RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 FAM109BQ6ICB4 259 aaPredicted RBP12.65□□□□□ -0.38
HDLBP-227ENST00000458564 MB21D1Q8N884 522 aa12.65□□□□□ -0.38
HDLBP-227ENST00000458564 TRPV1Q8NER1 839 aa12.65□□□□□ -0.38
HDLBP-227ENST00000458564 MOV10L1Q9BXT6 1211 aaKnown RBP12.65□□□□□ -0.38
HDLBP-227ENST00000458564 SENP6Q9GZR1 1112 aaPredicted RBP12.65□□□□□ -0.38
HDLBP-227ENST00000458564 SPATC1LQ9H0A9 340 aa12.65□□□□□ -0.38
HDLBP-227ENST00000458564 HOXC10Q9NYD6 342 aa12.65□□□□□ -0.38
HDLBP-227ENST00000458564 TCRBV5S4A2TA0A5A2 114 aa12.64□□□□□ -0.39
HDLBP-227ENST00000458564 POTEB2H3BUK9 544 aa12.64□□□□□ -0.39
HDLBP-227ENST00000458564 ADORA2AP29274 412 aa12.64□□□□□ -0.39
HDLBP-227ENST00000458564 TMEM179Q6ZVK1 233 aa12.64□□□□□ -0.39
HDLBP-227ENST00000458564 ABRAQ8N0Z2 381 aa12.64□□□□□ -0.39
HDLBP-227ENST00000458564 RHPN1Q8TCX5 695 aa12.64□□□□□ -0.39
HDLBP-227ENST00000458564 DCP1AQ9NPI6 582 aaPredicted RBP12.64□□□□□ -0.39
HDLBP-227ENST00000458564 MCM9Q9NXL9 1143 aa12.64□□□□□ -0.39
HDLBP-227ENST00000458564 SWAP70Q9UH65 585 aa12.64□□□□□ -0.39
HDLBP-227ENST00000458564 RLFQ13129 1914 aa12.64□□□□□ -0.39
HDLBP-227ENST00000458564 SEPT4O43236 478 aa12.63□□□□□ -0.39
HDLBP-227ENST00000458564 CNGA1P29973 690 aa12.63□□□□□ -0.39
HDLBP-227ENST00000458564 EVX2Q03828 476 aa12.63□□□□□ -0.39
HDLBP-227ENST00000458564 SNX17Q15036 470 aa12.63□□□□□ -0.39
HDLBP-227ENST00000458564 DPP9Q86TI2 863 aa12.63□□□□□ -0.39
HDLBP-227ENST00000458564 ARRDC4Q8NCT1 418 aa12.63□□□□□ -0.39
HDLBP-227ENST00000458564 LBHD1Q9BQE6 289 aaPredicted RBP12.63□□□□□ -0.39
HDLBP-227ENST00000458564 TANGO6Q9C0B7 1094 aa12.63□□□□□ -0.39
HDLBP-227ENST00000458564 ZNF532Q9HCE3 1301 aa12.62□□□□□ -0.39
HDLBP-227ENST00000458564 LTBP2Q14767 1821 aa12.62□□□□□ -0.39
HDLBP-227ENST00000458564 ERCC3P19447 782 aa12.62□□□□□ -0.39
HDLBP-227ENST00000458564 ATN1P54259 1190 aaPredicted RBP12.62□□□□□ -0.39
HDLBP-227ENST00000458564 RTP1P59025 263 aa12.62□□□□□ -0.39
HDLBP-227ENST00000458564 CLASRPQ8N2M8 674 aaKnown RBP12.62□□□□□ -0.39
HDLBP-227ENST00000458564 LCORLQ8N3X6 602 aa12.62□□□□□ -0.39
HDLBP-227ENST00000458564 SDR42E1Q8WUS8 393 aa12.62□□□□□ -0.39
HDLBP-227ENST00000458564 KIF1BPQ96EK5 621 aa12.62□□□□□ -0.39
HDLBP-227ENST00000458564 MROH8Q9H579 483 aa12.62□□□□□ -0.39
HDLBP-227ENST00000458564 SH2D4AQ9H788 454 aa12.62□□□□□ -0.39
HDLBP-227ENST00000458564 IL1RAPL2Q9NP60 686 aa12.62□□□□□ -0.39
HDLBP-227ENST00000458564 SLC5A4Q9NY91 659 aa12.62□□□□□ -0.39
HDLBP-227ENST00000458564 TMX2Q9Y320 296 aa12.62□□□□□ -0.39
HDLBP-227ENST00000458564 ROBO3Q96MS0 1386 aa12.61□□□□□ -0.39
HDLBP-227ENST00000458564 KBTBD13C9JR72 458 aa12.61□□□□□ -0.39
HDLBP-227ENST00000458564 GOLIM4O00461 696 aa12.61□□□□□ -0.39
HDLBP-227ENST00000458564 MPHOSPH10O00566 681 aaKnown RBP12.61□□□□□ -0.39
HDLBP-227ENST00000458564 COBLO75128 1261 aa12.61□□□□□ -0.39
HDLBP-227ENST00000458564 DSG3P32926 999 aa12.61□□□□□ -0.39
HDLBP-227ENST00000458564 ICA1Q05084 483 aa12.61□□□□□ -0.39
HDLBP-227ENST00000458564 KIAA1755Q5JYT7 1200 aa12.61□□□□□ -0.39
HDLBP-227ENST00000458564 C1orf53Q5VUE5 145 aa12.61□□□□□ -0.39
HDLBP-227ENST00000458564 SIAH1Q8IUQ4 282 aa12.61□□□□□ -0.39
HDLBP-227ENST00000458564 SLC44A5Q8NCS7 719 aa12.61□□□□□ -0.39
HDLBP-227ENST00000458564 CCDC17Q96LX7 622 aa12.61□□□□□ -0.39
HDLBP-227ENST00000458564 VCPKMTQ9H867 229 aa12.61□□□□□ -0.39
HDLBP-227ENST00000458564 ATP8A2Q9NTI2 1148 aa12.61□□□□□ -0.39
HDLBP-227ENST00000458564 PRKAG2Q9UGJ0 569 aa12.61□□□□□ -0.39
HDLBP-227ENST00000458564 NRBP1Q9UHY1 535 aa12.61□□□□□ -0.39
HDLBP-227ENST00000458564 PRUNE2Q8WUY3 3088 aa12.6□□□□□ -0.39
HDLBP-227ENST00000458564 WDR46O15213 610 aaKnown RBP12.6□□□□□ -0.39
HDLBP-227ENST00000458564 FLOT1O75955 427 aa12.6□□□□□ -0.39
HDLBP-227ENST00000458564 CYP2D6P10635 497 aa12.6□□□□□ -0.39
HDLBP-227ENST00000458564 HNRNPUQ00839 825 aaKnown RBP eCLIP12.6□□□□□ -0.391e-6■□□□□ 8.9
HDLBP-227ENST00000458564 GJC2Q5T442 439 aaPredicted RBP12.6□□□□□ -0.39
HDLBP-227ENST00000458564 SLC39A5Q6ZMH5 540 aa12.6□□□□□ -0.39
HDLBP-227ENST00000458564 PANK1Q8TE04 598 aa12.6□□□□□ -0.39
HDLBP-227ENST00000458564 MAML3Q96JK9 1138 aa12.6□□□□□ -0.39
HDLBP-227ENST00000458564 GUCD1Q96NT3 240 aa12.6□□□□□ -0.39
HDLBP-227ENST00000458564 DNAJC2Q99543 621 aaKnown RBP12.6□□□□□ -0.39
HDLBP-227ENST00000458564 ARHGEF10LQ9HCE6 1279 aa12.6□□□□□ -0.39
HDLBP-227ENST00000458564 ADAMTS5Q9UNA0 930 aa12.6□□□□□ -0.39
HDLBP-227ENST00000458564 SPTBN5Q9NRC6 3674 aaKnown RBP12.59□□□□□ -0.39
HDLBP-227ENST00000458564 SLC25A27O95847 323 aa12.59□□□□□ -0.39
HDLBP-227ENST00000458564 IFIT2P09913 472 aaKnown RBP12.59□□□□□ -0.39
HDLBP-227ENST00000458564 AKR1B1P15121 316 aa12.59□□□□□ -0.39
HDLBP-227ENST00000458564 ADD2P35612 726 aa12.59□□□□□ -0.39
HDLBP-227ENST00000458564 RPAP2Q8IXW5 612 aaPredicted RBP12.59□□□□□ -0.39
HDLBP-227ENST00000458564 ATG4CQ96DT6 458 aa12.59□□□□□ -0.39
HDLBP-227ENST00000458564 DYNLL2Q96FJ2 89 aa12.59□□□□□ -0.39
HDLBP-227ENST00000458564 ARMT1Q9H993 441 aa12.59□□□□□ -0.39
HDLBP-227ENST00000458564 ATP11BQ9Y2G3 1177 aa12.59□□□□□ -0.39
HDLBP-227ENST00000458564 PARP14Q460N5 1801 aa12.59□□□□□ -0.39
HDLBP-227ENST00000458564 ZBED9Q6R2W3 1325 aa12.59□□□□□ -0.39
HDLBP-227ENST00000458564 RAB11FIP3O75154 756 aa12.58□□□□□ -0.4
HDLBP-227ENST00000458564 HMMRO75330 724 aa12.58□□□□□ -0.4
HDLBP-227ENST00000458564 MBD4O95243 580 aa12.58□□□□□ -0.4
HDLBP-227ENST00000458564 MS4A1P11836 297 aa12.58□□□□□ -0.4
HDLBP-227ENST00000458564 FCER1AP12319 257 aa12.58□□□□□ -0.4
HDLBP-227ENST00000458564 TMEM132BQ14DG7 1078 aa12.58□□□□□ -0.4
HDLBP-227ENST00000458564 LRRC41Q15345 812 aa12.58□□□□□ -0.4
HDLBP-227ENST00000458564 TRIM60Q495X7 471 aa12.58□□□□□ -0.4
HDLBP-227ENST00000458564 FAM47AQ5JRC9 791 aa12.58□□□□□ -0.4
HDLBP-227ENST00000458564 C12orf60Q5U649 245 aa12.58□□□□□ -0.4
HDLBP-227ENST00000458564 C16orf86Q6ZW13 317 aa12.58□□□□□ -0.4
HDLBP-227ENST00000458564 NCAPG2Q86XI2 1143 aa12.58□□□□□ -0.4
HDLBP-227ENST00000458564 CLEC10AQ8IUN9 316 aa12.58□□□□□ -0.4
HDLBP-227ENST00000458564 SPICE1Q8N0Z3 855 aa12.58□□□□□ -0.4
HDLBP-227ENST00000458564 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.58□□□□□ -0.44e-7■□□□□ 9.9
HDLBP-227ENST00000458564 PDLIM7Q9NR12 457 aa12.58□□□□□ -0.4
HDLBP-227ENST00000458564 PAG1Q9NWQ8 432 aa12.58□□□□□ -0.4
HDLBP-227ENST00000458564 DIS3Q9Y2L1 958 aaKnown RBP12.58□□□□□ -0.4
HDLBP-227ENST00000458564 PRKAB2O43741 272 aa12.57□□□□□ -0.4
HDLBP-227ENST00000458564 ATP5JP18859 108 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms