RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 HELLSQ9NRZ9 838 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 GRIN2AQ12879 1464 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 ADGRL3Q9HAR2 1447 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 RGS16O15492 202 aaPredicted RBP5.74□□□□□ -1.49
CSMD3-204ENST00000455883 MMEP08473 750 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 IDEP14735 1019 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 BZW1Q7L1Q6 419 aaKnown RBP5.74□□□□□ -1.49
CSMD3-204ENST00000455883 MTA3Q9BTC8 594 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 KAT14Q9H8E8 782 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 RIC8AQ9NPQ8 531 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 FAM169AQ9Y6X4 670 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 DEXIO95424 95 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 LAMC2Q13753 1193 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 OGFOD1Q8N543 542 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 GRAMD1AQ96CP6 724 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 PRPF40BQ6NWY9 871 aaKnown RBP5.74□□□□□ -1.49
CSMD3-204ENST00000455883 HACE1Q8IYU2 909 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 ST13P4Q8IZP2 240 aaPredicted RBP5.74□□□□□ -1.49
CSMD3-204ENST00000455883 STAG1Q8WVM7 1258 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 CCDC97Q96F63 343 aaPredicted RBP5.74□□□□□ -1.49
CSMD3-204ENST00000455883 DNAJC17Q9NVM6 304 aaKnown RBP5.74□□□□□ -1.49
CSMD3-204ENST00000455883 BLOC1S6Q9UL45 172 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 TNKSO95271 1327 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 POLR2BP30876 1174 aaKnown RBP5.74□□□□□ -1.49
CSMD3-204ENST00000455883 EXOSC9Q06265 439 aaKnown RBP5.74□□□□□ -1.49
CSMD3-204ENST00000455883 BRDTQ58F21 947 aaPredicted RBP5.74□□□□□ -1.49
CSMD3-204ENST00000455883 WDR44Q5JSH3 913 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 ZNF530Q6P9A1 599 aaPredicted RBP5.74□□□□□ -1.49
CSMD3-204ENST00000455883 TEX9Q8N6V9 391 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 CDKL2Q92772 493 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 UIMC1Q96RL1 719 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 YY1AP1Q9H869 796 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 KRT4P19013 534 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 GJB2P29033 226 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 RFC1P35251 1148 aaPredicted RBP5.74□□□□□ -1.49
CSMD3-204ENST00000455883 STRN3Q13033 797 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 MAP3K5Q99683 1374 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 KDM5CP41229 1560 aa5.74□□□□□ -1.49
CSMD3-204ENST00000455883 AP3B1O00203 1094 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 SMIM24O75264 130 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 TTC4O95801 387 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 KRT8P05787 483 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 KRT10P13645 584 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 PCYT1AP49585 367 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 ANKRD44Q8N8A2 993 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 TRIM55Q9BYV6 548 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 ARHGEF11O15085 1522 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 IKBKBO14920 756 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 RGS12O14924 1447 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 MATR3P43243 847 aaKnown RBP eCLIP5.73□□□□□ -1.49
CSMD3-204ENST00000455883 PPP1R42Q7Z4L9 355 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 SEPT3Q9UH03 358 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 CHUKO15111 745 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 PSMA3P25788 255 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 KRT2P35908 639 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 DTHD1Q6ZMT9 781 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 PHKBQ93100 1093 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 TRIM33Q9UPN9 1127 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 WDR62O43379 1518 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 ESRRBO95718 433 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 PYGLP06737 847 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 TRIM27P14373 513 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 PSMC4P43686 418 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 MXD3Q9BW11 206 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 MAPKBP1O60336 1514 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 PALM3A6NDB9 673 aaPredicted RBP5.73□□□□□ -1.49
CSMD3-204ENST00000455883 IFNA8P32881 189 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 MAGEA9P43362 315 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 CCDC186Q7Z3E2 898 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 ZKSCAN3Q9BRR0 538 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 VIPAS39Q9H9C1 493 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 ERBB4Q15303 1308 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 CCDC188H7C350 402 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 IFIT3O14879 490 aaKnown RBP5.73□□□□□ -1.49
CSMD3-204ENST00000455883 FLIIQ13045 1269 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 AMOTL2Q9Y2J4 779 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 TSPOAP1O95153 1857 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 APOA4P06727 396 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 GSTA2P09210 222 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 UPF3AQ9H1J1 476 aaKnown RBP5.73□□□□□ -1.49
CSMD3-204ENST00000455883 ZHX3Q9H4I2 956 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 DCTPP1Q9H773 170 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 PREX2Q70Z35 1606 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 FLT4P35916 1363 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 PFDN1O60925 122 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 TMEM67Q5HYA8 995 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 NBPF3Q9H094 633 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 EPS8L2Q9H6S3 715 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 CREB3O43889 395 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 MYO1EQ12965 1108 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 IQGAP3Q86VI3 1631 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 ADAMTS12P58397 1594 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 PRPF4BQ13523 1007 aaKnown RBP5.73□□□□□ -1.49
CSMD3-204ENST00000455883 KRBA2Q6ZNG9 492 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 CCDC197Q8NCU1 140 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 MTBPQ96DY7 904 aa5.73□□□□□ -1.49
CSMD3-204ENST00000455883 SRGAP2BP0DMP2 458 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 ETF1P62495 437 aaKnown RBP5.72□□□□□ -1.49
CSMD3-204ENST00000455883 UBXN1Q04323 297 aa5.72□□□□□ -1.49
CSMD3-204ENST00000455883 BIRC2Q13490 618 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms