RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 CCND3P30281 292 aaPredicted RBP11.96□□□□□ -0.49
LINC01238-204ENST00000451070 CCNA1P78396 465 aa11.96□□□□□ -0.49
LINC01238-204ENST00000451070 MAP2K5Q13163 448 aa11.96□□□□□ -0.49
LINC01238-204ENST00000451070 KIAA1755Q5JYT7 1200 aa11.96□□□□□ -0.49
LINC01238-204ENST00000451070 HAUS7Q99871 368 aa11.96□□□□□ -0.49
LINC01238-204ENST00000451070 NBPF3Q9H094 633 aa11.96□□□□□ -0.49
LINC01238-204ENST00000451070 FLRT1Q9NZU1 646 aa11.96□□□□□ -0.49
LINC01238-204ENST00000451070 PFASO15067 1338 aa11.95□□□□□ -0.5
LINC01238-204ENST00000451070 SLC15A5A6NIM6 579 aa11.95□□□□□ -0.5
LINC01238-204ENST00000451070 MPHOSPH10O00566 681 aaKnown RBP11.95□□□□□ -0.5
LINC01238-204ENST00000451070 PTPREP23469 700 aa11.95□□□□□ -0.5
LINC01238-204ENST00000451070 LHX8Q68G74 356 aa11.95□□□□□ -0.5
LINC01238-204ENST00000451070 CLEC10AQ8IUN9 316 aa11.95□□□□□ -0.5
LINC01238-204ENST00000451070 SIAH1Q8IUQ4 282 aa11.95□□□□□ -0.5
LINC01238-204ENST00000451070 C11orf49Q9H6J7 331 aa11.95□□□□□ -0.5
LINC01238-204ENST00000451070 ATP8A2Q9NTI2 1148 aa11.95□□□□□ -0.5
LINC01238-204ENST00000451070 STAP2Q9UGK3 403 aa11.95□□□□□ -0.5
LINC01238-204ENST00000451070 ZNF236Q9UL36 1845 aa11.95□□□□□ -0.5
LINC01238-204ENST00000451070 CYP2D7A0A087X1C5 515 aa11.94□□□□□ -0.5
LINC01238-204ENST00000451070 IGHA2P01877 340 aa11.94□□□□□ -0.5
LINC01238-204ENST00000451070 COL6A1P12109 1028 aa11.94□□□□□ -0.5
LINC01238-204ENST00000451070 AKR1B1P15121 316 aa11.94□□□□□ -0.5
LINC01238-204ENST00000451070 GRB14Q14449 540 aa11.94□□□□□ -0.5
LINC01238-204ENST00000451070 WDR78Q5VTH9 848 aa11.94□□□□□ -0.5
LINC01238-204ENST00000451070 TMEM179Q6ZVK1 233 aa11.94□□□□□ -0.5
LINC01238-204ENST00000451070 C7orf61Q8IZ16 206 aa11.94□□□□□ -0.5
LINC01238-204ENST00000451070 NPLOC4Q8TAT6 608 aa11.94□□□□□ -0.5
LINC01238-204ENST00000451070 GDF15Q99988 308 aa11.94□□□□□ -0.5
LINC01238-204ENST00000451070 CHMP4BQ9H444 224 aaKnown RBP11.94□□□□□ -0.5
LINC01238-204ENST00000451070 SWAP70Q9UH65 585 aa11.94□□□□□ -0.5
LINC01238-204ENST00000451070 ZMYND8Q9ULU4 1186 aaPredicted RBP11.94□□□□□ -0.5
LINC01238-204ENST00000451070 COL11A1P12107 1806 aaPredicted RBP11.93□□□□□ -0.5
LINC01238-204ENST00000451070 A0A1W2PPC1 479 aa11.93□□□□□ -0.5
LINC01238-204ENST00000451070 USP17L12C9JPN9 530 aa11.93□□□□□ -0.5
LINC01238-204ENST00000451070 USP17L21D6R901 530 aa11.93□□□□□ -0.5
LINC01238-204ENST00000451070 SOX1O00570 391 aaPredicted RBP11.93□□□□□ -0.5
LINC01238-204ENST00000451070 SMARCA5O60264 1052 aaPredicted RBP11.93□□□□□ -0.5
LINC01238-204ENST00000451070 GLRX3O76003 335 aaKnown RBP11.93□□□□□ -0.5
LINC01238-204ENST00000451070 HOXC6P09630 235 aa11.93□□□□□ -0.5
LINC01238-204ENST00000451070 CDK8P49336 464 aa11.93□□□□□ -0.5
LINC01238-204ENST00000451070 COG2Q14746 738 aa11.93□□□□□ -0.5
LINC01238-204ENST00000451070 UBE3CQ15386 1083 aa11.93□□□□□ -0.5
LINC01238-204ENST00000451070 C12orf60Q5U649 245 aa11.93□□□□□ -0.5
LINC01238-204ENST00000451070 MOV10L1Q9BXT6 1211 aaKnown RBP11.93□□□□□ -0.5
LINC01238-204ENST00000451070 LRRCC1Q9C099 1032 aa11.93□□□□□ -0.5
LINC01238-204ENST00000451070 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.93□□□□□ -0.5
LINC01238-204ENST00000451070 PUS7LQ9H0K6 701 aaKnown RBP11.93□□□□□ -0.5
LINC01238-204ENST00000451070 CWC22Q9HCG8 908 aaKnown RBP11.93□□□□□ -0.5
LINC01238-204ENST00000451070 DNAH12Q6ZR08 3092 aa11.93□□□□□ -0.5
LINC01238-204ENST00000451070 GREB1LQ9C091 1923 aaPredicted RBP11.93□□□□□ -0.5
LINC01238-204ENST00000451070 ZNFX1Q9P2E3 1918 aaKnown RBP11.93□□□□□ -0.5
LINC01238-204ENST00000451070 ICA1Q05084 483 aa11.92□□□□□ -0.5
LINC01238-204ENST00000451070 MFSD14CQ5VZR4 134 aa11.92□□□□□ -0.5
LINC01238-204ENST00000451070 C16orf86Q6ZW13 317 aa11.92□□□□□ -0.5
LINC01238-204ENST00000451070 TANGO6Q9C0B7 1094 aa11.92□□□□□ -0.5
LINC01238-204ENST00000451070 SPATC1LQ9H0A9 340 aa11.92□□□□□ -0.5
LINC01238-204ENST00000451070 HOXC10Q9NYD6 342 aa11.92□□□□□ -0.5
LINC01238-204ENST00000451070 TMX2Q9Y320 296 aa11.92□□□□□ -0.5
LINC01238-204ENST00000451070 IVNS1ABPQ9Y6Y0 642 aa11.92□□□□□ -0.5
LINC01238-204ENST00000451070 U3KPZ7 1027 aaPredicted RBP11.92□□□□□ -0.5
LINC01238-204ENST00000451070 SYN1P17600 705 aa11.91□□□□□ -0.5
LINC01238-204ENST00000451070 DSG3P32926 999 aa11.91□□□□□ -0.5
LINC01238-204ENST00000451070 CYP2C19P33261 490 aa11.91□□□□□ -0.5
LINC01238-204ENST00000451070 BMP8BP34820 402 aa11.91□□□□□ -0.5
LINC01238-204ENST00000451070 LRRC26Q2I0M4 334 aa11.91□□□□□ -0.5
LINC01238-204ENST00000451070 CTR9Q6PD62 1173 aa11.91□□□□□ -0.5
LINC01238-204ENST00000451070 SPICE1Q8N0Z3 855 aa11.91□□□□□ -0.5
LINC01238-204ENST00000451070 SHCBP1Q8NEM2 672 aa11.91□□□□□ -0.5
LINC01238-204ENST00000451070 TRPV1Q8NER1 839 aa11.91□□□□□ -0.5
LINC01238-204ENST00000451070 LPAR1Q92633 364 aa11.91□□□□□ -0.5
LINC01238-204ENST00000451070 ATG4CQ96DT6 458 aa11.91□□□□□ -0.5
LINC01238-204ENST00000451070 CCDC17Q96LX7 622 aa11.91□□□□□ -0.5
LINC01238-204ENST00000451070 VCPKMTQ9H867 229 aa11.91□□□□□ -0.5
LINC01238-204ENST00000451070 SLC4A4Q9Y6R1 1079 aa11.91□□□□□ -0.5
LINC01238-204ENST00000451070 COBLO75128 1261 aa11.9□□□□□ -0.5
LINC01238-204ENST00000451070 FLOT1O75955 427 aa11.9□□□□□ -0.5
LINC01238-204ENST00000451070 CYBAP13498 195 aa11.9□□□□□ -0.5
LINC01238-204ENST00000451070 ERCC3P19447 782 aa11.9□□□□□ -0.5
LINC01238-204ENST00000451070 ADORA2AP29274 412 aa11.9□□□□□ -0.5
LINC01238-204ENST00000451070 MAGEA10P43363 369 aaPredicted RBP11.9□□□□□ -0.5
LINC01238-204ENST00000451070 ATP2B2Q01814 1243 aa11.9□□□□□ -0.5
LINC01238-204ENST00000451070 MB21D1Q8N884 522 aa11.9□□□□□ -0.5
LINC01238-204ENST00000451070 LRCH3Q96II8 777 aa11.9□□□□□ -0.5
LINC01238-204ENST00000451070 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.9□□□□□ -0.5
LINC01238-204ENST00000451070 ARHGEF10LQ9HCE6 1279 aa11.9□□□□□ -0.5
LINC01238-204ENST00000451070 DDX20Q9UHI6 824 aaKnown RBP11.9□□□□□ -0.5
LINC01238-204ENST00000451070 SMCHD1A6NHR9 2005 aa11.89□□□□□ -0.51
LINC01238-204ENST00000451070 WDR46O15213 610 aaKnown RBP11.89□□□□□ -0.51
LINC01238-204ENST00000451070 STRNO43815 780 aa11.89□□□□□ -0.51
LINC01238-204ENST00000451070 EEF2P13639 858 aaKnown RBP11.89□□□□□ -0.51
LINC01238-204ENST00000451070 OLFML2BQ68BL8 750 aa11.89□□□□□ -0.51
LINC01238-204ENST00000451070 ZSCAN25Q6NSZ9 544 aa11.89□□□□□ -0.51
LINC01238-204ENST00000451070 SAMD1Q6SPF0 538 aaPredicted RBP11.89□□□□□ -0.51
LINC01238-204ENST00000451070 DPP9Q86TI2 863 aa11.89□□□□□ -0.51
LINC01238-204ENST00000451070 STRBPQ96SI9 672 aaKnown RBP11.89□□□□□ -0.51
LINC01238-204ENST00000451070 DCTPP1Q9H773 170 aa11.89□□□□□ -0.51
LINC01238-204ENST00000451070 SH2D4AQ9H788 454 aa11.89□□□□□ -0.51
LINC01238-204ENST00000451070 ECHDC1Q9NTX5 307 aa11.89□□□□□ -0.51
LINC01238-204ENST00000451070 FBXO28Q9NVF7 368 aa11.89□□□□□ -0.51
LINC01238-204ENST00000451070 ADAMTS5Q9UNA0 930 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms