RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 SMC1BQ8NDV3 1235 aa5.2□□□□□ -1.58
RBM39-220ENST00000455343 TMC1Q8TDI8 760 aa5.2□□□□□ -1.58
RBM39-220ENST00000455343 BSNDQ8WZ55 320 aa5.2□□□□□ -1.58
RBM39-220ENST00000455343 NXPE3Q969Y0 559 aa5.2□□□□□ -1.58
RBM39-220ENST00000455343 COG3Q96JB2 828 aa5.2□□□□□ -1.58
RBM39-220ENST00000455343 RUSC1Q9BVN2 902 aa5.2□□□□□ -1.58
RBM39-220ENST00000455343 RNF208Q9H0X6 261 aa5.2□□□□□ -1.58
RBM39-220ENST00000455343 C1orf115Q9H7X2 142 aa5.2□□□□□ -1.58
RBM39-220ENST00000455343 FOXD3Q9UJU5 478 aaPredicted RBP5.2□□□□□ -1.58
RBM39-220ENST00000455343 GTF3C3Q9Y5Q9 886 aa5.2□□□□□ -1.58
RBM39-220ENST00000455343 KDM2BQ8NHM5 1336 aa5.2□□□□□ -1.58
RBM39-220ENST00000455343 HMX2A2RU54 273 aa5.19□□□□□ -1.58
RBM39-220ENST00000455343 SART1O43290 800 aaKnown RBP5.19□□□□□ -1.58
RBM39-220ENST00000455343 FZD6O60353 706 aa5.19□□□□□ -1.58
RBM39-220ENST00000455343 MED26O95402 600 aa5.19□□□□□ -1.58
RBM39-220ENST00000455343 GYS1P13807 737 aa5.19□□□□□ -1.58
RBM39-220ENST00000455343 USP5P45974 858 aa5.19□□□□□ -1.58
RBM39-220ENST00000455343 ARL4DP49703 201 aa5.19□□□□□ -1.58
RBM39-220ENST00000455343 TMF1P82094 1093 aa5.19□□□□□ -1.58
RBM39-220ENST00000455343 C19orf57Q0VDD7 668 aa5.19□□□□□ -1.58
RBM39-220ENST00000455343 RRS1Q15050 365 aaKnown RBP5.19□□□□□ -1.58
RBM39-220ENST00000455343 HSP90AB2PQ58FF8 381 aa5.19□□□□□ -1.58
RBM39-220ENST00000455343 VN1R5Q7Z5H4 357 aa5.19□□□□□ -1.58
RBM39-220ENST00000455343 GJD3Q8N144 294 aa5.19□□□□□ -1.58
RBM39-220ENST00000455343 DBNDD2Q9BQY9 259 aa5.19□□□□□ -1.58
RBM39-220ENST00000455343 BHLHE41Q9C0J9 482 aaPredicted RBP5.19□□□□□ -1.58
RBM39-220ENST00000455343 ASAP1Q9ULH1 1129 aa5.19□□□□□ -1.58
RBM39-220ENST00000455343 MTMR7Q9Y216 660 aa5.19□□□□□ -1.58
RBM39-220ENST00000455343 HIF3AQ9Y2N7 669 aa5.19□□□□□ -1.58
RBM39-220ENST00000455343 C4BP0C0L5 1744 aa5.19□□□□□ -1.58
RBM39-220ENST00000455343 MON2Q7Z3U7 1717 aa5.19□□□□□ -1.58
RBM39-220ENST00000455343 TOGARAM1Q9Y4F4 1720 aa5.19□□□□□ -1.58
RBM39-220ENST00000455343 KCPQ6ZWJ8 1503 aa5.18□□□□□ -1.58
RBM39-220ENST00000455343 INSRP06213 1382 aa5.18□□□□□ -1.58
RBM39-220ENST00000455343 KIF24Q5T7B8 1368 aa5.18□□□□□ -1.58
RBM39-220ENST00000455343 DOT1LQ8TEK3 1739 aa5.18□□□□□ -1.58
RBM39-220ENST00000455343 WDR90Q96KV7 1748 aa5.18□□□□□ -1.58
RBM39-220ENST00000455343 NCAPD2Q15021 1401 aa5.18□□□□□ -1.58
RBM39-220ENST00000455343 CARNS1A5YM72 827 aa5.18□□□□□ -1.58
RBM39-220ENST00000455343 MEGF11A6BM72 1044 aa5.18□□□□□ -1.58
RBM39-220ENST00000455343 GLTPD2A6NH11 291 aa5.18□□□□□ -1.58
RBM39-220ENST00000455343 SOX1O00570 391 aaPredicted RBP5.18□□□□□ -1.58
RBM39-220ENST00000455343 FYB1O15117 783 aa5.18□□□□□ -1.58
RBM39-220ENST00000455343 COBLO75128 1261 aa5.18□□□□□ -1.58
RBM39-220ENST00000455343 BMP3P12645 472 aa5.18□□□□□ -1.58
RBM39-220ENST00000455343 VEGFAP15692 232 aaPredicted RBP5.18□□□□□ -1.58
RBM39-220ENST00000455343 ZNF211Q13398 564 aaPredicted RBP5.18□□□□□ -1.58
RBM39-220ENST00000455343 AAMPQ13685 434 aa5.18□□□□□ -1.58
RBM39-220ENST00000455343 IKBKEQ14164 716 aa5.18□□□□□ -1.58
RBM39-220ENST00000455343 FDX2Q6P4F2 183 aa5.18□□□□□ -1.58
RBM39-220ENST00000455343 CLEC10AQ8IUN9 316 aa5.18□□□□□ -1.58
RBM39-220ENST00000455343 TESK2Q96S53 571 aa5.18□□□□□ -1.58
RBM39-220ENST00000455343 FAM83CQ9BQN1 747 aa5.18□□□□□ -1.58
RBM39-220ENST00000455343 LATS2Q9NRM7 1088 aa5.18□□□□□ -1.58
RBM39-220ENST00000455343 ATG3Q9NT62 314 aa5.18□□□□□ -1.58
RBM39-220ENST00000455343 CCDC87Q9NVE4 849 aa5.18□□□□□ -1.58
RBM39-220ENST00000455343 PIM2Q9P1W9 311 aa5.18□□□□□ -1.58
RBM39-220ENST00000455343 KDRP35968 1356 aa5.17□□□□□ -1.58
RBM39-220ENST00000455343 TONSLQ96HA7 1378 aa5.17□□□□□ -1.58
RBM39-220ENST00000455343 KDM6AO15550 1401 aaPredicted RBP5.17□□□□□ -1.58
RBM39-220ENST00000455343 PRR19A6NJB7 356 aa5.17□□□□□ -1.58
RBM39-220ENST00000455343 RPS6KA4O75676 772 aa5.17□□□□□ -1.58
RBM39-220ENST00000455343 SPINK2P20155 84 aa5.17□□□□□ -1.58
RBM39-220ENST00000455343 FKBP4Q02790 459 aaKnown RBP eCLIP5.17□□□□□ -1.58
RBM39-220ENST00000455343 DALRD3Q5D0E6 543 aaKnown RBP5.17□□□□□ -1.58
RBM39-220ENST00000455343 PEAR1Q5VY43 1037 aaPredicted RBP5.17□□□□□ -1.58
RBM39-220ENST00000455343 MCTP1Q6DN14 999 aa5.17□□□□□ -1.58
RBM39-220ENST00000455343 BEND4Q6ZU67 534 aa5.17□□□□□ -1.58
RBM39-220ENST00000455343 SIN3AQ96ST3 1273 aa5.17□□□□□ -1.58
RBM39-220ENST00000455343 SOX17Q9H6I2 414 aaPredicted RBP5.17□□□□□ -1.58
RBM39-220ENST00000455343 PRDM10Q9NQV6 1147 aa5.17□□□□□ -1.58
RBM39-220ENST00000455343 TMOD3Q9NYL9 352 aa5.17□□□□□ -1.58
RBM39-220ENST00000455343 RNF181Q9P0P0 153 aa5.17□□□□□ -1.58
RBM39-220ENST00000455343 C5P01031 1676 aa5.17□□□□□ -1.58
RBM39-220ENST00000455343 KIAA1551Q9HCM1 1747 aa5.17□□□□□ -1.58
RBM39-220ENST00000455343 FLT4P35916 1363 aa5.16□□□□□ -1.58
RBM39-220ENST00000455343 SMG6Q86US8 1419 aaKnown RBP5.16□□□□□ -1.58
RBM39-220ENST00000455343 LOC100289279A0A1B0GTE1 492 aa5.16□□□□□ -1.58
RBM39-220ENST00000455343 GAS2O43903 313 aaKnown RBP5.16□□□□□ -1.58
RBM39-220ENST00000455343 ABL1P00519 1130 aa5.16□□□□□ -1.58
RBM39-220ENST00000455343 ESRRAP11474 423 aaPredicted RBP5.16□□□□□ -1.58
RBM39-220ENST00000455343 PHKG2P15735 406 aa5.16□□□□□ -1.58
RBM39-220ENST00000455343 GRIK1P39086 918 aa5.16□□□□□ -1.58
RBM39-220ENST00000455343 DDR1Q08345 913 aa5.16□□□□□ -1.58
RBM39-220ENST00000455343 INTS5Q6P9B9 1019 aaKnown RBP5.16□□□□□ -1.58
RBM39-220ENST00000455343 SHKBP1Q8TBC3 707 aa5.16□□□□□ -1.58
RBM39-220ENST00000455343 ASAP3Q8TDY4 903 aa5.16□□□□□ -1.58
RBM39-220ENST00000455343 KRTAP4-12Q9BQ66 201 aa5.16□□□□□ -1.58
RBM39-220ENST00000455343 CARD11Q9BXL7 1154 aa5.16□□□□□ -1.58
RBM39-220ENST00000455343 USP26Q9BXU7 913 aa5.16□□□□□ -1.58
RBM39-220ENST00000455343 TMPRSS13Q9BYE2 586 aa5.16□□□□□ -1.58
RBM39-220ENST00000455343 KCNF1Q9H3M0 494 aa5.16□□□□□ -1.58
RBM39-220ENST00000455343 ZFYVE28Q9HCC9 887 aa5.16□□□□□ -1.58
RBM39-220ENST00000455343 ANO2Q9NQ90 1003 aa5.16□□□□□ -1.58
RBM39-220ENST00000455343 SPG7Q9UQ90 795 aa5.16□□□□□ -1.58
RBM39-220ENST00000455343 CNTNAP4Q9C0A0 1308 aa5.16□□□□□ -1.58
RBM39-220ENST00000455343 LTN1O94822 1766 aa5.16□□□□□ -1.58
RBM39-220ENST00000455343 UBR3Q6ZT12 1888 aa5.15□□□□□ -1.58
RBM39-220ENST00000455343 FOXN1O15353 648 aa5.15□□□□□ -1.59
RBM39-220ENST00000455343 TIAF1O95411 115 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms