RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 RRAGBQ5VZM2 374 aa17.45■□□□□ 0.38
LMNB1-203ENST00000460265 PPFIBP1Q86W92 1011 aa17.45■□□□□ 0.38
LMNB1-203ENST00000460265 RIOK1Q9BRS2 568 aaKnown RBP17.45■□□□□ 0.38
LMNB1-203ENST00000460265 RNF26Q9BY78 433 aaPredicted RBP17.45■□□□□ 0.38
LMNB1-203ENST00000460265 FAM53CQ9NYF3 392 aa17.45■□□□□ 0.38
LMNB1-203ENST00000460265 TUBGCP6Q96RT7 1819 aa17.45■□□□□ 0.38
LMNB1-203ENST00000460265 PARP4Q9UKK3 1724 aaKnown RBP17.45■□□□□ 0.38
LMNB1-203ENST00000460265 UBA7P41226 1012 aa17.45■□□□□ 0.38
LMNB1-203ENST00000460265 ADKP55263 362 aaKnown RBP17.45■□□□□ 0.38
LMNB1-203ENST00000460265 GTF2IP78347 998 aa17.45■□□□□ 0.38
LMNB1-203ENST00000460265 WDR66Q8TBY9 1149 aa17.45■□□□□ 0.38
LMNB1-203ENST00000460265 SYMPKQ92797 1274 aaKnown RBP17.45■□□□□ 0.38
LMNB1-203ENST00000460265 RBM28Q9NW13 759 aaKnown RBP17.45■□□□□ 0.38
LMNB1-203ENST00000460265 DNAI1Q9UI46 699 aa17.45■□□□□ 0.38
LMNB1-203ENST00000460265 PLEKHG2Q9H7P9 1386 aa17.45■□□□□ 0.38
LMNB1-203ENST00000460265 URI1O94763 535 aaPredicted RBP17.45■□□□□ 0.38
LMNB1-203ENST00000460265 TRIM37O94972 964 aa17.45■□□□□ 0.38
LMNB1-203ENST00000460265 METTL16Q86W50 562 aaKnown RBP17.45■□□□□ 0.38
LMNB1-203ENST00000460265 ZNF622Q969S3 477 aaKnown RBP eCLIP17.45■□□□□ 0.385e-7■□□□□ 8.2
LMNB1-203ENST00000460265 TOB1P50616 345 aaPredicted RBP17.44■□□□□ 0.38
LMNB1-203ENST00000460265 IKQ13123 557 aaPredicted RBP17.44■□□□□ 0.38
LMNB1-203ENST00000460265 FILIP1LQ4L180 1135 aa17.44■□□□□ 0.38
LMNB1-203ENST00000460265 RESP18Q5W5W9 173 aa17.44■□□□□ 0.38
LMNB1-203ENST00000460265 ZCCHC17Q9NP64 241 aaKnown RBP17.44■□□□□ 0.38
LMNB1-203ENST00000460265 NOP2P46087 812 aaKnown RBP17.44■□□□□ 0.38
LMNB1-203ENST00000460265 PTPAQ15257 358 aa17.44■□□□□ 0.38
LMNB1-203ENST00000460265 FBXL16Q8N461 479 aa17.44■□□□□ 0.38
LMNB1-203ENST00000460265 MNS1Q8NEH6 495 aa17.44■□□□□ 0.38
LMNB1-203ENST00000460265 UBXN4Q92575 508 aa17.44■□□□□ 0.38
LMNB1-203ENST00000460265 DPF2Q92785 391 aa17.44■□□□□ 0.38
LMNB1-203ENST00000460265 DRC1Q96MC2 740 aa17.44■□□□□ 0.38
LMNB1-203ENST00000460265 LCMT1Q9UIC8 334 aa17.44■□□□□ 0.38
LMNB1-203ENST00000460265 FHOD1Q9Y613 1164 aa17.44■□□□□ 0.38
LMNB1-203ENST00000460265 TPM1P09493 284 aa17.44■□□□□ 0.38
LMNB1-203ENST00000460265 BRD2P25440 801 aaKnown RBP17.44■□□□□ 0.38
LMNB1-203ENST00000460265 CCT6AP40227 531 aaKnown RBP17.44■□□□□ 0.38
LMNB1-203ENST00000460265 NAPAP54920 295 aa17.44■□□□□ 0.38
LMNB1-203ENST00000460265 ANKRD20A12PQ8NF67 263 aa17.44■□□□□ 0.38
LMNB1-203ENST00000460265 MYCBPQ99417 103 aaPredicted RBP17.44■□□□□ 0.38
LMNB1-203ENST00000460265 GGA1Q9UJY5 639 aa17.44■□□□□ 0.38
LMNB1-203ENST00000460265 SCG2P13521 617 aa17.43■□□□□ 0.38
LMNB1-203ENST00000460265 BARGINQ6ZT62 677 aa17.43■□□□□ 0.38
LMNB1-203ENST00000460265 SRBD1Q8N5C6 995 aaKnown RBP17.43■□□□□ 0.38
LMNB1-203ENST00000460265 UBA5Q9GZZ9 404 aa17.43■□□□□ 0.38
LMNB1-203ENST00000460265 ATP8A2Q9NTI2 1148 aa17.43■□□□□ 0.38
LMNB1-203ENST00000460265 SEC63Q9UGP8 760 aaKnown RBP17.43■□□□□ 0.38
LMNB1-203ENST00000460265 TMEM232C9JQI7 657 aa17.43■□□□□ 0.38
LMNB1-203ENST00000460265 VEGFAP15692 232 aaPredicted RBP17.43■□□□□ 0.38
LMNB1-203ENST00000460265 PLA2G4AP47712 749 aa17.43■□□□□ 0.38
LMNB1-203ENST00000460265 LETM2Q2VYF4 491 aa17.43■□□□□ 0.38
LMNB1-203ENST00000460265 DHX37Q8IY37 1157 aaKnown RBP17.43■□□□□ 0.38
LMNB1-203ENST00000460265 SAMSN1Q9NSI8 373 aaKnown RBP17.43■□□□□ 0.38
LMNB1-203ENST00000460265 CLGNO14967 610 aa17.42■□□□□ 0.38
LMNB1-203ENST00000460265 PTPREP23469 700 aa17.42■□□□□ 0.38
LMNB1-203ENST00000460265 BTDP43251 543 aa17.42■□□□□ 0.38
LMNB1-203ENST00000460265 LMAN1P49257 510 aa17.42■□□□□ 0.38
LMNB1-203ENST00000460265 EARS2Q5JPH6 523 aaKnown RBP17.42■□□□□ 0.38
LMNB1-203ENST00000460265 KANK3Q6NY19 840 aa17.42■□□□□ 0.38
LMNB1-203ENST00000460265 STAG2Q8N3U4 1231 aa17.42■□□□□ 0.38
LMNB1-203ENST00000460265 CCDC150Q8NCX0 1101 aa17.42■□□□□ 0.38
LMNB1-203ENST00000460265 ARPP21Q9UBL0 812 aaPredicted RBP17.42■□□□□ 0.38
LMNB1-203ENST00000460265 N4BP2Q86UW6 1770 aaPredicted RBP17.42■□□□□ 0.38
LMNB1-203ENST00000460265 MYCNP04198 464 aaPredicted RBP17.42■□□□□ 0.38
LMNB1-203ENST00000460265 SERPINB2P05120 415 aa17.42■□□□□ 0.38
LMNB1-203ENST00000460265 SSBP05455 408 aaKnown RBP eCLIP17.42■□□□□ 0.38
LMNB1-203ENST00000460265 GSTO1P78417 241 aa17.42■□□□□ 0.38
LMNB1-203ENST00000460265 DOK7Q18PE1 504 aa17.42■□□□□ 0.38
LMNB1-203ENST00000460265 FBXO33Q7Z6M2 555 aa17.42■□□□□ 0.38
LMNB1-203ENST00000460265 BRIP1Q9BX63 1249 aa17.42■□□□□ 0.38
LMNB1-203ENST00000460265 ZC3H12CQ9C0D7 883 aaKnown RBP17.42■□□□□ 0.38
LMNB1-203ENST00000460265 MAN1B1Q9UKM7 699 aa17.42■□□□□ 0.38
LMNB1-203ENST00000460265 STAT6P42226 847 aa17.42■□□□□ 0.38
LMNB1-203ENST00000460265 SCNN1DP51172 638 aa17.42■□□□□ 0.38
LMNB1-203ENST00000460265 INF2Q27J81 1249 aa17.42■□□□□ 0.38
LMNB1-203ENST00000460265 FOXP4Q8IVH2 680 aaPredicted RBP17.42■□□□□ 0.38
LMNB1-203ENST00000460265 AMIGO3Q86WK7 504 aa17.41■□□□□ 0.38
LMNB1-203ENST00000460265 SEPT12Q8IYM1 358 aa17.41■□□□□ 0.38
LMNB1-203ENST00000460265 MAP3K14Q99558 947 aa17.41■□□□□ 0.38
LMNB1-203ENST00000460265 ZSWIM4Q9H7M6 989 aa17.41■□□□□ 0.38
LMNB1-203ENST00000460265 ZNF287Q9HBT7 754 aa17.41■□□□□ 0.38
LMNB1-203ENST00000460265 N4BP3O15049 544 aa17.41■□□□□ 0.38
LMNB1-203ENST00000460265 MUM1L1Q5H9M0 696 aa17.41■□□□□ 0.38
LMNB1-203ENST00000460265 JAKMIP3Q5VZ66 844 aa17.41■□□□□ 0.38
LMNB1-203ENST00000460265 DEF6Q9H4E7 631 aa17.41■□□□□ 0.38
LMNB1-203ENST00000460265 CCDC96Q2M329 555 aa17.4■□□□□ 0.38
LMNB1-203ENST00000460265 MSL1Q68DK7 614 aa17.4■□□□□ 0.38
LMNB1-203ENST00000460265 USP17L2Q6R6M4 530 aa17.4■□□□□ 0.38
LMNB1-203ENST00000460265 SARM1Q6SZW1 724 aa17.4■□□□□ 0.38
LMNB1-203ENST00000460265 PKD1L3Q7Z443 1732 aa17.4■□□□□ 0.38
LMNB1-203ENST00000460265 IQUBQ8NA54 791 aa17.4■□□□□ 0.38
LMNB1-203ENST00000460265 VPS16Q9H269 839 aa17.4■□□□□ 0.38
LMNB1-203ENST00000460265 GPCPD1Q9NPB8 672 aa17.4■□□□□ 0.38
LMNB1-203ENST00000460265 PRPF3O43395 683 aaKnown RBP17.4■□□□□ 0.38
LMNB1-203ENST00000460265 ERCC3P19447 782 aa17.4■□□□□ 0.38
LMNB1-203ENST00000460265 KARSQ15046 597 aaKnown RBP17.4■□□□□ 0.38
LMNB1-203ENST00000460265 TMTC3Q6ZXV5 915 aa17.4■□□□□ 0.38
LMNB1-203ENST00000460265 EYA3Q99504 573 aa17.4■□□□□ 0.38
LMNB1-203ENST00000460265 RRP15Q9Y3B9 282 aaKnown RBP17.4■□□□□ 0.38
LMNB1-203ENST00000460265 SRPRBQ9Y5M8 271 aaKnown RBP17.4■□□□□ 0.38
LMNB1-203ENST00000460265 TROAPQ12815 778 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms