RNA–Protein interactions for RNA: ENST00000454635.6

LINC00963-207, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 910 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-207ENST00000454635 RPAP3Q9H6T3 665 aaPredicted RBP12.63□□□□□ -0.39
LINC00963-207ENST00000454635 HELLSQ9NRZ9 838 aa12.63□□□□□ -0.39
LINC00963-207ENST00000454635 SYNPO2Q9UMS6 1093 aa12.63□□□□□ -0.39
LINC00963-207ENST00000454635 TMX2Q9Y320 296 aa12.63□□□□□ -0.39
LINC00963-207ENST00000454635 IVNS1ABPQ9Y6Y0 642 aa12.63□□□□□ -0.39
LINC00963-207ENST00000454635 TRIM6-TRIM34B2RNG4 842 aa12.62□□□□□ -0.39
LINC00963-207ENST00000454635 HIP1O00291 1037 aa12.62□□□□□ -0.39
LINC00963-207ENST00000454635 HMGCRP04035 888 aa12.62□□□□□ -0.39
LINC00963-207ENST00000454635 NUCB1Q02818 461 aa12.62□□□□□ -0.39
LINC00963-207ENST00000454635 COG2Q14746 738 aa12.62□□□□□ -0.39
LINC00963-207ENST00000454635 SHROOM1Q2M3G4 852 aaPredicted RBP12.62□□□□□ -0.39
LINC00963-207ENST00000454635 SLFNL1Q499Z3 407 aa12.62□□□□□ -0.39
LINC00963-207ENST00000454635 CHD1LQ86WJ1 897 aa12.62□□□□□ -0.39
LINC00963-207ENST00000454635 SLC44A5Q8NCS7 719 aa12.62□□□□□ -0.39
LINC00963-207ENST00000454635 LNPKQ9C0E8 428 aa12.62□□□□□ -0.39
LINC00963-207ENST00000454635 VCPKMTQ9H867 229 aa12.62□□□□□ -0.39
LINC00963-207ENST00000454635 PLIN4Q96Q06 1357 aa12.61□□□□□ -0.39
LINC00963-207ENST00000454635 M0R2C6 588 aa12.61□□□□□ -0.39
LINC00963-207ENST00000454635 XRCC5P13010 732 aaKnown RBP12.61□□□□□ -0.39
LINC00963-207ENST00000454635 AKR1B1P15121 316 aa12.61□□□□□ -0.39
LINC00963-207ENST00000454635 GUCY1A2P33402 732 aa12.61□□□□□ -0.39
LINC00963-207ENST00000454635 RGS2P41220 211 aa12.61□□□□□ -0.39
LINC00963-207ENST00000454635 IFNL3Q8IZI9 196 aa12.61□□□□□ -0.39
LINC00963-207ENST00000454635 ACER1Q8TDN7 264 aa12.61□□□□□ -0.39
LINC00963-207ENST00000454635 RNF208Q9H0X6 261 aa12.61□□□□□ -0.39
LINC00963-207ENST00000454635 GABRQQ9UN88 632 aa12.61□□□□□ -0.39
LINC00963-207ENST00000454635 CYP2D7A0A087X1C5 515 aa12.6□□□□□ -0.39
LINC00963-207ENST00000454635 POTEFA5A3E0 1075 aa12.6□□□□□ -0.39
LINC00963-207ENST00000454635 FLOT1O75955 427 aa12.6□□□□□ -0.39
LINC00963-207ENST00000454635 CHGBP05060 677 aa12.6□□□□□ -0.39
LINC00963-207ENST00000454635 INHAP05111 366 aa12.6□□□□□ -0.39
LINC00963-207ENST00000454635 GJB1P08034 283 aa12.6□□□□□ -0.39
LINC00963-207ENST00000454635 CCL5P13501 91 aa12.6□□□□□ -0.39
LINC00963-207ENST00000454635 COPB2P35606 906 aa12.6□□□□□ -0.39
LINC00963-207ENST00000454635 GJA8P48165 433 aa12.6□□□□□ -0.39
LINC00963-207ENST00000454635 NT5C2P49902 561 aa12.6□□□□□ -0.39
LINC00963-207ENST00000454635 ATP2B2Q01814 1243 aa12.6□□□□□ -0.39
LINC00963-207ENST00000454635 B4GALNT3Q6L9W6 998 aa12.6□□□□□ -0.39
LINC00963-207ENST00000454635 PLEKHH3Q7Z736 793 aa12.6□□□□□ -0.39
LINC00963-207ENST00000454635 APBA2Q99767 749 aa12.6□□□□□ -0.39
LINC00963-207ENST00000454635 OSBPL3Q9H4L5 887 aa12.6□□□□□ -0.39
LINC00963-207ENST00000454635 SLC5A4Q9NY91 659 aa12.6□□□□□ -0.39
LINC00963-207ENST00000454635 RBPJLQ9UBG7 517 aa12.6□□□□□ -0.39
LINC00963-207ENST00000454635 ZMYM6O95789 1325 aa12.6□□□□□ -0.39
LINC00963-207ENST00000454635 A0A1W2PRG0 241 aa12.59□□□□□ -0.39
LINC00963-207ENST00000454635 SPDYE16A6NNV3 312 aaPredicted RBP12.59□□□□□ -0.39
LINC00963-207ENST00000454635 STRNO43815 780 aa12.59□□□□□ -0.39
LINC00963-207ENST00000454635 TSPY3P0CV98 308 aa12.59□□□□□ -0.39
LINC00963-207ENST00000454635 TSPY8P0CW00 308 aa12.59□□□□□ -0.39
LINC00963-207ENST00000454635 EEF2P13639 858 aaKnown RBP12.59□□□□□ -0.39
LINC00963-207ENST00000454635 RASA1P20936 1047 aa12.59□□□□□ -0.39
LINC00963-207ENST00000454635 PPARAQ07869 468 aa12.59□□□□□ -0.39
LINC00963-207ENST00000454635 MCMDC2Q4G0Z9 681 aa12.59□□□□□ -0.39
LINC00963-207ENST00000454635 WDR78Q5VTH9 848 aa12.59□□□□□ -0.39
LINC00963-207ENST00000454635 PRPF38BQ5VTL8 546 aaKnown RBP12.59□□□□□ -0.39
LINC00963-207ENST00000454635 GPR142Q7Z601 462 aa12.59□□□□□ -0.39
LINC00963-207ENST00000454635 SHCBP1Q8NEM2 672 aa12.59□□□□□ -0.39
LINC00963-207ENST00000454635 RILPL2Q969X0 211 aa12.59□□□□□ -0.39
LINC00963-207ENST00000454635 EPB41L4AQ9HCS5 686 aaPredicted RBP12.59□□□□□ -0.39
LINC00963-207ENST00000454635 TXNRD2Q9NNW7 524 aa12.59□□□□□ -0.39
LINC00963-207ENST00000454635 NYAP2Q9P242 653 aa12.59□□□□□ -0.39
LINC00963-207ENST00000454635 RAD21O60216 631 aa12.58□□□□□ -0.4
LINC00963-207ENST00000454635 TTLL1O95922 423 aa12.58□□□□□ -0.4
LINC00963-207ENST00000454635 MYCP01106 439 aaPredicted RBP12.58□□□□□ -0.4
LINC00963-207ENST00000454635 PCP11498 1178 aaKnown RBP12.58□□□□□ -0.4
LINC00963-207ENST00000454635 ELNP15502 786 aa12.58□□□□□ -0.4
LINC00963-207ENST00000454635 ZKSCAN1P17029 563 aaPredicted RBP12.58□□□□□ -0.4
LINC00963-207ENST00000454635 EN2P19622 333 aaPredicted RBP12.58□□□□□ -0.4
LINC00963-207ENST00000454635 MROH8Q9H579 483 aa12.58□□□□□ -0.4
LINC00963-207ENST00000454635 HMX1Q9NP08 348 aaPredicted RBP12.58□□□□□ -0.4
LINC00963-207ENST00000454635 RPTORQ8N122 1335 aa12.58□□□□□ -0.4
LINC00963-207ENST00000454635 ALPK3Q96L96 1907 aa12.57□□□□□ -0.4
LINC00963-207ENST00000454635 SLC15A5A6NIM6 579 aa12.57□□□□□ -0.4
LINC00963-207ENST00000454635 SLC25A27O95847 323 aa12.57□□□□□ -0.4
LINC00963-207ENST00000454635 EVX2Q03828 476 aa12.57□□□□□ -0.4
LINC00963-207ENST00000454635 MTFR1Q15390 333 aa12.57□□□□□ -0.4
LINC00963-207ENST00000454635 SPICE1Q8N0Z3 855 aa12.57□□□□□ -0.4
LINC00963-207ENST00000454635 SEC62Q99442 399 aaKnown RBP12.57□□□□□ -0.4
LINC00963-207ENST00000454635 HTATIP2Q9BUP3 242 aa12.57□□□□□ -0.4
LINC00963-207ENST00000454635 DIAPH3Q9NSV4 1193 aa12.57□□□□□ -0.4
LINC00963-207ENST00000454635 GJD2Q9UKL4 321 aa12.57□□□□□ -0.4
LINC00963-207ENST00000454635 CTDP1Q9Y5B0 961 aaPredicted RBP12.57□□□□□ -0.4
LINC00963-207ENST00000454635 CCDC171Q6TFL3 1326 aa12.57□□□□□ -0.4
LINC00963-207ENST00000454635 TSPY2A6NKD2 308 aa12.56□□□□□ -0.4
LINC00963-207ENST00000454635 SGPL1O95470 568 aa12.56□□□□□ -0.4
LINC00963-207ENST00000454635 CENPBP07199 599 aaPredicted RBP12.56□□□□□ -0.4
LINC00963-207ENST00000454635 FDX1P10109 184 aa12.56□□□□□ -0.4
LINC00963-207ENST00000454635 CYP2B6P20813 491 aa12.56□□□□□ -0.4
LINC00963-207ENST00000454635 DSG3P32926 999 aa12.56□□□□□ -0.4
LINC00963-207ENST00000454635 MAP2K5Q13163 448 aa12.56□□□□□ -0.4
LINC00963-207ENST00000454635 ALX1Q15699 326 aa12.56□□□□□ -0.4
LINC00963-207ENST00000454635 PLEKHM2Q8IWE5 1019 aa12.56□□□□□ -0.4
LINC00963-207ENST00000454635 ABRAQ8N0Z2 381 aa12.56□□□□□ -0.4
LINC00963-207ENST00000454635 ANKLE1Q8NAG6 615 aa12.56□□□□□ -0.4
LINC00963-207ENST00000454635 NEDD1Q8NHV4 660 aa12.56□□□□□ -0.4
LINC00963-207ENST00000454635 U2AF1L4Q8WU68 220 aaKnown RBP12.56□□□□□ -0.4
LINC00963-207ENST00000454635 SPATC1LQ9H0A9 340 aa12.56□□□□□ -0.4
LINC00963-207ENST00000454635 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.56□□□□□ -0.42e-6■■□□□ 13.3
LINC00963-207ENST00000454635 PORCNQ9H237 461 aa12.56□□□□□ -0.4
LINC00963-207ENST00000454635 PAK6Q9NQU5 681 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 855.7 ms