RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 NID2Q14112 1375 aa11.95□□□□□ -0.5
HERC4-207ENST00000460168 NFKBIEO00221 500 aa11.95□□□□□ -0.5
HERC4-207ENST00000460168 GABPB1Q06547 395 aaPredicted RBP11.95□□□□□ -0.5
HERC4-207ENST00000460168 TCP10Q12799 353 aa11.95□□□□□ -0.5
HERC4-207ENST00000460168 PPP2R5BQ15173 497 aa11.95□□□□□ -0.5
HERC4-207ENST00000460168 SKOR2Q2VWA4 1001 aaPredicted RBP11.95□□□□□ -0.5
HERC4-207ENST00000460168 ZSCAN30Q86W11 494 aa11.95□□□□□ -0.5
HERC4-207ENST00000460168 C8orf76Q96K31 380 aa11.95□□□□□ -0.5
HERC4-207ENST00000460168 FAM217BQ9NTX9 383 aaPredicted RBP11.95□□□□□ -0.5
HERC4-207ENST00000460168 SERPINB13Q9UIV8 391 aa11.95□□□□□ -0.5
HERC4-207ENST00000460168 TCHHQ07283 1943 aa11.94□□□□□ -0.5
HERC4-207ENST00000460168 CALM1P0DP23 149 aa11.94□□□□□ -0.5
HERC4-207ENST00000460168 CALM2P0DP24 149 aa11.94□□□□□ -0.5
HERC4-207ENST00000460168 CALM3P0DP25 149 aa11.94□□□□□ -0.5
HERC4-207ENST00000460168 GUCY1B3Q02153 619 aa11.94□□□□□ -0.5
HERC4-207ENST00000460168 DNM1Q05193 864 aaKnown RBP11.94□□□□□ -0.5
HERC4-207ENST00000460168 NTRK3Q16288 839 aa11.94□□□□□ -0.5
HERC4-207ENST00000460168 CCDC178Q5BJE1 867 aa11.94□□□□□ -0.5
HERC4-207ENST00000460168 CCDC82Q8N4S0 544 aa11.94□□□□□ -0.5
HERC4-207ENST00000460168 MNS1Q8NEH6 495 aa11.94□□□□□ -0.5
HERC4-207ENST00000460168 TDRD3Q9H7E2 651 aaKnown RBP11.94□□□□□ -0.5
HERC4-207ENST00000460168 KAT14Q9H8E8 782 aa11.94□□□□□ -0.5
HERC4-207ENST00000460168 GDPD2Q9HCC8 539 aa11.94□□□□□ -0.5
HERC4-207ENST00000460168 MED4Q9NPJ6 270 aa11.94□□□□□ -0.5
HERC4-207ENST00000460168 IL17RBQ9NRM6 502 aa11.94□□□□□ -0.5
HERC4-207ENST00000460168 LMBRD1Q9NUN5 540 aa11.94□□□□□ -0.5
HERC4-207ENST00000460168 STX8Q9UNK0 236 aa11.94□□□□□ -0.5
HERC4-207ENST00000460168 DDX49Q9Y6V7 483 aaKnown RBP11.94□□□□□ -0.5
HERC4-207ENST00000460168 DDAH1O94760 285 aa11.94□□□□□ -0.5
HERC4-207ENST00000460168 IFNAR1P17181 557 aa11.94□□□□□ -0.5
HERC4-207ENST00000460168 CXCL9Q07325 125 aa11.94□□□□□ -0.5
HERC4-207ENST00000460168 SSRP1Q08945 709 aaKnown RBP11.94□□□□□ -0.5
HERC4-207ENST00000460168 TROAPQ12815 778 aa11.94□□□□□ -0.5
HERC4-207ENST00000460168 DGKHQ86XP1 1220 aa11.94□□□□□ -0.5
HERC4-207ENST00000460168 ZSCAN29Q8IWY8 852 aaPredicted RBP11.94□□□□□ -0.5
HERC4-207ENST00000460168 TRIM22Q8IYM9 498 aa11.94□□□□□ -0.5
HERC4-207ENST00000460168 PRMT6Q96LA8 375 aaPredicted RBP11.94□□□□□ -0.5
HERC4-207ENST00000460168 SLC26A6Q9BXS9 759 aa11.94□□□□□ -0.5
HERC4-207ENST00000460168 ZSCAN16Q9H4T2 348 aaPredicted RBP11.94□□□□□ -0.5
HERC4-207ENST00000460168 CNPY2Q9Y2B0 182 aa11.94□□□□□ -0.5
HERC4-207ENST00000460168 R3HCC1Q9Y3T6 440 aaKnown RBP11.94□□□□□ -0.5
HERC4-207ENST00000460168 CCDC189A1A4V9 331 aa11.93□□□□□ -0.5
HERC4-207ENST00000460168 KLHL33A6NCF5 533 aa11.93□□□□□ -0.5
HERC4-207ENST00000460168 FIBPO43427 364 aa11.93□□□□□ -0.5
HERC4-207ENST00000460168 CALRP27797 417 aaKnown RBP11.93□□□□□ -0.5
HERC4-207ENST00000460168 CIAPIN1Q6FI81 312 aa11.93□□□□□ -0.5
HERC4-207ENST00000460168 RCSD1Q6JBY9 416 aa11.93□□□□□ -0.5
HERC4-207ENST00000460168 CMTR1Q8N1G2 835 aaKnown RBP11.93□□□□□ -0.5
HERC4-207ENST00000460168 AGBL3Q8NEM8 1001 aa11.93□□□□□ -0.5
HERC4-207ENST00000460168 CTCFLQ8NI51 663 aaPredicted RBP11.93□□□□□ -0.5
HERC4-207ENST00000460168 GMLQ99445 158 aa11.93□□□□□ -0.5
HERC4-207ENST00000460168 ALG1Q9BT22 464 aa11.93□□□□□ -0.5
HERC4-207ENST00000460168 IDI2Q9BXS1 227 aa11.93□□□□□ -0.5
HERC4-207ENST00000460168 DHX36Q9H2U1 1008 aaKnown RBP11.93□□□□□ -0.5
HERC4-207ENST00000460168 TMOD2Q9NZR1 351 aa11.93□□□□□ -0.5
HERC4-207ENST00000460168 FEZ2Q9UHY8 353 aaPredicted RBP11.93□□□□□ -0.5
HERC4-207ENST00000460168 MYH8P13535 1937 aa11.93□□□□□ -0.5
HERC4-207ENST00000460168 KRT85P78386 507 aa11.92□□□□□ -0.5
HERC4-207ENST00000460168 RASSF7Q02833 373 aa11.92□□□□□ -0.5
HERC4-207ENST00000460168 GABPAQ06546 454 aa11.92□□□□□ -0.5
HERC4-207ENST00000460168 DLGAP5Q15398 846 aa11.92□□□□□ -0.5
HERC4-207ENST00000460168 FAM173BQ6P4H8 233 aa11.92□□□□□ -0.5
HERC4-207ENST00000460168 SDR16C5Q8N3Y7 309 aa11.92□□□□□ -0.5
HERC4-207ENST00000460168 CRACR2BQ8N4Y2 399 aaPredicted RBP11.92□□□□□ -0.5
HERC4-207ENST00000460168 FBXO18Q8NFZ0 1043 aa11.92□□□□□ -0.5
HERC4-207ENST00000460168 TCP11L1Q9NUJ3 509 aa11.92□□□□□ -0.5
HERC4-207ENST00000460168 FAM198AQ9UFP1 575 aa11.92□□□□□ -0.5
HERC4-207ENST00000460168 SWAP70Q9UH65 585 aa11.92□□□□□ -0.5
HERC4-207ENST00000460168 STK36Q9NRP7 1315 aa11.92□□□□□ -0.5
HERC4-207ENST00000460168 SPDYE2BA6NHP3 402 aa11.92□□□□□ -0.5
HERC4-207ENST00000460168 MPHOSPH10O00566 681 aaKnown RBP11.92□□□□□ -0.5
HERC4-207ENST00000460168 FMNL1O95466 1100 aaPredicted RBP11.92□□□□□ -0.5
HERC4-207ENST00000460168 SPDYE6P0CI01 402 aa11.92□□□□□ -0.5
HERC4-207ENST00000460168 ZFPM1Q8IX07 1006 aa11.92□□□□□ -0.5
HERC4-207ENST00000460168 PNMA1Q8ND90 353 aa11.92□□□□□ -0.5
HERC4-207ENST00000460168 GZF1Q9H116 711 aaPredicted RBP11.92□□□□□ -0.5
HERC4-207ENST00000460168 LTBP3Q9NS15 1303 aa11.92□□□□□ -0.5
HERC4-207ENST00000460168 KIF3CO14782 793 aa11.91□□□□□ -0.5
HERC4-207ENST00000460168 COQ9O75208 318 aa11.91□□□□□ -0.5
HERC4-207ENST00000460168 GUCY2CP25092 1073 aa11.91□□□□□ -0.5
HERC4-207ENST00000460168 AKAP17AQ02040 695 aaKnown RBP11.91□□□□□ -0.5
HERC4-207ENST00000460168 RESTQ13127 1097 aa11.91□□□□□ -0.5
HERC4-207ENST00000460168 TRIM29Q14134 588 aa11.91□□□□□ -0.5
HERC4-207ENST00000460168 TNIP1Q15025 636 aa11.91□□□□□ -0.5
HERC4-207ENST00000460168 CSPP1Q1MSJ5 1256 aa11.91□□□□□ -0.5
HERC4-207ENST00000460168 OTUD7BQ6GQQ9 843 aa11.91□□□□□ -0.5
HERC4-207ENST00000460168 NEDD1Q8NHV4 660 aa11.91□□□□□ -0.5
HERC4-207ENST00000460168 WASF1Q92558 559 aa11.91□□□□□ -0.5
HERC4-207ENST00000460168 AIFM3Q96NN9 605 aa11.91□□□□□ -0.5
HERC4-207ENST00000460168 PAIP2Q9BPZ3 127 aaKnown RBP11.91□□□□□ -0.5
HERC4-207ENST00000460168 GJB4Q9NTQ9 266 aa11.91□□□□□ -0.5
HERC4-207ENST00000460168 PI4KBQ9UBF8 816 aa11.91□□□□□ -0.5
HERC4-207ENST00000460168 ARFGEF1Q9Y6D6 1849 aa11.91□□□□□ -0.5
HERC4-207ENST00000460168 KIF5BP33176 963 aa11.91□□□□□ -0.5
HERC4-207ENST00000460168 KLHL40Q2TBA0 621 aa11.91□□□□□ -0.5
HERC4-207ENST00000460168 ICE2Q659A1 982 aa11.91□□□□□ -0.5
HERC4-207ENST00000460168 USP48Q86UV5 1035 aa11.91□□□□□ -0.5
HERC4-207ENST00000460168 MSL3Q8N5Y2 521 aaKnown RBP11.91□□□□□ -0.5
HERC4-207ENST00000460168 CEP95Q96GE4 821 aa11.91□□□□□ -0.5
HERC4-207ENST00000460168 EHD4Q9H223 541 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms