RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 CNGA1P29973 690 aa14.13□□□□□ -0.15
GARNL3-210ENST00000453030 BMP8BP34820 402 aa14.13□□□□□ -0.15
GARNL3-210ENST00000453030 LRRC26Q2I0M4 334 aa14.13□□□□□ -0.15
GARNL3-210ENST00000453030 SLFNL1Q499Z3 407 aa14.13□□□□□ -0.15
GARNL3-210ENST00000453030 LBX2Q6XYB7 198 aa14.13□□□□□ -0.15
GARNL3-210ENST00000453030 CLEC10AQ8IUN9 316 aa14.13□□□□□ -0.15
GARNL3-210ENST00000453030 NPLOC4Q8TAT6 608 aa14.13□□□□□ -0.15
GARNL3-210ENST00000453030 ARMT1Q9H993 441 aa14.13□□□□□ -0.15
GARNL3-210ENST00000453030 DCP1AQ9NPI6 582 aaPredicted RBP14.13□□□□□ -0.15
GARNL3-210ENST00000453030 COG6Q9Y2V7 657 aa14.13□□□□□ -0.15
GARNL3-210ENST00000453030 SMCHD1A6NHR9 2005 aa14.12□□□□□ -0.15
GARNL3-210ENST00000453030 MYH4Q9Y623 1939 aa14.12□□□□□ -0.15
GARNL3-210ENST00000453030 HMMRO75330 724 aa14.12□□□□□ -0.15
GARNL3-210ENST00000453030 MBD4O95243 580 aa14.12□□□□□ -0.15
GARNL3-210ENST00000453030 CYP2C19P33261 490 aa14.12□□□□□ -0.15
GARNL3-210ENST00000453030 ATP2B2Q01814 1243 aa14.12□□□□□ -0.15
GARNL3-210ENST00000453030 SAMD1Q6SPF0 538 aaPredicted RBP14.12□□□□□ -0.15
GARNL3-210ENST00000453030 TDHQ8IZJ6 230 aa14.12□□□□□ -0.15
GARNL3-210ENST00000453030 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.12□□□□□ -0.15
GARNL3-210ENST00000453030 DYNLL2Q96FJ2 89 aa14.12□□□□□ -0.15
GARNL3-210ENST00000453030 UBE2OQ9C0C9 1292 aaKnown RBP14.12□□□□□ -0.15
GARNL3-210ENST00000453030 DDX20Q9UHI6 824 aaKnown RBP14.12□□□□□ -0.15
GARNL3-210ENST00000453030 UNC80Q8N2C7 3258 aa14.12□□□□□ -0.15
GARNL3-210ENST00000453030 CUL9Q8IWT3 2517 aa14.11□□□□□ -0.15
GARNL3-210ENST00000453030 PRKAB2O43741 272 aa14.11□□□□□ -0.15
GARNL3-210ENST00000453030 MDM2Q00987 491 aaPredicted RBP14.11□□□□□ -0.15
GARNL3-210ENST00000453030 KIAA1755Q5JYT7 1200 aa14.11□□□□□ -0.15
GARNL3-210ENST00000453030 TMEM179Q6ZVK1 233 aa14.11□□□□□ -0.15
GARNL3-210ENST00000453030 SIRT2Q8IXJ6 389 aa14.11□□□□□ -0.15
GARNL3-210ENST00000453030 MOV10L1Q9BXT6 1211 aaKnown RBP14.11□□□□□ -0.15
GARNL3-210ENST00000453030 BOLA2Q9H3K6 86 aa14.11□□□□□ -0.15
GARNL3-210ENST00000453030 PAG1Q9NWQ8 432 aa14.11□□□□□ -0.15
GARNL3-210ENST00000453030 DDX19BQ9UMR2 479 aa14.11□□□□□ -0.15
GARNL3-210ENST00000453030 GREB1LQ9C091 1923 aaPredicted RBP14.11□□□□□ -0.15
GARNL3-210ENST00000453030 SMIM22K7EJ46 135 aa14.1□□□□□ -0.15
GARNL3-210ENST00000453030 CHGBP05060 677 aa14.1□□□□□ -0.15
GARNL3-210ENST00000453030 HOXC6P09630 235 aa14.1□□□□□ -0.15
GARNL3-210ENST00000453030 MS4A1P11836 297 aa14.1□□□□□ -0.15
GARNL3-210ENST00000453030 AKR1B1P15121 316 aa14.1□□□□□ -0.15
GARNL3-210ENST00000453030 ADORA2AP29274 412 aa14.1□□□□□ -0.15
GARNL3-210ENST00000453030 ADD2P35612 726 aa14.1□□□□□ -0.15
GARNL3-210ENST00000453030 ATN1P54259 1190 aaPredicted RBP14.1□□□□□ -0.15
GARNL3-210ENST00000453030 ICA1Q05084 483 aa14.1□□□□□ -0.15
GARNL3-210ENST00000453030 PLS1Q14651 629 aa14.1□□□□□ -0.15
GARNL3-210ENST00000453030 COG2Q14746 738 aa14.1□□□□□ -0.15
GARNL3-210ENST00000453030 DIEXFQ68CQ4 756 aaKnown RBP14.1□□□□□ -0.15
GARNL3-210ENST00000453030 Q7L0L9 218 aa14.1□□□□□ -0.15
GARNL3-210ENST00000453030 DPP9Q86TI2 863 aa14.1□□□□□ -0.15
GARNL3-210ENST00000453030 SPICE1Q8N0Z3 855 aa14.1□□□□□ -0.15
GARNL3-210ENST00000453030 TRPV1Q8NER1 839 aa14.1□□□□□ -0.15
GARNL3-210ENST00000453030 SENP6Q9GZR1 1112 aaPredicted RBP14.1□□□□□ -0.15
GARNL3-210ENST00000453030 SPATC1LQ9H0A9 340 aa14.1□□□□□ -0.15
GARNL3-210ENST00000453030 SWAP70Q9UH65 585 aa14.1□□□□□ -0.15
GARNL3-210ENST00000453030 CYP2D7A0A087X1C5 515 aa14.09□□□□□ -0.15
GARNL3-210ENST00000453030 MSCO60682 206 aa14.09□□□□□ -0.15
GARNL3-210ENST00000453030 FLOT1O75955 427 aa14.09□□□□□ -0.15
GARNL3-210ENST00000453030 CYBAP13498 195 aa14.09□□□□□ -0.15
GARNL3-210ENST00000453030 ERCC3P19447 782 aa14.09□□□□□ -0.15
GARNL3-210ENST00000453030 ANO1Q5XXA6 986 aa14.09□□□□□ -0.15
GARNL3-210ENST00000453030 RPAP2Q8IXW5 612 aaPredicted RBP14.09□□□□□ -0.15
GARNL3-210ENST00000453030 DEFB123Q8N688 67 aa14.09□□□□□ -0.15
GARNL3-210ENST00000453030 ATG4CQ96DT6 458 aa14.09□□□□□ -0.15
GARNL3-210ENST00000453030 ARHGEF10LQ9HCE6 1279 aa14.09□□□□□ -0.15
GARNL3-210ENST00000453030 ZBTB40Q9NUA8 1239 aa14.09□□□□□ -0.15
GARNL3-210ENST00000453030 RAB11FIP3O75154 756 aa14.08□□□□□ -0.16
GARNL3-210ENST00000453030 MYCNP04198 464 aaPredicted RBP14.08□□□□□ -0.16
GARNL3-210ENST00000453030 LRIT3Q3SXY7 679 aa14.08□□□□□ -0.16
GARNL3-210ENST00000453030 NCAPG2Q86XI2 1143 aa14.08□□□□□ -0.16
GARNL3-210ENST00000453030 SLC17A8Q8NDX2 589 aa14.08□□□□□ -0.16
GARNL3-210ENST00000453030 LPAR1Q92633 364 aa14.08□□□□□ -0.16
GARNL3-210ENST00000453030 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.08□□□□□ -0.16
GARNL3-210ENST00000453030 SH2D4AQ9H788 454 aa14.08□□□□□ -0.16
GARNL3-210ENST00000453030 HOXC10Q9NYD6 342 aa14.08□□□□□ -0.16
GARNL3-210ENST00000453030 MCM3APO60318 1980 aa14.08□□□□□ -0.16
GARNL3-210ENST00000453030 EYSQ5T1H1 3165 aa14.08□□□□□ -0.16
GARNL3-210ENST00000453030 DNM1LO00429 736 aa14.07□□□□□ -0.16
GARNL3-210ENST00000453030 ATP5JP18859 108 aa14.07□□□□□ -0.16
GARNL3-210ENST00000453030 DSG3P32926 999 aa14.07□□□□□ -0.16
GARNL3-210ENST00000453030 GJC2Q5T442 439 aaPredicted RBP14.07□□□□□ -0.16
GARNL3-210ENST00000453030 AMOTL1Q8IY63 956 aa14.07□□□□□ -0.16
GARNL3-210ENST00000453030 MB21D1Q8N884 522 aa14.07□□□□□ -0.16
GARNL3-210ENST00000453030 VCPKMTQ9H867 229 aa14.07□□□□□ -0.16
GARNL3-210ENST00000453030 ATP8A2Q9NTI2 1148 aa14.07□□□□□ -0.16
GARNL3-210ENST00000453030 CDH23Q9H251 3354 aa14.07□□□□□ -0.16
GARNL3-210ENST00000453030 USP17L12C9JPN9 530 aa14.06□□□□□ -0.16
GARNL3-210ENST00000453030 USP17L21D6R901 530 aa14.06□□□□□ -0.16
GARNL3-210ENST00000453030 RAD21O60216 631 aa14.06□□□□□ -0.16
GARNL3-210ENST00000453030 COBLO75128 1261 aa14.06□□□□□ -0.16
GARNL3-210ENST00000453030 CDK8P49336 464 aa14.06□□□□□ -0.16
GARNL3-210ENST00000453030 RTP1P59025 263 aa14.06□□□□□ -0.16
GARNL3-210ENST00000453030 C12orf60Q5U649 245 aa14.06□□□□□ -0.16
GARNL3-210ENST00000453030 OLFML2BQ68BL8 750 aa14.06□□□□□ -0.16
GARNL3-210ENST00000453030 SIAH1Q8IUQ4 282 aa14.06□□□□□ -0.16
GARNL3-210ENST00000453030 SHCBP1Q8NEM2 672 aa14.06□□□□□ -0.16
GARNL3-210ENST00000453030 DDRGK1Q96HY6 314 aa14.06□□□□□ -0.16
GARNL3-210ENST00000453030 HAUS7Q99871 368 aa14.06□□□□□ -0.16
GARNL3-210ENST00000453030 TMX2Q9Y320 296 aa14.06□□□□□ -0.16
GARNL3-210ENST00000453030 SLC4A4Q9Y6R1 1079 aa14.06□□□□□ -0.16
GARNL3-210ENST00000453030 KBTBD13C9JR72 458 aa14.05□□□□□ -0.16
GARNL3-210ENST00000453030 WDR46O15213 610 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms