RNA–Protein interactions for RNA: ENST00000455279.6

CCHCR1-209, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 676 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-209ENST00000455279 DDRGK1Q96HY6 314 aa24.36■■□□□ 1.49
CCHCR1-209ENST00000455279 TMX2Q9Y320 296 aa24.36■■□□□ 1.49
CCHCR1-209ENST00000455279 ROBO3Q96MS0 1386 aa24.36■■□□□ 1.49
CCHCR1-209ENST00000455279 APPP05067 770 aa24.35■■□□□ 1.49
CCHCR1-209ENST00000455279 TDO2P48775 406 aa24.35■■□□□ 1.49
CCHCR1-209ENST00000455279 UBXN2AP68543 259 aa24.35■■□□□ 1.49
CCHCR1-209ENST00000455279 ATP2B2Q01814 1243 aa24.35■■□□□ 1.49
CCHCR1-209ENST00000455279 CCL14Q16627 93 aa24.35■■□□□ 1.49
CCHCR1-209ENST00000455279 VPS53Q5VIR6 699 aa24.35■■□□□ 1.49
CCHCR1-209ENST00000455279 AMOTL1Q8IY63 956 aa24.35■■□□□ 1.49
CCHCR1-209ENST00000455279 CCDC17Q96LX7 622 aa24.35■■□□□ 1.49
CCHCR1-209ENST00000455279 RABGAP1Q9Y3P9 1069 aa24.35■■□□□ 1.49
CCHCR1-209ENST00000455279 A0A0G2JMZ2 1700 aa24.35■■□□□ 1.49
CCHCR1-209ENST00000455279 PATL2C9JE40 543 aaKnown RBP24.34■■□□□ 1.49
CCHCR1-209ENST00000455279 GJB1P08034 283 aa24.34■■□□□ 1.49
CCHCR1-209ENST00000455279 GIMAP6Q6P9H5 292 aa24.34■■□□□ 1.49
CCHCR1-209ENST00000455279 USP6NLQ92738 828 aa24.34■■□□□ 1.49
CCHCR1-209ENST00000455279 TANGO6Q9C0B7 1094 aa24.34■■□□□ 1.49
CCHCR1-209ENST00000455279 VCPKMTQ9H867 229 aa24.34■■□□□ 1.49
CCHCR1-209ENST00000455279 INCENPQ9NQS7 918 aa24.34■■□□□ 1.49
CCHCR1-209ENST00000455279 GJA8P48165 433 aa24.33■■□□□ 1.49
CCHCR1-209ENST00000455279 MORN1Q5T089 497 aa24.33■■□□□ 1.49
CCHCR1-209ENST00000455279 SAMD1Q6SPF0 538 aaPredicted RBP24.33■■□□□ 1.49
CCHCR1-209ENST00000455279 LBX2Q6XYB7 198 aa24.33■■□□□ 1.49
CCHCR1-209ENST00000455279 U2AF1L4Q8WU68 220 aaKnown RBP24.33■■□□□ 1.49
CCHCR1-209ENST00000455279 ATG4CQ96DT6 458 aa24.33■■□□□ 1.49
CCHCR1-209ENST00000455279 FAM227BQ96M60 508 aa24.33■■□□□ 1.49
CCHCR1-209ENST00000455279 FBXO28Q9NVF7 368 aa24.33■■□□□ 1.49
CCHCR1-209ENST00000455279 A0A0D9SFI3 127 aa24.32■■□□□ 1.48
CCHCR1-209ENST00000455279 PLEKHH3Q7Z736 793 aa24.32■■□□□ 1.48
CCHCR1-209ENST00000455279 ARHGEF10LQ9HCE6 1279 aa24.32■■□□□ 1.48
CCHCR1-209ENST00000455279 ZBTB47Q9UFB7 747 aaPredicted RBP24.32■■□□□ 1.48
CCHCR1-209ENST00000455279 MAPK4P31152 587 aa24.31■■□□□ 1.48
CCHCR1-209ENST00000455279 UBE2Q1Q7Z7E8 422 aa24.31■■□□□ 1.48
CCHCR1-209ENST00000455279 PLEKHM2Q8IWE5 1019 aa24.31■■□□□ 1.48
CCHCR1-209ENST00000455279 GTF3C2Q8WUA4 911 aaPredicted RBP24.31■■□□□ 1.48
CCHCR1-209ENST00000455279 EVI5LQ96CN4 794 aa24.31■■□□□ 1.48
CCHCR1-209ENST00000455279 DEFB118Q96PH6 123 aa24.31■■□□□ 1.48
CCHCR1-209ENST00000455279 NUP88Q99567 741 aaPredicted RBP24.31■■□□□ 1.48
CCHCR1-209ENST00000455279 NUDT12Q9BQG2 462 aa24.31■■□□□ 1.48
CCHCR1-209ENST00000455279 RWDD1Q9H446 243 aaPredicted RBP24.31■■□□□ 1.48
CCHCR1-209ENST00000455279 FLRT1Q9NZU1 646 aa24.31■■□□□ 1.48
CCHCR1-209ENST00000455279 COL11A1P12107 1806 aaPredicted RBP24.31■■□□□ 1.48
CCHCR1-209ENST00000455279 IGKV6D-41A0A0C4DH26 115 aa24.3■■□□□ 1.48
CCHCR1-209ENST00000455279 GNAT2P19087 354 aa24.3■■□□□ 1.48
CCHCR1-209ENST00000455279 DSG3P32926 999 aa24.3■■□□□ 1.48
CCHCR1-209ENST00000455279 COG2Q14746 738 aa24.3■■□□□ 1.48
CCHCR1-209ENST00000455279 WDR78Q5VTH9 848 aa24.3■■□□□ 1.48
CCHCR1-209ENST00000455279 PRPF38BQ5VTL8 546 aaKnown RBP24.3■■□□□ 1.48
CCHCR1-209ENST00000455279 CHD1LQ86WJ1 897 aa24.3■■□□□ 1.48
CCHCR1-209ENST00000455279 KANSL2Q9H9L4 492 aa24.3■■□□□ 1.48
CCHCR1-209ENST00000455279 PAK6Q9NQU5 681 aaPredicted RBP24.3■■□□□ 1.48
CCHCR1-209ENST00000455279 SGPL1O95470 568 aa24.29■■□□□ 1.48
CCHCR1-209ENST00000455279 HMGCRP04035 888 aa24.29■■□□□ 1.48
CCHCR1-209ENST00000455279 NUCB1Q02818 461 aa24.29■■□□□ 1.48
CCHCR1-209ENST00000455279 CTDSPL2Q05D32 466 aa24.29■■□□□ 1.48
CCHCR1-209ENST00000455279 PPARAQ07869 468 aa24.29■■□□□ 1.48
CCHCR1-209ENST00000455279 FAM47AQ5JRC9 791 aa24.29■■□□□ 1.48
CCHCR1-209ENST00000455279 ZNF589Q86UQ0 364 aaPredicted RBP24.29■■□□□ 1.48
CCHCR1-209ENST00000455279 MOV10L1Q9BXT6 1211 aaKnown RBP24.29■■□□□ 1.48
CCHCR1-209ENST00000455279 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.29■■□□□ 1.48
CCHCR1-209ENST00000455279 MKNK2Q9HBH9 465 aa24.29■■□□□ 1.48
CCHCR1-209ENST00000455279 MYH4Q9Y623 1939 aa24.28■■□□□ 1.48
CCHCR1-209ENST00000455279 RAD21O60216 631 aa24.28■■□□□ 1.48
CCHCR1-209ENST00000455279 FLOT1O75955 427 aa24.28■■□□□ 1.48
CCHCR1-209ENST00000455279 NMIQ13287 307 aaPredicted RBP24.28■■□□□ 1.48
CCHCR1-209ENST00000455279 FAM83BQ5T0W9 1011 aa24.28■■□□□ 1.48
CCHCR1-209ENST00000455279 NPLOC4Q8TAT6 608 aa24.28■■□□□ 1.48
CCHCR1-209ENST00000455279 NAPBQ9H115 298 aa24.28■■□□□ 1.48
CCHCR1-209ENST00000455279 AAMPQ13685 434 aa24.27■■□□□ 1.48
CCHCR1-209ENST00000455279 NKX2-3Q8TAU0 364 aa24.27■■□□□ 1.48
CCHCR1-209ENST00000455279 DIS3LQ8TF46 1054 aaKnown RBP24.27■■□□□ 1.48
CCHCR1-209ENST00000455279 LPAR1Q92633 364 aa24.27■■□□□ 1.48
CCHCR1-209ENST00000455279 WDR46O15213 610 aaKnown RBP24.26■■□□□ 1.47
CCHCR1-209ENST00000455279 PTPREP23469 700 aa24.26■■□□□ 1.47
CCHCR1-209ENST00000455279 LRRFIP1Q32MZ4 808 aaKnown RBP24.26■■□□□ 1.47
CCHCR1-209ENST00000455279 CCAR1Q8IX12 1150 aaKnown RBP24.26■■□□□ 1.47
CCHCR1-209ENST00000455279 SOCS4Q8WXH5 440 aa24.26■■□□□ 1.47
CCHCR1-209ENST00000455279 CEP95Q96GE4 821 aa24.26■■□□□ 1.47
CCHCR1-209ENST00000455279 SPATC1LQ9H0A9 340 aa24.26■■□□□ 1.47
CCHCR1-209ENST00000455279 TRIM6-TRIM34B2RNG4 842 aa24.25■■□□□ 1.47
CCHCR1-209ENST00000455279 PRKAR2AP13861 404 aaKnown RBP24.25■■□□□ 1.47
CCHCR1-209ENST00000455279 ERCC3P19447 782 aa24.25■■□□□ 1.47
CCHCR1-209ENST00000455279 PDE4AP27815 886 aa24.25■■□□□ 1.47
CCHCR1-209ENST00000455279 CCND3P30281 292 aaPredicted RBP24.25■■□□□ 1.47
CCHCR1-209ENST00000455279 CACNB2Q08289 660 aaPredicted RBP24.25■■□□□ 1.47
CCHCR1-209ENST00000455279 MAP2K5Q13163 448 aa24.25■■□□□ 1.47
CCHCR1-209ENST00000455279 TMEM132BQ14DG7 1078 aa24.25■■□□□ 1.47
CCHCR1-209ENST00000455279 MAP3K21Q5TCX8 1036 aa24.25■■□□□ 1.47
CCHCR1-209ENST00000455279 LRRC47Q8N1G4 583 aaKnown RBP24.25■■□□□ 1.47
CCHCR1-209ENST00000455279 RILPL2Q969X0 211 aa24.25■■□□□ 1.47
CCHCR1-209ENST00000455279 CHMP4CQ96CF2 233 aa24.25■■□□□ 1.47
CCHCR1-209ENST00000455279 CRISPLD2Q9H0B8 497 aa24.25■■□□□ 1.47
CCHCR1-209ENST00000455279 HOXC10Q9NYD6 342 aa24.25■■□□□ 1.47
CCHCR1-209ENST00000455279 CLIP2Q9UDT6 1046 aa24.25■■□□□ 1.47
CCHCR1-209ENST00000455279 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.25■■□□□ 1.47
CCHCR1-209ENST00000455279 NDUFB10O96000 172 aa24.24■■□□□ 1.47
CCHCR1-209ENST00000455279 RGS2P41220 211 aa24.24■■□□□ 1.47
CCHCR1-209ENST00000455279 MNX1P50219 401 aaPredicted RBP24.24■■□□□ 1.47
CCHCR1-209ENST00000455279 GRB14Q14449 540 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms