RNA–Protein interactions for RNA: ENST00000451834.5

CNOT4-207, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNOT4, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-207ENST00000451834 HMMRO75330 724 aa9.38□□□□□ -0.91
CNOT4-207ENST00000451834 BAG4O95429 457 aaKnown RBP9.38□□□□□ -0.91
CNOT4-207ENST00000451834 OSBPP22059 807 aa9.38□□□□□ -0.91
CNOT4-207ENST00000451834 FOXD4L6Q3SYB3 417 aaPredicted RBP9.38□□□□□ -0.91
CNOT4-207ENST00000451834 FOXD4L3Q6VB84 417 aaPredicted RBP9.38□□□□□ -0.91
CNOT4-207ENST00000451834 ZBTB21Q9ULJ3 1066 aa9.38□□□□□ -0.91
CNOT4-207ENST00000451834 RABGAP1Q9Y3P9 1069 aa9.38□□□□□ -0.91
CNOT4-207ENST00000451834 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.38□□□□□ -0.91
CNOT4-207ENST00000451834 CLRN2A0PK11 232 aa9.38□□□□□ -0.91
CNOT4-207ENST00000451834 CST5P28325 142 aaPredicted RBP9.38□□□□□ -0.91
CNOT4-207ENST00000451834 MYRIPQ8NFW9 859 aa9.38□□□□□ -0.91
CNOT4-207ENST00000451834 ANKS1AQ92625 1134 aa9.38□□□□□ -0.91
CNOT4-207ENST00000451834 TTC12Q9H892 705 aaPredicted RBP9.38□□□□□ -0.91
CNOT4-207ENST00000451834 PRPF40AO75400 957 aaKnown RBP9.37□□□□□ -0.91
CNOT4-207ENST00000451834 GNAT2P19087 354 aa9.37□□□□□ -0.91
CNOT4-207ENST00000451834 MAMDC4Q6UXC1 1216 aa9.37□□□□□ -0.91
CNOT4-207ENST00000451834 SAMD3Q8N6K7 520 aa9.37□□□□□ -0.91
CNOT4-207ENST00000451834 SH3RF3Q8TEJ3 882 aaPredicted RBP9.37□□□□□ -0.91
CNOT4-207ENST00000451834 SCN10AQ9Y5Y9 1956 aa9.37□□□□□ -0.91
CNOT4-207ENST00000451834 TMEM265A0A087WTH1 108 aa9.37□□□□□ -0.91
CNOT4-207ENST00000451834 NBPF11Q86T75 865 aa9.37□□□□□ -0.91
CNOT4-207ENST00000451834 EFCC1Q9HA90 598 aa9.37□□□□□ -0.91
CNOT4-207ENST00000451834 INPP5BP32019 993 aa9.36□□□□□ -0.91
CNOT4-207ENST00000451834 SKOR2Q2VWA4 1001 aaPredicted RBP9.36□□□□□ -0.91
CNOT4-207ENST00000451834 VPS37DQ86XT2 251 aa9.36□□□□□ -0.91
CNOT4-207ENST00000451834 CD99L2Q8TCZ2 262 aa9.36□□□□□ -0.91
CNOT4-207ENST00000451834 DBNDD2Q9BQY9 259 aa9.36□□□□□ -0.91
CNOT4-207ENST00000451834 TMX2Q9Y320 296 aa9.36□□□□□ -0.91
CNOT4-207ENST00000451834 TCP10L2B9ZVM9 353 aa9.36□□□□□ -0.91
CNOT4-207ENST00000451834 CSPP1Q1MSJ5 1256 aa9.36□□□□□ -0.91
CNOT4-207ENST00000451834 ZSCAN25Q6NSZ9 544 aa9.36□□□□□ -0.91
CNOT4-207ENST00000451834 SIAH1Q8IUQ4 282 aa9.36□□□□□ -0.91
CNOT4-207ENST00000451834 PDCL2Q8N4E4 241 aa9.36□□□□□ -0.91
CNOT4-207ENST00000451834 PI4K2BQ8TCG2 481 aa9.36□□□□□ -0.91
CNOT4-207ENST00000451834 NYAP2Q9P242 653 aa9.36□□□□□ -0.91
CNOT4-207ENST00000451834 ARPP21Q9UBL0 812 aaPredicted RBP9.36□□□□□ -0.91
CNOT4-207ENST00000451834 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.36□□□□□ -0.91
CNOT4-207ENST00000451834 NID2Q14112 1375 aa9.36□□□□□ -0.91
CNOT4-207ENST00000451834 NAA30Q147X3 362 aaPredicted RBP9.36□□□□□ -0.91
CNOT4-207ENST00000451834 DIXDC1Q155Q3 683 aa9.36□□□□□ -0.91
CNOT4-207ENST00000451834 RBM26Q5T8P6 1007 aaKnown RBP9.36□□□□□ -0.91
CNOT4-207ENST00000451834 C12orf60Q5U649 245 aa9.36□□□□□ -0.91
CNOT4-207ENST00000451834 DZIP1Q86YF9 867 aaKnown RBP9.36□□□□□ -0.91
CNOT4-207ENST00000451834 EMILIN3Q9NT22 766 aa9.36□□□□□ -0.91
CNOT4-207ENST00000451834 PNMA2Q9UL42 364 aa9.36□□□□□ -0.91
CNOT4-207ENST00000451834 DNAJC25-GNG10A0A024R161 153 aa9.35□□□□□ -0.91
CNOT4-207ENST00000451834 TAF1CQ15572 869 aaPredicted RBP9.35□□□□□ -0.91
CNOT4-207ENST00000451834 KLHL40Q2TBA0 621 aa9.35□□□□□ -0.91
CNOT4-207ENST00000451834 PDLIM2Q96JY6 352 aa9.35□□□□□ -0.91
CNOT4-207ENST00000451834 DOCK3Q8IZD9 2030 aa9.35□□□□□ -0.91
CNOT4-207ENST00000451834 LOXHD1Q8IVV2 1947 aa9.35□□□□□ -0.91
CNOT4-207ENST00000451834 NAA16Q6N069 864 aaPredicted RBP9.35□□□□□ -0.91
CNOT4-207ENST00000451834 BTNL9Q6UXG8 535 aa9.35□□□□□ -0.91
CNOT4-207ENST00000451834 TTC6Q86TZ1 520 aa9.35□□□□□ -0.91
CNOT4-207ENST00000451834 PTCH2Q9Y6C5 1203 aa9.35□□□□□ -0.91
CNOT4-207ENST00000451834 SYNGAP1Q96PV0 1343 aa9.35□□□□□ -0.91
CNOT4-207ENST00000451834 HMGCRP04035 888 aa9.35□□□□□ -0.91
CNOT4-207ENST00000451834 TIMM10P62072 90 aa9.35□□□□□ -0.91
CNOT4-207ENST00000451834 KIF22Q14807 665 aa9.35□□□□□ -0.91
CNOT4-207ENST00000451834 TMEM179Q6ZVK1 233 aa9.35□□□□□ -0.91
CNOT4-207ENST00000451834 MTA3Q9BTC8 594 aa9.35□□□□□ -0.91
CNOT4-207ENST00000451834 STRNO43815 780 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 PDE6AP16499 860 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 JAG1P78504 1218 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 TKFCQ3LXA3 575 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 GPT2Q8TD30 523 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 APBA2Q99767 749 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 RBM47A0AV96 593 aaKnown RBP9.34□□□□□ -0.91
CNOT4-207ENST00000451834 USP17L15C9J2P7 530 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 USP17L13C9JLJ4 530 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 USP17L11C9JVI0 530 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 USP17L18D6R9N7 530 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 USP17L22D6RA61 530 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 USP17L17D6RBQ6 530 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 USP17L19D6RCP7 530 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 USP17L20D6RJB6 530 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 WDR46O15213 610 aaKnown RBP9.34□□□□□ -0.91
CNOT4-207ENST00000451834 MSCO60682 206 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 ZAP70P43403 619 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 PLCB2Q00722 1185 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 USP17L24Q0WX57 530 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 MAP3K12Q12852 859 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 RGS22Q8NE09 1264 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 MYH6P13533 1939 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 TRIM6-TRIM34B2RNG4 842 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 GOLGA6L22H0YM25 854 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 ORC4O43929 436 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 SGPL1O95470 568 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 TTC39AQ5SRH9 613 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 SMC5Q8IY18 1101 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 ZKSCAN4Q969J2 545 aaPredicted RBP9.34□□□□□ -0.91
CNOT4-207ENST00000451834 TSEN34Q9BSV6 310 aaKnown RBP9.34□□□□□ -0.91
CNOT4-207ENST00000451834 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.34□□□□□ -0.91
CNOT4-207ENST00000451834 TRIM34Q9BYJ4 488 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 DCP1AQ9NPI6 582 aaPredicted RBP9.34□□□□□ -0.91
CNOT4-207ENST00000451834 PICK1Q9NRD5 415 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 TMEM63CQ9P1W3 806 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 Q9Y3F1 56 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 KIF3AQ9Y496 699 aa9.34□□□□□ -0.91
CNOT4-207ENST00000451834 FRMPD4Q14CM0 1322 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms