RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 TSPY8P0CW00 308 aa21.06■□□□□ 0.96
COPS7A-202ENST00000455113 SOX10P56693 466 aa21.06■□□□□ 0.96
COPS7A-202ENST00000455113 CWC27Q6UX04 472 aaKnown RBP21.06■□□□□ 0.96
COPS7A-202ENST00000455113 CLEC10AQ8IUN9 316 aa21.06■□□□□ 0.96
COPS7A-202ENST00000455113 VCPKMTQ9H867 229 aa21.06■□□□□ 0.96
COPS7A-202ENST00000455113 CWC22Q9HCG8 908 aaKnown RBP21.06■□□□□ 0.96
COPS7A-202ENST00000455113 MORF4L1Q9UBU8 362 aa21.06■□□□□ 0.96
COPS7A-202ENST00000455113 PRKCZQ05513 592 aa21.05■□□□□ 0.96
COPS7A-202ENST00000455113 VPS53Q5VIR6 699 aa21.05■□□□□ 0.96
COPS7A-202ENST00000455113 HOXC10Q9NYD6 342 aa21.05■□□□□ 0.96
COPS7A-202ENST00000455113 HSPD1P10809 573 aaKnown RBP21.04■□□□□ 0.96
COPS7A-202ENST00000455113 CCNA1P78396 465 aa21.04■□□□□ 0.96
COPS7A-202ENST00000455113 COG2Q14746 738 aa21.04■□□□□ 0.96
COPS7A-202ENST00000455113 ALX1Q15699 326 aa21.04■□□□□ 0.96
COPS7A-202ENST00000455113 ARMC5Q96C12 935 aa21.04■□□□□ 0.96
COPS7A-202ENST00000455113 TMEM106CQ9BVX2 250 aa21.04■□□□□ 0.96
COPS7A-202ENST00000455113 ERVK-9P63128 1117 aa21.04■□□□□ 0.96
COPS7A-202ENST00000455113 ERVK-24P63145 666 aa21.04■□□□□ 0.96
COPS7A-202ENST00000455113 SPICE1Q8N0Z3 855 aa21.04■□□□□ 0.96
COPS7A-202ENST00000455113 BIN2Q9UBW5 565 aaPredicted RBP21.04■□□□□ 0.96
COPS7A-202ENST00000455113 RABGAP1Q9Y3P9 1069 aa21.04■□□□□ 0.96
COPS7A-202ENST00000455113 WDR46O15213 610 aaKnown RBP21.03■□□□□ 0.96
COPS7A-202ENST00000455113 GRK4P32298 578 aa21.03■□□□□ 0.96
COPS7A-202ENST00000455113 PPP4R3BQ5MIZ7 849 aa21.03■□□□□ 0.96
COPS7A-202ENST00000455113 ZNF589Q86UQ0 364 aaPredicted RBP21.03■□□□□ 0.96
COPS7A-202ENST00000455113 SIAH1Q8IUQ4 282 aa21.03■□□□□ 0.96
COPS7A-202ENST00000455113 TOMM22Q9NS69 142 aa21.03■□□□□ 0.96
COPS7A-202ENST00000455113 NYAP2Q9P242 653 aa21.03■□□□□ 0.96
COPS7A-202ENST00000455113 RBPJLQ9UBG7 517 aa21.03■□□□□ 0.96
COPS7A-202ENST00000455113 TSPY2A6NKD2 308 aa21.02■□□□□ 0.96
COPS7A-202ENST00000455113 FGAP02671 866 aa21.02■□□□□ 0.96
COPS7A-202ENST00000455113 MAPK4P31152 587 aa21.02■□□□□ 0.96
COPS7A-202ENST00000455113 FLT3LGP49771 235 aa21.02■□□□□ 0.96
COPS7A-202ENST00000455113 CTDSPL2Q05D32 466 aa21.02■□□□□ 0.96
COPS7A-202ENST00000455113 SH3TC2Q8TF17 1288 aa21.02■□□□□ 0.96
COPS7A-202ENST00000455113 TXNRD2Q9NNW7 524 aa21.02■□□□□ 0.96
COPS7A-202ENST00000455113 FOXP2O15409 715 aa21.01■□□□□ 0.95
COPS7A-202ENST00000455113 FLOT1O75955 427 aa21.01■□□□□ 0.95
COPS7A-202ENST00000455113 UBXN2AP68543 259 aa21.01■□□□□ 0.95
COPS7A-202ENST00000455113 TFAP4Q01664 338 aa21.01■□□□□ 0.95
COPS7A-202ENST00000455113 LBX2Q6XYB7 198 aa21.01■□□□□ 0.95
COPS7A-202ENST00000455113 SLAIN1Q8ND83 568 aa21.01■□□□□ 0.95
COPS7A-202ENST00000455113 ZNF333Q96JL9 665 aa21.01■□□□□ 0.95
COPS7A-202ENST00000455113 CLIP2Q9UDT6 1046 aa21.01■□□□□ 0.95
COPS7A-202ENST00000455113 ANAPC4Q9UJX5 808 aa21.01■□□□□ 0.95
COPS7A-202ENST00000455113 GABRQQ9UN88 632 aa21.01■□□□□ 0.95
COPS7A-202ENST00000455113 ZMYM6O95789 1325 aa21.01■□□□□ 0.95
COPS7A-202ENST00000455113 CDC45O75419 566 aa21.01■□□□□ 0.95
COPS7A-202ENST00000455113 TTLL1O95922 423 aa21.01■□□□□ 0.95
COPS7A-202ENST00000455113 RGS19P49795 217 aa21.01■□□□□ 0.95
COPS7A-202ENST00000455113 MLLT1Q03111 559 aaPredicted RBP21.01■□□□□ 0.95
COPS7A-202ENST00000455113 C8orf34Q49A92 452 aa21.01■□□□□ 0.95
COPS7A-202ENST00000455113 NEDD1Q8NHV4 660 aa21.01■□□□□ 0.95
COPS7A-202ENST00000455113 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.01■□□□□ 0.95
COPS7A-202ENST00000455113 SPDYE16A6NNV3 312 aaPredicted RBP21■□□□□ 0.95
COPS7A-202ENST00000455113 RANBP6O60518 1105 aaKnown RBP21■□□□□ 0.95
COPS7A-202ENST00000455113 IRF5Q13568 498 aa21■□□□□ 0.95
COPS7A-202ENST00000455113 FAM47AQ5JRC9 791 aa21■□□□□ 0.95
COPS7A-202ENST00000455113 SAMD1Q6SPF0 538 aaPredicted RBP21■□□□□ 0.95
COPS7A-202ENST00000455113 RUFY2Q8WXA3 655 aa21■□□□□ 0.95
COPS7A-202ENST00000455113 CEP95Q96GE4 821 aa21■□□□□ 0.95
COPS7A-202ENST00000455113 GREB1LQ9C091 1923 aaPredicted RBP21■□□□□ 0.95
COPS7A-202ENST00000455113 ADCY3O60266 1144 aa20.99■□□□□ 0.95
COPS7A-202ENST00000455113 Q3C1V9 767 aa20.99■□□□□ 0.95
COPS7A-202ENST00000455113 WDR78Q5VTH9 848 aa20.99■□□□□ 0.95
COPS7A-202ENST00000455113 MB21D1Q8N884 522 aa20.99■□□□□ 0.95
COPS7A-202ENST00000455113 PXYLP1Q8TE99 480 aa20.99■□□□□ 0.95
COPS7A-202ENST00000455113 NUDT12Q9BQG2 462 aa20.99■□□□□ 0.95
COPS7A-202ENST00000455113 MTMR4Q9NYA4 1195 aa20.99■□□□□ 0.95
COPS7A-202ENST00000455113 SYNPO2Q9UMS6 1093 aa20.99■□□□□ 0.95
COPS7A-202ENST00000455113 MYH4Q9Y623 1939 aa20.99■□□□□ 0.95
COPS7A-202ENST00000455113 MYCP01106 439 aaPredicted RBP20.98■□□□□ 0.95
COPS7A-202ENST00000455113 DOCK3Q8IZD9 2030 aa20.98■□□□□ 0.95
COPS7A-202ENST00000455113 SOCS4Q8WXH5 440 aa20.98■□□□□ 0.95
COPS7A-202ENST00000455113 PLIN4Q96Q06 1357 aa20.98■□□□□ 0.95
COPS7A-202ENST00000455113 F5H6K3 240 aa20.98■□□□□ 0.95
COPS7A-202ENST00000455113 ZNF213O14771 459 aa20.98■□□□□ 0.95
COPS7A-202ENST00000455113 PEX10O60683 326 aa20.98■□□□□ 0.95
COPS7A-202ENST00000455113 PCP11498 1178 aaKnown RBP20.98■□□□□ 0.95
COPS7A-202ENST00000455113 DSG3P32926 999 aa20.98■□□□□ 0.95
COPS7A-202ENST00000455113 KLRC3Q07444 240 aa20.98■□□□□ 0.95
COPS7A-202ENST00000455113 RRP12Q5JTH9 1297 aaKnown RBP20.98■□□□□ 0.95
COPS7A-202ENST00000455113 KIAA1755Q5JYT7 1200 aa20.98■□□□□ 0.95
COPS7A-202ENST00000455113 RNF41Q9H4P4 317 aaPredicted RBP20.98■□□□□ 0.95
COPS7A-202ENST00000455113 IVNS1ABPQ9Y6Y0 642 aa20.98■□□□□ 0.95
COPS7A-202ENST00000455113 IGKV6D-41A0A0C4DH26 115 aa20.97■□□□□ 0.95
COPS7A-202ENST00000455113 CHMLP26374 656 aa20.97■□□□□ 0.95
COPS7A-202ENST00000455113 MFSD6Q6ZSS7 791 aa20.97■□□□□ 0.95
COPS7A-202ENST00000455113 MKL1Q969V6 931 aa20.97■□□□□ 0.95
COPS7A-202ENST00000455113 STX8Q9UNK0 236 aa20.97■□□□□ 0.95
COPS7A-202ENST00000455113 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.97■□□□□ 0.95
COPS7A-202ENST00000455113 ORC4O43929 436 aa20.96■□□□□ 0.95
COPS7A-202ENST00000455113 HAND2P61296 217 aa20.96■□□□□ 0.95
COPS7A-202ENST00000455113 PLS1Q14651 629 aa20.96■□□□□ 0.95
COPS7A-202ENST00000455113 FAM83BQ5T0W9 1011 aa20.96■□□□□ 0.95
COPS7A-202ENST00000455113 GPR142Q7Z601 462 aa20.96■□□□□ 0.95
COPS7A-202ENST00000455113 PLEKHH3Q7Z736 793 aa20.96■□□□□ 0.95
COPS7A-202ENST00000455113 DSCC1Q9BVC3 393 aa20.96■□□□□ 0.95
COPS7A-202ENST00000455113 PORCNQ9H237 461 aa20.96■□□□□ 0.95
COPS7A-202ENST00000455113 CTNNA3Q9UI47 895 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms