ENST00000460480 STRBPQ96SI9 672 aaKnown RBP17.69■□□□□ 0.42
SLC6A1-203ENST00000460480 BCL11AQ9H165 835 aa17.69■□□□□ 0.42
SLC6A1-203ENST00000460480 MROH8Q9H579 483 aa17.69■□□□□ 0.42
SLC6A1-203ENST00000460480 ARHGEF10LQ9HCE6 1279 aa17.69■□□□□ 0.42
SLC6A1-203ENST00000460480 A0A0G2JMZ2 1700 aa17.68■□□□□ 0.42
SLC6A1-203ENST00000460480 EEF2P13639 858 aaKnown RBP17.68■□□□□ 0.42
SLC6A1-203ENST00000460480 ICA1Q05084 483 aa17.68■□□□□ 0.42
SLC6A1-203ENST00000460480 TMEM132BQ14DG7 1078 aa17.68■□□□□ 0.42
SLC6A1-203ENST00000460480 SBK1Q52WX2 424 aa17.68■□□□□ 0.42
SLC6A1-203ENST00000460480 DPP9Q86TI2 863 aa17.68■□□□□ 0.42
SLC6A1-203ENST00000460480 DCTPP1Q9H773 170 aa17.68■□□□□ 0.42
SLC6A1-203ENST00000460480 SLC4A4Q9Y6R1 1079 aa17.68■□□□□ 0.42
SLC6A1-203ENST00000460480 ZNF236Q9UL36 1845 aa17.68■□□□□ 0.42
SLC6A1-203ENST00000460480 WDR46O15213 610 aaKnown RBP17.67■□□□□ 0.42
SLC6A1-203ENST00000460480 TDHQ8IZJ6 230 aa17.67■□□□□ 0.42
SLC6A1-203ENST00000460480 SENP6Q9GZR1 1112 aaPredicted RBP17.67■□□□□ 0.42
SLC6A1-203ENST00000460480 SH2D4AQ9H788 454 aa17.67■□□□□ 0.42
SLC6A1-203ENST00000460480 KANSL2Q9H9L4 492 aa17.67■□□□□ 0.42
SLC6A1-203ENST00000460480 FBXO28Q9NVF7 368 aa17.67■□□□□ 0.42
SLC6A1-203ENST00000460480 FRMPD3Q5JV73 1810 aa17.66■□□□□ 0.42
SLC6A1-203ENST00000460480 GSG1L2A8MUP6 293 aa17.66■□□□□ 0.42
SLC6A1-203ENST00000460480 DNM1LO00429 736 aa17.66■□□□□ 0.42
SLC6A1-203ENST00000460480 FLOT1O75955 427 aa17.66■□□□□ 0.42
SLC6A1-203ENST00000460480 CNGA1P29973 690 aa17.66■□□□□ 0.42
SLC6A1-203ENST00000460480 ZSCAN25Q6NSZ9 544 aa17.66■□□□□ 0.42
SLC6A1-203ENST00000460480 REPS2Q8NFH8 660 aa17.66■□□□□ 0.42
SLC6A1-203ENST00000460480 OSBP2Q969R2 916 aa17.66■□□□□ 0.42
SLC6A1-203ENST00000460480 ECHDC1Q9NTX5 307 aa17.66■□□□□ 0.42
SLC6A1-203ENST00000460480 SEPT4O43236 478 aa17.65■□□□□ 0.42
SLC6A1-203ENST00000460480 PRAMEF19Q5SWL8 479 aa17.65■□□□□ 0.42
SLC6A1-203ENST00000460480 GIMAP6Q6P9H5 292 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms